Onit002037.1
Basic Information
- Insect
- Ormyrus nitidulus
- Gene Symbol
- retn_1
- Assembly
- GCA_900474335.1
- Location
- UCOL01000519.1:45642-51830[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-21 2.6e-17 63.7 0.0 14 89 4 77 2 77 0.95 2 2 1.9 8.3e+03 -2.0 0.0 5 21 200 219 198 268 0.56
Sequence Information
- Coding Sequence
- ATGCGAGCCCAGAGGAGAGgcaCGCCGATCAACAGACTGCCGATAATGGCGAAATCGGTGCTCGACCTCTTCGAGCTGTACAACCTGGTAATCGCTCGCGGTGGCCTCGTCGACGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAGGGACTGCACCTCCCGTCGAGCATAACCTCCGCCGCCTTCACACTGCGCACCCAATACATGAAATACCTGTACCCGTACGAGTGCGAGAAGAAGCACCTGTCCTCGCCGGCGGAGCTGCAGGCGGCGATCGACGGCAACCGGCGCGAGGGTCGCCGCAGCAACTACGGCAactacggcggcggcggcggctccgtcGACGGCCTCGTGCGCAGTCCGCACACCCCGGGCTCGCTCGCCTCCCTCCACCCGCTCTCCctggtggcggcggcggccagcGGCCAGCACCAGGTCGGGCCCCAGGGCCTCGTCAACGGGAGCGCCGCCCACACGCCGATGCCCCACCATCCGCACCATCCGCAACACCAGCAGGGTGGCGGCCTCGGCCAGCCACTCAATGCAGCTCTCTTTCCAGGCATGGCGCCGGAGATCGAGGTGCGCGTGGCCGAGTACATGAAGCAGCTGCAGCGGGAGATGGGCAGAAAGGCGACGGGCTCGCCGGTCCAGCACCACCTCCCGAGCAACCTGAGCCCCTCGCCGCCGCCCCAGGCCTCGGCGGtgcgctcgccgccgcccACGTCCCGCGAGCAGGCCGCCTTCCTCGAGATGTCCCGTCTGACCCTCTGGAACATGTACAACAACAACATTCACCCCGGCCTCGGTTACGCTCAGGCCGCCTCGCCGCCCCACGGATCGCACTCACCCCCGCCGCAGCCGATCAGCCCCGAGCCGCAGAAGGAGGCACTCGACCTTGGATTGAGATCCTCCCCGAGCTCATCGTCGACTCGCCACAGTCCGCCGTCATCCAACGGCAGCATGAACATCAAGCGCGAGATAGATACCGTCGTTTCTCCCCACACTTCCACCGCCAACAAGAGGCTCTGCAGGGACGAGGATAGTCCTCCAAGAGAGACTGTTACTTCCGCTCTCCCAGGCACACACATCAAGATCGAAAACAGAGGTGATGGTCGCGATAACTCGCTCGTAGTCAGTATGGAACTCAACGGAGTCATGTACCAAGGTGTGCTCTTCGCCCAGACAGACGGCAGCGTTGCTGCTAACAACAACGAGAACAAGGCCTCGACTCGCAACGTCGTCTCGTGA
- Protein Sequence
- MRAQRRGTPINRLPIMAKSVLDLFELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKHLSSPAELQAAIDGNRREGRRSNYGNYGGGGGSVDGLVRSPHTPGSLASLHPLSLVAAAASGQHQVGPQGLVNGSAAHTPMPHHPHHPQHQQGGGLGQPLNAALFPGMAPEIEVRVAEYMKQLQREMGRKATGSPVQHHLPSNLSPSPPPQASAVRSPPPTSREQAAFLEMSRLTLWNMYNNNIHPGLGYAQAASPPHGSHSPPPQPISPEPQKEALDLGLRSSPSSSSTRHSPPSSNGSMNIKREIDTVVSPHTSTANKRLCRDEDSPPRETVTSALPGTHIKIENRGDGRDNSLVVSMELNGVMYQGVLFAQTDGSVAANNNENKASTRNVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01113207;
- 90% Identity
- iTF_01112367;
- 80% Identity
- -