Basic Information

Insect: Odynerus spinipes
Gene Symbol: GFI1B
Assembly: GCA_032403825.1
Location: JAIFRP010000042.1:989375-994163[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.19 12 6.3 1.4 1 23 301 323 301 323 0.91

2 12 0.00015 0.0096 16.1 1.9 1 23 328 352 328 352 0.92

3 12 0.00014 0.0088 16.2 0.2 2 23 421 443 420 443 0.95

4 12 8.9e-07 5.6e-05 23.1 0.4 1 23 449 471 449 471 0.97

5 12 0.0032 0.2 11.9 0.1 1 23 480 503 480 503 0.89

6 12 2.5e-07 1.6e-05 24.9 3.6 1 23 509 531 509 531 0.98

7 12 2.8e-06 0.00018 21.5 1.0 1 23 537 559 537 559 0.98

8 12 3.4e-05 0.0022 18.1 2.0 1 23 565 587 565 587 0.97

9 12 1.4e-08 9.1e-07 28.8 1.8 1 23 593 615 593 615 0.99

10 12 1.2e-05 0.00075 19.6 5.7 1 23 621 643 621 643 0.98

11 12 1.2e-05 0.00074 19.6 1.6 1 23 677 699 677 699 0.98

12 12 2.7e-07 1.7e-05 24.8 1.5 1 23 705 727 705 727 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.19	12	6.3	1.4	1	23	301	323	301	323	0.91
2	12	0.00015	0.0096	16.1	1.9	1	23	328	352	328	352	0.92
3	12	0.00014	0.0088	16.2	0.2	2	23	421	443	420	443	0.95
4	12	8.9e-07	5.6e-05	23.1	0.4	1	23	449	471	449	471	0.97
5	12	0.0032	0.2	11.9	0.1	1	23	480	503	480	503	0.89
6	12	2.5e-07	1.6e-05	24.9	3.6	1	23	509	531	509	531	0.98
7	12	2.8e-06	0.00018	21.5	1.0	1	23	537	559	537	559	0.98
8	12	3.4e-05	0.0022	18.1	2.0	1	23	565	587	565	587	0.97
9	12	1.4e-08	9.1e-07	28.8	1.8	1	23	593	615	593	615	0.99
10	12	1.2e-05	0.00075	19.6	5.7	1	23	621	643	621	643	0.98
11	12	1.2e-05	0.00074	19.6	1.6	1	23	677	699	677	699	0.98
12	12	2.7e-07	1.7e-05	24.8	1.5	1	23	705	727	705	727	0.98

Sequence Information

Coding Sequence: ATGGCGGGGGTCCGTCTGTATGATTCTACTATTTGTCGGCTATGCGCAGAAGATAATGGCAATGGAGAATTATTGTACAGGGGTGAGGGTGATGAACCCGATTTAAGTTCTATGGTGAATCGTTATTTACCATTAAAGATTCGAGATGATGGTAAATTACCCAGAACAATTTGTCCTGGCTGTAATATTCAGCTGGAGGCTACTGTACAATTTTTTGAACTATTGGTGGATGGTCAACGAAAAATCAGGGAAATGTGGAAACATCAGGTGGAGTCACAGAGAAAAGCAGAAAGGGAACGTGTACGTGctgaaaaacaaaatacaGAGCTGAGTGTGGAGACATCAGAATTGGATGTTGTACAGAACAATGAAGATCAGTTGGAgcaacaaataattattaatgTGATGCCTGATGGATCATTATACACGACAGAACATGAAATGAGTTTACAAATGGAAGGTTTAAGCAAACCCAGACGAAAAAGAGGTCGACCTCCCAAAGTTCATACTGATGTGGAATCAAAGGTCACAATAAAAGAAGACATCATAGAAGGAGTAAGTCAAGGTGAAGAAGATAAGCAAGAAGAGGAGATTGACGAAGTAGATGGTGATGGTAGACGTCGTAGAAAACGTAAAGTTCCTAAAAGatttatgGAAGCTGTTCAAGGCaaagaattagaaagaatatttaagGAAGAAGGTGTCatagatgaagaagaggatgaagaggcTGATCATTTTGAAGATTctgaagaaagaataaatgtaTCAGTTCCAGATGGTCAAGAAGAAATAATTGGACATTTAGAAACTGAGGAAGGAAAGGATTTAGGAGAATTAGTAATTGTAAATCGTGGGAGAGGTCGTGGTAGACCAAAATTACGTCGtcgcaaaaataaatttacttgtCAACTGTGTGGTAGAGGTTTCCTGCAACGCAGCAGATATATTGTACACAAAAGTTTTCATAAAGGAGTAAAGTATGAATGTAGAGAATGTAAGAAGCTTTTTACAAACAAGGACAACTTTGCATTGCATCAAAAAATGACACAGCATACAGGATGTGGTATTACAGAAATTAGCGAGGAacatgataataatattcagAACCCTGTAATTGAAAATACAAATTCTGCATCTAATAATCCATTAccaaataatacaaataatgtaGAAACTACATTCACAAATAATCAGGATATGGACATAACTACAGAAATTTCAGATACAAATGTAGCAAATAATTCTGATAAAAGCATAGTATGTGAACAATGTGATAAAACATTTCAGACAAAAGAATCATACGAATTACATGTCAAAGTAGTTCATGAAGGTGAAAAGCCATTTGCgtgtaatatttgtaataaaagttttGCTTATCAAACCAATTTGAAAGGACACATGCTAATACACGACGGAAATAAATCAGATAAAGGGTATCCTTGTGATATTTGTGGAAAAGTACTAAACCATCCAAGTTCTGTTGTATATCATAAAGAAGCTGAACACAATAATGGTCGCCGTTTTGTATGTAACAAATgtggaaaaagttttaaacACAAACAGTTATTACAACGTCACCAACTTGTACACTCTGATGATCGACCCTATGTATGCAAATCTTGTAATGCTAGTTTTAAAACAAAggcaaatttaattaatcatcaGTCTACACACactggagaaaagaaatatttttgtgaaatatgtGGTCAGCAGTTTGCTCATAAAACTAGTCTGACTTTACATTACAGGTGGCATACCGGTCACAAGCCATATACTTGTGAAGTATGTCATAAGAGTTTTTCTCAAAATGGTAATCTTCAAGAGCATATGCGTATACATACTGGAGAAAAACCATACTGTTGTGATTATTGTGGACGTAAATTCACAACTTCGTCACAATTTAAGTTACATGTTAAACGTCATACTGGTGAGCGCCCATGGAAGTGTGAATTTTGCGCCAAGTGTTTCCTACACAAGGATACATGGAAATGTCACGTACGTAGACATAAAGGAGAAAGACCGTTTCAGTGTGCACATTGCAACCGTGGATTTACAGAACAATGGGCATTAAAAAAGCATCTTCGACTACATACAGgtgAAAAACCATATTCTTGTGATGTATGTGGGAAAGCTTTTGCTGATTGTTCTAACTTAACAAAACATAAAAAgGTGCAcagagaaaataaagttttagCATTAGGTGAGATACCTGAAGGTTCTGCAGTTGGTGAAGTATGGCAGATTTTACCAAGTTCCCAAGAAGCAGATGAAAATTCACTAAGTGATCAAACTGCTCAAGTTATAACAGCAGAAGAAACATCTGCAGATGGAAtacaacaaattatttatgtttcatATCAAGATCCTGATGATCCTAATTTATCAAGGACATTACATTttgtTGATGCAAGCATGATgcgtgaaaaagaaggaatggTAAACACTCCAGGGCAATCTTTACCTCATTTAGatgttgaaaatgaaattatctcTGAACAAGCACATAATACAGCCAACACTTCAGATGAACAAATAGATATGGAATTATCAGAACCAGATCTACAATtacaaattaCAGATGAAGAGGGTAATCCAATTCCACTTTCCATACAAGATGCAAGACAATTGTTATCACAGGGACAATTTGTTAGTCAGTTAAACGATGGTCAAACTATCAGAGTTCATTCAGGTGTAATTACTCAAGAACTTGCAGGGTCTTTAGGTGTCCATGTAAATCAGAATGCTAATGTATCAACAGTGAATAATACTGCAGTCCATGAAGTAGCTAAAACAAGTTCAATATCAACTATACAAACAGATGCAGAAGCAATTGTTAAAGCATTAGAAgATGAAGATACAGATGCAACAGCAGTTGCTACTATAAACCAAATGGGAGGAGAAGAACAGACGGAAATAACAGATGGACAACAGGCTATTGAATTTACAACGCAAGATGGACAAAAAGTCCGACTTGTTACTTCATACCATGTTGATCCAATGCAAGTTGCTTCAGAGTACCTGactattgtataa
Protein Sequence: MAGVRLYDSTICRLCAEDNGNGELLYRGEGDEPDLSSMVNRYLPLKIRDDGKLPRTICPGCNIQLEATVQFFELLVDGQRKIREMWKHQVESQRKAERERVRAEKQNTELSVETSELDVVQNNEDQLEQQIIINVMPDGSLYTTEHEMSLQMEGLSKPRRKRGRPPKVHTDVESKVTIKEDIIEGVSQGEEDKQEEEIDEVDGDGRRRRKRKVPKRFMEAVQGKELERIFKEEGVIDEEEDEEADHFEDSEERINVSVPDGQEEIIGHLETEEGKDLGELVIVNRGRGRGRPKLRRRKNKFTCQLCGRGFLQRSRYIVHKSFHKGVKYECRECKKLFTNKDNFALHQKMTQHTGCGITEISEEHDNNIQNPVIENTNSASNNPLPNNTNNVETTFTNNQDMDITTEISDTNVANNSDKSIVCEQCDKTFQTKESYELHVKVVHEGEKPFACNICNKSFAYQTNLKGHMLIHDGNKSDKGYPCDICGKVLNHPSSVVYHKEAEHNNGRRFVCNKCGKSFKHKQLLQRHQLVHSDDRPYVCKSCNASFKTKANLINHQSTHTGEKKYFCEICGQQFAHKTSLTLHYRWHTGHKPYTCEVCHKSFSQNGNLQEHMRIHTGEKPYCCDYCGRKFTTSSQFKLHVKRHTGERPWKCEFCAKCFLHKDTWKCHVRRHKGERPFQCAHCNRGFTEQWALKKHLRLHTGEKPYSCDVCGKAFADCSNLTKHKKVHRENKVLALGEIPEGSAVGEVWQILPSSQEADENSLSDQTAQVITAEETSADGIQQIIYVSYQDPDDPNLSRTLHFVDASMMREKEGMVNTPGQSLPHLDVENEIISEQAHNTANTSDEQIDMELSEPDLQLQITDEEGNPIPLSIQDARQLLSQGQFVSQLNDGQTIRVHSGVITQELAGSLGVHVNQNANVSTVNNTAVHEVAKTSSISTIQTDAEAIVKALEDEDTDATAVATINQMGGEEQTEITDGQQAIEFTTQDGQKVRLVTSYHVDPMQVASEYLTIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01512327; iTF_01512965; iTF_01514959; iTF_01513625; iTF_01514303; iTF_01255858; iTF_00393747;
90% Identity: iTF_01512965;
80% Identity: -