Eedi021269.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Euphydryas editha
Gene Symbol
-
Assembly
GCA_036937285.1
Location
JAUPFZ010000016.1:4634947-4638219[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-10 6.6e-08 33.5 0.0 4 40 20 56 18 61 0.87

Sequence Information

Coding Sequence
ATGGCTCCACGAAAGAAAAAACTTGAAGGCGCGAAAATTTTGCGCTATCCTGATTCCGCAATGCGAGCTGCTATCACTGCAGTGCGAGAGGGACGGTTCAAAATCAGAGAAGCTGCACGACATTTCGGCGTGCCCCATAGCACTctgataaataaagtaaaaggcAGAGTTCCAGAAGTAAGAAAAATGGGACGTGATACGTATTTTACAGAAAACGAAGAAAATCTTCTAGTGAAATATATCATTGCAAATGCTAAGAAGGGAATACCGATAAAAAGAAATACCTTAATAGAAAcggtgaaaaaaatattagatgacgACGAGAGAGTGACGCCATTCAAAAATAATCGGCCAGGCAAGAAATGGGTCACGTTATTTTGCAATCGACACCCGGAAATAACTGAGAAACAAGCTGAAGGGATCTCCACAGCACGAGCTAATGTATCTGAAAACGACATTAAAAGCTGGCACCAATCCCTTAAAGAGTACTTAGTCGAAGAAAATGCTTTGGATATATTGGAAGAGCCCAAACGCATATTTAATGCAGACGAATCAGGTTTTCAGACATGCCCAGAGTCAGGCAAAGTGCTAGGGCCAGTTGGCATGAAAAACTTCTACCAAATAAAAGCTGGAAAAGAGAAAGAGCAACTGACTGTTATGGTCACTATCAATGCTGCGGGTCAAGTAGTTCCGCCCATGATCGTTTACCCCCTAGTTCGCATTTCAAAAGAAATAGCAATAAATGTTCCGGAAAACTGGGGGATAGGCAAATCTCCCAAAGGTTGGATGACCGGACCTTTATACTTCGAATACATTGCTAATATTCTAGATCCATGGGTGAAGGCGAACAACATAAAGAAACCTATTTTGCTCCTAATAGATGGGCATCGCTCTCACTTGACGTTACAAGTATCGCAGTACTGTGCTGAAAATCAAATTATAGCCTACGCTCTCTTTCCCAACTCAACGCACATTTCTCAGCCAGCGGACGTATCTGTATTCAAATGTATCAAAAGTGGCTGGAAAAATATCGTTTGCGAGTTCAAAGAAAGAACAGGGAATAGACAGGTTACCCGTGCTGGATTCGCACCCTTGCTCGCTAAAGTTTTTAAAGACAAAGTCACTCCAGATGTCATTACGAATGGTTTCAAAAGATGTGGGATATATCCATTTGACGTTACTGCTTTAGATTTGACAAGGTGTATGGATAATGAAACTAGAAAAATTGCACCTGTGTCAACTCCACAACGTGAAATCAGAGTGGAGACACTCTTGCTGTTTGAGTCTTTTATGAGACGAGGCCGTGTTGAACAATTTAGACAGAGTAATGAACAGTGGGAAGGAGAGGAAACTGCTAAGGAATTATTCTATGTGTGGAAAAAATTTCGTCAGCACTGTTTGTCGGAGGGTTTCCCGTCCAGTGCAGAAAATGTCAGATCACCATCACCACAGAACCAGATCACTCTCGCGGTAGAAACGAAAATTTTCACAACGTGCAGTACACCAGCCTCGAAAACATCATTTCTACCAGAAGAGTTCAAGACTTCCTCAAGATGTAGTACGCCGGTTTCAGTGGCACCAGATCTTCAAGAAGAGTCCGAAGCTTCCACCAGATGTAGTACTCCAATATCTAAAACACAATTTGTTCCAGAACTGGCAGAAACTCCGACCAGAATTTGCACTCCGGTTTCAAACGCACATCTTCCAGAGGAGTCCGAAACTACCACCCGATCTTGTACTGCAGTCTCAAAGACACTACATATTTCAGAGAAGTCCGGAACTCCAACTCAGATCTTGAAGTCACCTAATAACCGTTTTGAATGCCATACTCCAATAATCCAAACAAATAACATTGATGTTATGACACCCACAGCAGCTGAAAAGAAATCATTTACTTCATCGAGCAATCTTCTTCTCTTAGCTGAGAAACAAAAACAGGTCAGTCCTGCTTTTGGAAAGCATTTAATATGGCCCTCAGATTCTCcgataaaaaaacctaaaaaagaaaGACTGCCATTCGCCACCACTTCCAAAAAATGGCAAGATTATTGGCTGtggaaagaaaataaaaaagacgaacaaaatagaaaaacagAAATAAGAAAGCGTGAacgagaagaaaaaaaaattcataaaagtaaacaaatacctaaaaaaagcacaaaaaaagaaattaaagccGAGTTGATCACTAAAATAACcaccaaaaaaaagaaaagagtcCGAATCATTACAAGCGACACCAGTGATACCAGTGAAGCGATATCAGATGAGGAACCAGAACAGAGGATAGAACAACACATAAACGATGATAAAACAGAATCTGAGAAAGAAAACGAGGAAGAGGCATCTTGTGCTAGTGTGGATTTGAAAAGTTTTGAGGTGGgacattttgtaatatttgtttatgaagGTGCATACTTTGTTGGCAAAATCGATTCAATTTGTGAAGAGGGAGCATTGATCAATTCAATGCATCAGTCGCTCAAAAGTTGGAAGTGGCCAGAGAAAGAGGACTTGATTTTATACAAACTCGATGATATTAAGGAAAAAATTCAACCTCCACAACTAATACACCAAAAACGGGGACTTTATCAAGTTCCCGAGTTTGAAAAATAtagagaatatatttaa
Protein Sequence
MAPRKKKLEGAKILRYPDSAMRAAITAVREGRFKIREAARHFGVPHSTLINKVKGRVPEVRKMGRDTYFTENEENLLVKYIIANAKKGIPIKRNTLIETVKKILDDDERVTPFKNNRPGKKWVTLFCNRHPEITEKQAEGISTARANVSENDIKSWHQSLKEYLVEENALDILEEPKRIFNADESGFQTCPESGKVLGPVGMKNFYQIKAGKEKEQLTVMVTINAAGQVVPPMIVYPLVRISKEIAINVPENWGIGKSPKGWMTGPLYFEYIANILDPWVKANNIKKPILLLIDGHRSHLTLQVSQYCAENQIIAYALFPNSTHISQPADVSVFKCIKSGWKNIVCEFKERTGNRQVTRAGFAPLLAKVFKDKVTPDVITNGFKRCGIYPFDVTALDLTRCMDNETRKIAPVSTPQREIRVETLLLFESFMRRGRVEQFRQSNEQWEGEETAKELFYVWKKFRQHCLSEGFPSSAENVRSPSPQNQITLAVETKIFTTCSTPASKTSFLPEEFKTSSRCSTPVSVAPDLQEESEASTRCSTPISKTQFVPELAETPTRICTPVSNAHLPEESETTTRSCTAVSKTLHISEKSGTPTQILKSPNNRFECHTPIIQTNNIDVMTPTAAEKKSFTSSSNLLLLAEKQKQVSPAFGKHLIWPSDSPIKKPKKERLPFATTSKKWQDYWLWKENKKDEQNRKTEIRKREREEKKIHKSKQIPKKSTKKEIKAELITKITTKKKKRVRIITSDTSDTSEAISDEEPEQRIEQHINDDKTESEKENEEEASCASVDLKSFEVGHFVIFVYEGAYFVGKIDSICEEGALINSMHQSLKSWKWPEKEDLILYKLDDIKEKIQPPQLIHQKRGLYQVPEFEKYREYI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01091703;
90% Identity
iTF_00744544;
80% Identity
-