Olab005722.1
Basic Information
- Insect
- Ormyrus labotus
- Gene Symbol
- retn
- Assembly
- GCA_035582975.1
- Location
- JAWWEO010000021.1:13011304-13016945[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-20 1.3e-16 61.4 0.0 13 89 8 82 3 82 0.93 2 2 1.9 8.2e+03 -2.0 0.0 5 21 201 220 199 268 0.57
Sequence Information
- Coding Sequence
- ATGATTTTCCTGAATCTCCTTATGCTGAGTTATGGCACGCCGATCAACAGACTGCCGATAATGGCGAAATCGGTGCTCGACCTCTTCGAGCTGTACAACCTGGTAATCGCTCGCGGTGGCCTCGTCGACGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAGGGACTGCACCTCCCGTCGAGCATAACCTCCGCCGCCTTCACACTGCGCACCCAATACATGAAATACCTGTACCCGTACGAGTGCGAGAAGAAGCACCTGTCCTCGCCGGCGGAGCTGCAGGCGGCGATCGACGGCAACCGGCGCGAGGGCCGCCGCAGCAACTACGGCAactacggcggcggcggcggctccgtcGACGGCCTCGTGCGCAGCCCGCACACCCCGGGCTCGCTCGCCTCCCTCCATCCGCTCTCGCTGGTCGCGGCGGCCGCCAGCGGCCAGCACCAGGTCGGGCCGCAGAGCCTCGTCAACGGGAGCGCCGCCCACACGCCGATGCCCCACCATCCGCACCATCCGCAACACCAGCAGGGTGGCGGCCTCGGGCAGCCACTCAATGCAGGCATGGCGCCGGAGATCGAGGTGCGCGTGGCCGAGTACATGAAGCAGCTGCAGCGGGAGATGGGCAGAAAGGCGACGGGCTCGCCGGTCCAGCACCACCTCCCGAGCAACCTGAGCCCCTCGCCGCCGCCCCAGGCATCGGCCGtgcgctcgccgccgccgacgtccCGCGAGCAGGCCGCCTTCCTCGAGATGTCCCGTCTGACCCTCTGGAACATGTACAACAACAACATTCACCCCGGCCTCGGCTACGCTCAGGCCCCCTCGCCGCCCCACGGATCGCACTCACCCCCGCCGCAGCCGATGAGCCCCGAACCGCAGAAGGAGGCACTCGACCTTGGATTGAGATCCTCACCGAGCTCATCGTCGACTCGCCACAGTCCGCCGTCATCCAACGGCAGCATGAACATCAAGCGCGAGGTGGACACCGTCGTTTCTCCCCACACTTCCGCCGCCAACAAGAGGCTCTGCAGGGACGAGGACAGTCCTCCAAGAGAGACTGTTCCTTCCGCTCTCCCAGGCACACACATCAAGATCGCAAACAGAGGCGACGGTCGCGATAACTCACTCGTAGTCAGTATGGAACTCAACGGAGTCATGTACCAAGGTGTGCTCTTCGCCCAGACAGACGGCAGCGTTGCTGCTAACAATAACGAGAACAAGGCCTCGACTCGCAACGTCGTCTCGTGA
- Protein Sequence
- MIFLNLLMLSYGTPINRLPIMAKSVLDLFELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKHLSSPAELQAAIDGNRREGRRSNYGNYGGGGGSVDGLVRSPHTPGSLASLHPLSLVAAAASGQHQVGPQSLVNGSAAHTPMPHHPHHPQHQQGGGLGQPLNAGMAPEIEVRVAEYMKQLQREMGRKATGSPVQHHLPSNLSPSPPPQASAVRSPPPTSREQAAFLEMSRLTLWNMYNNNIHPGLGYAQAPSPPHGSHSPPPQPMSPEPQKEALDLGLRSSPSSSSTRHSPPSSNGSMNIKREVDTVVSPHTSAANKRLCRDEDSPPRETVPSALPGTHIKIANRGDGRDNSLVVSMELNGVMYQGVLFAQTDGSVAANNNENKASTRNVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01113207;
- 90% Identity
- iTF_01112367;
- 80% Identity
- iTF_01112367;