Oiva040031.1
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- -
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000027.1:8130354-8132926[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.8e-10 2e-07 32.1 0.0 5 40 1 36 1 39 0.92
Sequence Information
- Coding Sequence
- ATGCAAGCTGCTATCACTGCAGTGCGAGAGGGACGGTTCAAAATCAGAGAAGCTGCACGACATTTCGGCGTGCCCCATAGCACtctgataaataaattaaaaggcaGAGTTCCAGGAGTAAGAAAAATGGGACGTGATACGTATTTTACAGAAAACGAAGAAAATCTTCTAGTGAGATATATCATTGCAAGTGCTAAGAAGGGAATACCGATAAAAAGAAATACCTTAATAGAaacggtgaaaaaaatattagatgACGACGAGAGAGTGACGCCATTCAAAAATAATCGGCCAGGCAAGAAATGGGTCACGTTATTTTGCAATCGACACCCGGAAATAACTGAGAAACAGGCTGAAGGGATCTCCACAGCACGAGCTAATGTATCTGAAAAAGACATCAAAAGCTGGCACCAGTCCCTTAAAGAGTATTTAGTCGAAGAAAATGCTTTGGATATATTGGAAGAGCCCAAACGCATATTTAATGCAGACGAATCAGGTTTCCAGACATGCCCAGAGTCAGGCAAAGTTCTAGGGCCAGTTGGCATGAAAAACTTCTACCAAATAAAAGCTGGAAAAGAGAAAGAGCAATTGACTGTTATGGTCACTATCAATGCTGCAGGTCAAGTAGTTACGCCCATGATCGTTTACCCCCTAGTTCGCATTTCAAAAGAAATAGCAATAAATGTTCCGAAAAACTGGGGGATAGGCAAATCTCCCAAAGGTTGGATGACCGGACCTTTATACTACGAATACATTGCTAATATTCTAGATCCATGGGTGAAGGCGAACAACATAAAGAAACCTATTTTGCTCCTAATAGATGGGCATCGCTCTCACTTGACGTTACAAGTATCGCAGTACTGTGCTGAAAATCAAATTATAGCCTACGCTCTCTTTCCCAACTCAACGCACATTTCTCAGCCAGCGGACGTATCCGTATTCAAATGTATGAAAAGTGGctggaaaaataccgtttgcGAGTTCAAAGAAAGAACTGGGAATAGACAGATTACCCGTGCTGGATTCGCACCCTTGCTCGCCAAAGTTTTTAAAGACAAAGTCACTCCAGATGTCATTAAGAATGGTTTTAAAAGATGTGGGATCTATCCATTTGACGTCACTGCTGTAGATTTGACAAGGTGCATGGATAATGAAACTAGAAAAAATGCACCCGTGTCAACTCCACCACTTGAGATCAGAGTGGAGACACTCTTGCTGTTTGAGTCTTTTATGAGACGAGGCCGTGTTGAACAATTTAGACGGAGTAATGAACAGTGGGAAGGGGAGGAAACCGCCAAGGAATTATTCTATGTGTGGAAAAAGTTTCGTCAGCACTGTTTGTCGGAGGGTTTCCCGTCCAGTTCAGAAGATGTTAGATCACCATCACCACAGAACCAGATCACTCTGCCGGTAGAAACGAAAATTCCCACAACGTGCAGTACACTAGTCTCGAAGACATCATTTCTACCAGAAGAGTTCAAGACTTCCTCAAGATGTAATACGCCGGTTTCAGTGGCACCACATCTTCAAGAAGAGTCCGAAGCTTCCACCAGATGTAGTACTCCGATAtctaaaacacatttttttccAGAACCGGCAGAAACTCCGACCAGAATTTGTACTCCGGTTTCAAACGCACATCTTCCAGAGGAGTCCGAAACTACCACCCGATCTTGTACTCCAGTCTCAAAGACACTCAATATTTCAGAGAAGTCCGGAACTCCAACTCAGATCTTGAAGTCACCTAATAACAGTTTTGAATGCCATACTCCAATAATCCAAACTGATAACATTGGTGTTATGACACCCCAAGCAGTTGAAAAGAAATCATTTACTTCATCGAGCAATCTTCTTCTCTTAGCTGAGAAACAAAAACAAaaaagagtccGAATCATTACAAGCGATACCAGTGATTCCAGTGAAGCGATATCAGATGAGGAACCAGAACAGAGGATAGAAAAACACATAACCGATGATAAAACAGAATCTGAGAAAGAAAACAAGGAAGAGGCATCTTGTGCTAGTGTGGATTTAAATAGTTTGGAGGTGGGACATTTTGTAATATTTGTTTATGAAGGTGCATACTTTGTTGGCAAAATCGATTCAATTTGTGAAGAGGGAGCATTGATAAATTCAATGCATCAGTCGCTCAAAAGTTGGAAGTGGCCAGAGAAAGAGGACTCGATTTTATACAAACTCGATGATATTAAGGAAAAAATTCAACCTCCACAACTAATACACCATAAACGGGGACTTTATCATGTTCCcgaatttgaaaaatatagagaatatatttaa
- Protein Sequence
- MQAAITAVREGRFKIREAARHFGVPHSTLINKLKGRVPGVRKMGRDTYFTENEENLLVRYIIASAKKGIPIKRNTLIETVKKILDDDERVTPFKNNRPGKKWVTLFCNRHPEITEKQAEGISTARANVSEKDIKSWHQSLKEYLVEENALDILEEPKRIFNADESGFQTCPESGKVLGPVGMKNFYQIKAGKEKEQLTVMVTINAAGQVVTPMIVYPLVRISKEIAINVPKNWGIGKSPKGWMTGPLYYEYIANILDPWVKANNIKKPILLLIDGHRSHLTLQVSQYCAENQIIAYALFPNSTHISQPADVSVFKCMKSGWKNTVCEFKERTGNRQITRAGFAPLLAKVFKDKVTPDVIKNGFKRCGIYPFDVTAVDLTRCMDNETRKNAPVSTPPLEIRVETLLLFESFMRRGRVEQFRRSNEQWEGEETAKELFYVWKKFRQHCLSEGFPSSSEDVRSPSPQNQITLPVETKIPTTCSTLVSKTSFLPEEFKTSSRCNTPVSVAPHLQEESEASTRCSTPISKTHFFPEPAETPTRICTPVSNAHLPEESETTTRSCTPVSKTLNISEKSGTPTQILKSPNNSFECHTPIIQTDNIGVMTPQAVEKKSFTSSSNLLLLAEKQKQKRVRIITSDTSDSSEAISDEEPEQRIEKHITDDKTESEKENKEEASCASVDLNSLEVGHFVIFVYEGAYFVGKIDSICEEGALINSMHQSLKSWKWPEKEDSILYKLDDIKEKIQPPQLIHHKRGLYHVPEFEKYREYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01091677; iTF_00352993; iTF_00695425; iTF_01091705; iTF_01091706; iTF_00695420; iTF_01091710; iTF_01091711; iTF_01091712; iTF_00354015; iTF_00744544; iTF_00744542;
- 90% Identity
- -
- 80% Identity
- -