Ostr031276.1
Basic Information
- Insect
- Oligia strigilis
- Gene Symbol
- baz-2
- Assembly
- GCA_951800025.1
- Location
- OX637567.1:5185900-5223733[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-12 6.4e-09 36.3 0.0 3 75 633 708 631 710 0.89
Sequence Information
- Coding Sequence
- ATGGACAAGGAAGGGGGGGATGGCGGCGACGCGGCGGGCAAGCAGCCCCCCGACGGCCTGCTCGATGCTGCTAACCTATTTGGTGCATACTGGGGTCGCGATGGCGGCAGCGGTGGGGGCGCGGCGGCTGCGCAGGCGCAAGCACAAGCACAAGCGGCGCTCTTCGGCTTCGGGTCTCGCTACCCGCCCCCCACCACGCTCGGCGTGGCGGCCAATCAGGCAGCGTCCCTCGGGCTGCATCCAGCTGCCAGTGCAGCCTGGTGGTCGATGGCATCCCACCTAGCAGCTCAAGATTACCTGGCGCGTCTGCAGGCGTCAGGGTTAAACTTCCCACCCTTGGCGGACCCTTACGCCGCGCTGTCAGCTCTCTCCGGAGGCCAGGGGCTGAAGCAGCCGCAGAAACCTGGGAAGTTGTCTAGTCGGAATGAGAGGTCAGGCCGAAGCAGTACATCATCCAGCGCCTCCACAAAAGACAAGAGTCCATCGACTAGCAGTGCCAACTCGCAGAACATGAGATCTTCCTACGGTCTACCGAAGACTTCTTCTCCGTCCGCGATGCACCACTCTGCGTCTCTGTCGAGCCTGGCTTCCCTCAACAGTCTGGTGTCTGCTCCTCATCAGAGCAAGCCCAGTAGTAAGCCGTCTGCTGCGCCACAGCCAAGCAAAAAGCCTTCATCCTCGTCGTCGTCGAGCTCCAAGGGCAAGGAGCGCGAGCTGGCGCTGCTGCGCGGCGACCTCATGCTGGCGCAGGCGGCCGCGCACGGGGCCTACCACGCCgccgtcgccgccgccgccaaGGGGAAGAACATGTCACCGCTGTATCCATTCGGCATGCCGGGGTCTGATAAGGATGGTCGGCATGGTGGCATTGATTCGCTCACTGGCTTGCCTCATACCATACTCAGTGCTGCTTTAGAAGGCGGTGATCCTTCATCAGTGCTTGGTGGGGTACGTTTGCCTCCGGATACGGAAATTATCAAGTATACTTCCTCGTTAGCCGGGCCCAAGGCGGGTTCGGGCACTACGACCCGCGGCCGCAAGAAGACGATCTCGTTAGACCCGCCGCACGTCAGCGTGCATCCCGCCGACCGGAACGCGCCGATGCCCAGCAAACGGCCTAAACTTGACGAGTACGGCAACTCGCGGTCGTCAGTGGAAGTGATCCGGCTGCCCAACAAGCCGGACCGGCCCGGACACAACTCTATGTCCGGCACGCCCCCACCCAACCTGTCCGATTATGCAGGCATATCCCGAGAACTGCTGCAGACGATAGCTAGTCAGAGCGGCGTGAGCCTGGCCGCGCTGGAGCGCCAGCTCGCGGGCTCCACAGATGCAGGTCTCAACCTAAGCACTAAGATGGGCGAGGACTCTCCGTTAGACCTGGGCGTCAAGTCTTCAGGAATGGATGACGATGCACCGCTTAACCTGTCACTCAAACCTACTCCTGCGAGTTCGCAAGCCTCAGACGCTCTCTCGCGACTGACGTCATTGAGCAGTTCGCTCAACGCGTCCTCCAGCCATGACAGGATATCCCGTCGCAAGCCGGGCGCGAAGCCCCGCCGCGTGGCGCCGGAGATGAACCCCGTGCCCGACGCGCCGCGACCCAAGTCCAGCGGCAGCGAGGACAGTGAATCAGTAGCGGGGTGGGCAGGGCGAGAGGGTCGGCCACGCAACCTGGGCAGAGGAGTCAGCAAGCCTAAGAAGAACACTGTCGCTTCCCTATTGGCCCAGAGTAGGGCTTTGGGCCTAAGGCCTGCGCTGGCGCATCAATTGCTGGCTGAGACTGACCTGGAGAAACTAAAAGCGCTACTAGGCGAGACTGCGAGCACGGACTCGGAGTGTCCGTCGGACAGCTGTCCGTCCGACTCGGACGCGTCCGACACTAGTCGGAGACCCAACGATGCGCAACTTAGACTGCCTCTAGCGCTCGGTTGGAAACGCGTGACTGTGATCAAGGGACTCTCCCGTAACTGCAGCATTAAAGGCGACGTGACGTACTCGCCGCCCGACCCGCATGCGGGCATCACCATGCGGTCGTTACATGAAATACAAaattTCCTAGACACAAACCCATGTCCACCTCTGTCGACGGACAACTTCAGTTTCTCTGCGCGCACCGTGCTCGGAGAGTACATACAGCCAGCCAGCGATGTGGGCGAGCCGCTTGTGTATAACGAAAATGAGATCAATAAGAGATTGGAAGAAGCCCGTATCCTCGCCAGCGCAGGCGGGCGGCCCACGCCGCCGCCGCTGGACCGGCGCATGGAGCTGGCGCGCCTGCAGCAGGCCGCGCGCGACGCCCGGCGCGACGCCTCGCATCGCTCGCGGGACCAGGCCCGACTCGAAAGATCTGAGAAAGCGGAACTAGCGAAACGCGAGAAGGAAGCGAGAAGTCAACAGCTTTTAGAGCATATCAACAAGAATAGAACGCAGTTGACGATCGAGCCCCTCCCTACTGTCCCGAAAACCGGTATCGATGAATGGAAAACACCCGAGATAGTGATGGGACCAGCCACTAAGACGAATAAGGAACGCATTATGCCTCCTATCAGCCTCTCTCTAATACCGGTTAGCGGCCCCAAAGATTCCCAGAACTCCCCTATAAAAACTATAAAGTTCGACCAATCAGGATGGAAAGAAGAAATAGAAGAATATAATGCACTAGATAAAATGAAAGACTTCGCTGAAAAAGCGGCTTTTGATCTCCCAAAACGAAAAGACAATAAACAATACGACTTCACGTTAGTAAAATCAGCTGAAAAGCGCTTGAAAGCGCCCGACAAAGAGAACAATCTAGAAAAACTAATAGAGTCCTATTCAAGAATAACAGAATTCATAAACGGCTGTGATTGGTCGAAGCTACAAGGGGACAAGAAAACCGAAGACCCGAAATCGATAGAGCAAAAATATCTCGATGCGAAAAATGAGTTCATGTCCCAAAATCTGATGTTGATGCCAAAAGACAGTCCGAAATCTGTTCTAAAGGAAGTCATAGActtgagtgatgatgatgacattttgacagatataatgtcaaaaaaaatcagTAAAGGGACTTTTAATGTGGGCAAAGATGGCGCCCTGTCGATCTCAGTGCATCCCCTAGGCAAGGATACGTCATCGGTACgtgaaaaataa
- Protein Sequence
- MDKEGGDGGDAAGKQPPDGLLDAANLFGAYWGRDGGSGGGAAAAQAQAQAQAALFGFGSRYPPPTTLGVAANQAASLGLHPAASAAWWSMASHLAAQDYLARLQASGLNFPPLADPYAALSALSGGQGLKQPQKPGKLSSRNERSGRSSTSSSASTKDKSPSTSSANSQNMRSSYGLPKTSSPSAMHHSASLSSLASLNSLVSAPHQSKPSSKPSAAPQPSKKPSSSSSSSSKGKERELALLRGDLMLAQAAAHGAYHAAVAAAAKGKNMSPLYPFGMPGSDKDGRHGGIDSLTGLPHTILSAALEGGDPSSVLGGVRLPPDTEIIKYTSSLAGPKAGSGTTTRGRKKTISLDPPHVSVHPADRNAPMPSKRPKLDEYGNSRSSVEVIRLPNKPDRPGHNSMSGTPPPNLSDYAGISRELLQTIASQSGVSLAALERQLAGSTDAGLNLSTKMGEDSPLDLGVKSSGMDDDAPLNLSLKPTPASSQASDALSRLTSLSSSLNASSSHDRISRRKPGAKPRRVAPEMNPVPDAPRPKSSGSEDSESVAGWAGREGRPRNLGRGVSKPKKNTVASLLAQSRALGLRPALAHQLLAETDLEKLKALLGETASTDSECPSDSCPSDSDASDTSRRPNDAQLRLPLALGWKRVTVIKGLSRNCSIKGDVTYSPPDPHAGITMRSLHEIQNFLDTNPCPPLSTDNFSFSARTVLGEYIQPASDVGEPLVYNENEINKRLEEARILASAGGRPTPPPLDRRMELARLQQAARDARRDASHRSRDQARLERSEKAELAKREKEARSQQLLEHINKNRTQLTIEPLPTVPKTGIDEWKTPEIVMGPATKTNKERIMPPISLSLIPVSGPKDSQNSPIKTIKFDQSGWKEEIEEYNALDKMKDFAEKAAFDLPKRKDNKQYDFTLVKSAEKRLKAPDKENNLEKLIESYSRITEFINGCDWSKLQGDKKTEDPKSIEQKYLDAKNEFMSQNLMLMPKDSPKSVLKEVIDLSDDDDILTDIMSKKISKGTFNVGKDGALSISVHPLGKDTSSVREK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01094064; iTF_01119361; iTF_01502113; iTF_01247010; iTF_01338786; iTF_00906180; iTF_00924709; iTF_01425957; iTF_00622854; iTF_01192742; iTF_01340139; iTF_00123404; iTF_00449133; iTF_00809166; iTF_00274455; iTF_01085264; iTF_00771953; iTF_00758194; iTF_00037843; iTF_00850771; iTF_00973811; iTF_00726388; iTF_01173303; iTF_00120536; iTF_00667512; iTF_01179514; iTF_00622023; iTF_00147484; iTF_01332732; iTF_01166719;
- 90% Identity
- iTF_00809166;
- 80% Identity
- iTF_01094064; iTF_01093125;