Pper016366.2
Basic Information
- Insect
- Priocnemis perturbator
- Gene Symbol
- -
- Assembly
- GCA_963942575.1
- Location
- OZ012652.1:7494210-7498686[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.2 20 6.3 1.4 1 23 306 328 306 328 0.91 2 12 8.2e-05 0.0081 17.0 2.8 1 23 333 357 333 357 0.94 3 12 0.86 85 4.3 1.0 1 23 424 448 424 448 0.91 4 12 1.8e-06 0.00018 22.2 2.9 1 23 454 476 454 476 0.99 5 12 0.0034 0.34 11.9 0.1 1 23 485 508 485 508 0.89 6 12 2.6e-07 2.6e-05 24.9 3.6 1 23 514 536 514 536 0.98 7 12 1.6e-05 0.0016 19.2 0.5 1 23 542 564 542 564 0.98 8 12 3.6e-05 0.0036 18.1 2.0 1 23 570 592 570 592 0.97 9 12 1.6e-08 1.6e-06 28.7 1.8 1 23 598 620 598 620 0.99 10 12 1.2e-05 0.0012 19.6 5.7 1 23 626 648 626 648 0.98 11 12 1.2e-05 0.0012 19.6 1.6 1 23 682 704 682 704 0.98 12 12 2.8e-07 2.8e-05 24.8 1.5 1 23 710 732 710 732 0.98
Sequence Information
- Coding Sequence
- ATGGTGGATGTCCGTCTTTATGACTCCACTATTTGTCGGTTATGCGCCGAAGACAATGGTAACGGGGAATTATTGTACGCGCACGACGGCGACGACCCCGATTTGAGTACCATGGTGAATCGTTATTTGCCGCTGAAGGTCAGAGACGATGGGAAATTACCCAGAACAATTTGTCCAGGCTGTAACATACAGCTGGAGGCGACAGTACAGTTTTTTGAATTACTGGTTGATGGACAGCGTAAGATTCGTGACATGTGGAAAGTCCAAGTTGAAAATCAACGTAAAGCACAACGAGACCGCGTGCGTGCCGAAAGAGAGAATACTGAACTGGCTACGGAGACACCTGAATTGGATAATATAGCACAAAACAACGAGACTGAACAGTTTGAACAACAAATTATTATTAAAATAATGCCTGATGGTTCAATGTATGCAGCTGAAAACGAAATAAGTTTACAGATGGAAGGTCTAAGTAAGCCGAGGCGCAAAAGAGGTCGTCCACCAAAAGTTCACACAGAAGTGGATGCTAAGGTGGCACTACCTAGAAAAGAAGAAATAATACCAGAGGGAGTGTGTCAAGAGGAGGAGGACAAACAtgaggaggaggtggaagagGTAGATGGTGACGGAAGACGACGCCGAAAACGTAAAGTACCAAAAAGGTTTATGGAAGCTGTTCAGGGAAAAGAATTGGAAAGAATCTTCAAAGAAGAAGGCGTAATAGATGAGGAGGATGAGGAAGAACCAGATCATTTTGAAGATTCTGAGGAACGACTTAATGTAGCTATTCCAGATGGGCAAGAAGAAATAATAGGTCATTTGGAGACGGAAGAAGGGAAGGATTTAGGCGAACTAGTAATTGTAAACAGAGGAAGGGGACGGGGGAGGCCGAAACTTCGACGACGAAAAAATAAATTTACATGTCAATTGTGCGGCAGAGGTTTCTTACAGCGTAGTCGATACATCGTGCACaaGAGTTTCCACAAGGGAGTGAAATACGAATGTTCCCAGTGCAAGAAATTGTTCACGAATAAAGATAATTTCATGCTGCATCAAAAAACAAGTCAGCATACCGGTGGCGGTCTCACTGAGAATCCAGAGGAACACGACGTGCAAGTTCAAGAATCGTCAGTGGATCTTCAGAATGCACCACTTGTTGAAGAACAAGTCGATGGTGACACTGCACTGAACACACTTACAATTGAGAAAGATTCCGAAAAGCCTGTGGTTGACCCGAATATCAACGGAGATGATATAGTCGATAAGACTTTCACGTGCAACCAATGTATTGACAAACATTTCCCAACGAAGCAAGCCTACGAATTACACGTTAAGGTAGTTCACGAGGGTGAAAAACCGTTTACATGTAATATTTGTAATAAAAGTTTTGCCTATCACACCAACTTGAAGGGACACATGTTAACTCATGAGGGCGTTAAAAACGATAAAGGATATCCTTGCGATATCTGCGGAAAGGTACTAAATCATCCAAGTTCCGTTGTGTATCACAAAGAAGCAGAGCACAACAACGGCCGTCGTTTTGTGTGCAATAAGTGCGGGAAGAGTTTCAAGCACAAACAATTATTGCAGAGACATCAGCTTGTTCATTCGGACGACAGACCTTATGTCTGTAAGGCGTGTAGCGCCAGTTTCAAAACAAAGGCAAATCTTATAAACCATCAGTCGACGCATACCGGTGAAAAGAAGTACTTCTGCGAGATATGCGGGCAGCAGTTTGCGCATAAAACTAGTCTCACGTTACATTACAGGTGGCACACCGGCCACAAACCGTACACATGTGACGTTTGTCACAAAAGCTTTTCGCAGAACGGAAATCTCCAAGAGCATATGCGCATACATACCGGTGAGAAACCGTATTGTTGTGATTATTGCGGTCGTAAATTTACGACTTCTTCGCAGTTCAAGCTGCACGTTAAGCGTCATACAGGTGAACGGCCGTGGAAGTGTGAATTTTGCGCAAAATGCTTCTTGCACAAAGATACCTGGAAATGTCATGTACGGAGGCACAAAGGAGAGCGTCCCTTTCAATGTGCCCACTGTAATCGCGGCTTTACGGAGCAATGGGCTCTGAAGAAGCATCTTCGTCTCCATACTGGTGAAAAGCCGTATTCTTGCGATGTATGTGGCAAGGCATTTGCCGACTGTTCGAATCTAACAAAACATAAAAAGGTTCACAGAGACAATAAAGTTTTAACGATGGCCGACGCGTCCGAAGGTTCGGCCATTGGAGAAGTGTGGCAAATTTTGCCGAGTACTCAGGAGGAAGATGAAAATTCGCTTAGCGATCAGATGGCGCAAGTGATAGCAACCGACGAAGCATCTGGGGATGGAATACCTCAGATTATTTACGTTTCGTACCAAGATCCTGATGACCCTAATCAATCGCGAACCTTACATTTCGTCGATGCTGGTATGATGCGAGAGAAAGGAGGAATTGCTGCTACAACGGCTCAGTCGTTACCAAGGTTGGATGTAGACAATGACGAAATCATTCCTGAACAATCTCATGGAAGCACGAATAACGGTAACAATGGACGAATGGAGATGGAATTAGCGGAACCGGATTTACAACTTCAGATTACCGATGAAGAAGGCAATCCGATTCCACTTTCCATACACGATGCTCGACAGTTGTTATCTCAAGGACAATTTGTCAGTCAGCTTAATGACGGACAAACAATTAGAGTGCATTCGGGGGTAATTTCTCAAGAACTCGCAAATTCGTTGAGCGTACACGTTAATCAGCACAACGAAATCGAAGGAGTAAACGCTACAGCTATGGACGATAGAGTTAAATCTACAGAAGCAATATCCAATGATGCAGAAGCAATTGTCAAGGCTCTTGAGGACGAAGATACCGACGCAACGACAGTAGCGACAATAAATCAGATGGGAGCTGAAGAACAAACGGGTATATCCGATGGTGAACAAGCCATTGAGTTTACCACGCAGGACGGGCAAAAGTTGCGTCTTGTTACATCGTACCACGTTGATCCAATGCAGCTTGCGTCCGAGTACCTGACTATTGTATAA
- Protein Sequence
- MVDVRLYDSTICRLCAEDNGNGELLYAHDGDDPDLSTMVNRYLPLKVRDDGKLPRTICPGCNIQLEATVQFFELLVDGQRKIRDMWKVQVENQRKAQRDRVRAERENTELATETPELDNIAQNNETEQFEQQIIIKIMPDGSMYAAENEISLQMEGLSKPRRKRGRPPKVHTEVDAKVALPRKEEIIPEGVCQEEEDKHEEEVEEVDGDGRRRRKRKVPKRFMEAVQGKELERIFKEEGVIDEEDEEEPDHFEDSEERLNVAIPDGQEEIIGHLETEEGKDLGELVIVNRGRGRGRPKLRRRKNKFTCQLCGRGFLQRSRYIVHKSFHKGVKYECSQCKKLFTNKDNFMLHQKTSQHTGGGLTENPEEHDVQVQESSVDLQNAPLVEEQVDGDTALNTLTIEKDSEKPVVDPNINGDDIVDKTFTCNQCIDKHFPTKQAYELHVKVVHEGEKPFTCNICNKSFAYHTNLKGHMLTHEGVKNDKGYPCDICGKVLNHPSSVVYHKEAEHNNGRRFVCNKCGKSFKHKQLLQRHQLVHSDDRPYVCKACSASFKTKANLINHQSTHTGEKKYFCEICGQQFAHKTSLTLHYRWHTGHKPYTCDVCHKSFSQNGNLQEHMRIHTGEKPYCCDYCGRKFTTSSQFKLHVKRHTGERPWKCEFCAKCFLHKDTWKCHVRRHKGERPFQCAHCNRGFTEQWALKKHLRLHTGEKPYSCDVCGKAFADCSNLTKHKKVHRDNKVLTMADASEGSAIGEVWQILPSTQEEDENSLSDQMAQVIATDEASGDGIPQIIYVSYQDPDDPNQSRTLHFVDAGMMREKGGIAATTAQSLPRLDVDNDEIIPEQSHGSTNNGNNGRMEMELAEPDLQLQITDEEGNPIPLSIHDARQLLSQGQFVSQLNDGQTIRVHSGVISQELANSLSVHVNQHNEIEGVNATAMDDRVKSTEAISNDAEAIVKALEDEDTDATTVATINQMGAEEQTGISDGEQAIEFTTQDGQKLRLVTSYHVDPMQLASEYLTIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01090139;
- 90% Identity
- iTF_00393747;
- 80% Identity
- -