Olab010511.1
Basic Information
- Insect
- Ormyrus labotus
- Gene Symbol
- -
- Assembly
- GCA_035582975.1
- Location
- JAWWEO010000045.1:21396729-21403840[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-12 2e-09 37.7 0.0 1 39 366 405 366 409 0.90 2 4 1e-11 1.6e-08 34.8 0.0 2 39 421 458 420 461 0.94 3 4 1.4e-18 2.3e-15 56.7 0.0 2 45 476 520 475 520 0.97 4 4 1.6e-18 2.6e-15 56.5 0.1 1 42 527 569 527 570 0.97
Sequence Information
- Coding Sequence
- ATGAATGGAGCGCGCGAAATTGTTGTTGCTGATAATTGGGGTGTTCGTTTTCGGGGTGTGGGAGGAATTGGCCTTTCATCGCTGCTGAAGACGGCCGATCAGCTAAAGATCAAGGGCCTGTGCGAGTCGCCGGAGAGCAGGGAGGGCCCCTCGGTGAGCCTGAGCTCGCCGCCGCGCAACCCTACGGTCGGCGCCGGCCAGCCAGTCGGCTCGGCCTCGCCTCGGCTCAACTTCGCCAAGCTCAAGCGTCACCATCAGCGCTACAAGAGGCAGCGGGCCGCCTCGTTCGAGCCGCCGACGACCCCACTGCCGAGCGGCGCTCGCGGCCACAACCACCACCATCACCATCAGCACCTGAACCACAACAGCGCCTCCGGCTCCCACAGGCAGGACAACCCCGACAAGTACAAGGAGGAGGACTTTGTCGAGAGCTACGTGCGCGACTGCAACAAGGAGAACCGCCGAGACTGCTGGCCAGCTAAAGATGACGAGTGCATGGAGACGACAGCGACGACCACAACAGTAGTCCTGGACCAGTGCCaacgcggcggcagcggcaacggcggcggcggcggcggtggaggaggaggcggcggaggcggcggcggcggcccagTGGACAACAACAACAGCGGCTCGAACAGCAACGCTGCCGGTGCGGCGAGCAACAACAACGGTGACATGTTCTGTCACACAGGTCTCGGTCACTATGGGCACCATCCGGACCCGGCGGAGGTCGACCTGCCGCCGGAGACGCAGCCGACCCCGCCTAGCGCCACCCTAGTCGGCACCACCATCACCCACCTCAGGGATCCGGATCACCACACGACTGACATCCAGAACTGCGACAGCGTGAAGATAAAGTTCGAGACGCTGCACACGATGGACTCGTCGGACACGATCGACATCGACAGCCACATGTCCGACCGGGCGAGCGTCAGCTCGAAGAACGCCGACGACAACATGATGATGATCACGCCGGAGCTGCTGGGCCTGATGCCCTCGGGCAGCTCCGTGCACTCGGACTCGGGTGAGAACAACTCGCGCAGCCACTCGGGCCAGTCCGGCTCGCATCATCACGGTTCCAAGTCCTGGACGCAGGAGGACATGGACGCCGCGCTCGAGGCGCTCAGGAATCACGACATGAGTCTCACTAAAGCTTCCGCGACATTCGGCATCCCGTCGACGACACTGTGGCAGCGAGCGCACCGACTGGGCATCGACACCCCCAAGAAGGACGGACCGACGAAATCCTGGAGCGACGAGAGCCTGAACAACGCCCTGGACGCGCTGCGGACCGGCACGATCTCGGCGAACAAGGCCTCGAAGGCCTTCGGCATACCGTCGAGCACGCTCTACAAGATCGCGAGGCGGGAGGGCATCAGGCTGGCGGCGCCGTTCAACGCCAGCCCCACGACCTGGTCGCCAGCCGACCTCGACCGAGCCCTCGAGGCCATTCGCTCCGGTCAGACCTCCGTGCAGAGAGCCTCCACCGAGTTCGGCATACCCACAGGGACGCTTTACGGACGCTGCAAGCGCGAGGGCATCGAGCTCAGCAGGAGCAACCCCACGCCGTGGAGCGAGGACGCTATGACGGAGGCTCTCGAGGCTGTCAGGCTGGGGCACATGAGCATAAACCAAGCAGCGATCCACTACAACCTGCCGTACTCGTCCTTGTACGGTCGATTCAAGCGAGGCAAATACGAGGAGCCGGTGGTAAACGAGATGTCACAGGACGGCTCGTCTCAGCACTTCCACCAGAGTCCAACCCAGAATCACTCCTCGCCGCTCCCCGACCAAATGCCGTACCAGGGCAGCTGA
- Protein Sequence
- MNGAREIVVADNWGVRFRGVGGIGLSSLLKTADQLKIKGLCESPESREGPSVSLSSPPRNPTVGAGQPVGSASPRLNFAKLKRHHQRYKRQRAASFEPPTTPLPSGARGHNHHHHHQHLNHNSASGSHRQDNPDKYKEEDFVESYVRDCNKENRRDCWPAKDDECMETTATTTTVVLDQCQRGGSGNGGGGGGGGGGGGGGGGGPVDNNNSGSNSNAAGAASNNNGDMFCHTGLGHYGHHPDPAEVDLPPETQPTPPSATLVGTTITHLRDPDHHTTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNADDNMMMITPELLGLMPSGSSVHSDSGENNSRSHSGQSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGSSQHFHQSPTQNHSSPLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00304983;
- 90% Identity
- iTF_01110851; iTF_01112492; iTF_01113559; iTF_01113326; iTF_01111672;
- 80% Identity
- -