Basic Information

Insect: Odynerus spinipes
Gene Symbol: -
Assembly: GCA_032403825.1
Location: JAIFRP010000034.1:467359-470285[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00019 0.012 15.8 5.4 2 23 403 424 402 424 0.97

2 15 0.044 2.8 8.4 5.8 1 23 430 453 430 453 0.96

3 15 4.6e-06 0.00029 20.9 1.7 2 23 549 570 548 570 0.97

4 15 4.6e-06 0.00029 20.9 2.7 1 23 576 598 576 598 0.98

5 15 0.051 3.2 8.1 1.9 1 23 604 626 604 626 0.98

6 15 1.1e-06 7.1e-05 22.8 1.4 1 23 641 663 641 663 0.98

7 15 8.2e-07 5.2e-05 23.2 1.1 1 23 669 691 669 691 0.97

8 15 7.8e-06 0.0005 20.1 1.9 1 23 697 719 697 719 0.98

9 15 0.00091 0.058 13.6 0.2 1 23 725 747 725 747 0.99

10 15 7e-06 0.00044 20.3 0.3 1 23 753 776 753 776 0.94

11 15 2.1e-05 0.0013 18.8 1.3 1 23 782 804 782 804 0.98

12 15 0.00045 0.029 14.6 4.7 1 23 810 832 810 832 0.98

13 15 3.7e-06 0.00024 21.2 0.2 1 23 838 861 838 861 0.96

14 15 4.5e-06 0.00028 20.9 0.6 1 23 867 889 867 889 0.96

15 15 4e-06 0.00025 21.1 4.5 1 23 895 917 895 917 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00019	0.012	15.8	5.4	2	23	403	424	402	424	0.97
2	15	0.044	2.8	8.4	5.8	1	23	430	453	430	453	0.96
3	15	4.6e-06	0.00029	20.9	1.7	2	23	549	570	548	570	0.97
4	15	4.6e-06	0.00029	20.9	2.7	1	23	576	598	576	598	0.98
5	15	0.051	3.2	8.1	1.9	1	23	604	626	604	626	0.98
6	15	1.1e-06	7.1e-05	22.8	1.4	1	23	641	663	641	663	0.98
7	15	8.2e-07	5.2e-05	23.2	1.1	1	23	669	691	669	691	0.97
8	15	7.8e-06	0.0005	20.1	1.9	1	23	697	719	697	719	0.98
9	15	0.00091	0.058	13.6	0.2	1	23	725	747	725	747	0.99
10	15	7e-06	0.00044	20.3	0.3	1	23	753	776	753	776	0.94
11	15	2.1e-05	0.0013	18.8	1.3	1	23	782	804	782	804	0.98
12	15	0.00045	0.029	14.6	4.7	1	23	810	832	810	832	0.98
13	15	3.7e-06	0.00024	21.2	0.2	1	23	838	861	838	861	0.96
14	15	4.5e-06	0.00028	20.9	0.6	1	23	867	889	867	889	0.96
15	15	4e-06	0.00025	21.1	4.5	1	23	895	917	895	917	0.99

Sequence Information

Coding Sequence: ATGATAGAAATGGATAAAAAGCTTTCTATAGATACAGATTGGAATTCTGGaagcatatatatacaaagttcattaaatcatttttcaatcAGCAATAAAGATAATCACAATATAGtatccataaaaaaagaagcagactTACAAGGGAAAAAACACAGTCTTGAAGCCTCGCAGAATATGAAACATTCTCAAAATTCTATGAATAAAGAAAcggatataataaattacgaattaGCTTCACAATCAGATACAATAACAACGAGCTATAAGTCACAGTCTATAAATTCTGTACCAAATAAAACTGTTACTacttattatgaaaatatacatacaaatatagAAGCTAGAAGTGTACATGAAGCATGTCGCAGAGGTCAAATTGATGTTATAGAAATGCCAATAGaacaaacatatttttacaaatacttCTTGGTGTATGAAGACTTACCATcaaaatttgttgttttacATGCTTTACACAGTAATACGGCAAAAGAAGTAgcaaacaaattattaaatatattagcAATCATTGGAGCTCCACAAGTTTTACAAAGTGGAAATGGGCGTAATTTTGCTGAAGAAGTTGTCAGAGAATTACGTATTTTAtggaaagattttattatactacatggaaatgtatgtaaatgtgAAGAGAATAATAGagatttcaaaaatttattaaaatgttggttaaataaaaatcctgGAAAAACATGGTACGAAGGcttaaaatttatacaaatttttcaaaattccacATATCGTTGTCGAAATGGTAAAATACCATGTGATATATTATTTGGGCAAAACATCCATCAGGAGTTCCAAAAGCTAATCATCACAAAAAATTCAACAAATGACATGTGGACAGAAGAAGAATGGATAAGtaatacattaaataaaaaaaaaagtaatagtaGTACAGttgataatttctttcatacttctgaaaatataatttctgtaaatgtaaatgatacagataaagaaaatgataatTGCCGTAGTGAATGTGATGAATTGTTACCTAATGATCACAAAAATAATCATGATGAGTCTCTTCAATCTTATAAAGACTCAAATAACTTTAAATTTGTTAGTGTAAAAAGTGAAACATTTTTGGATAATCTGCAGATGGAAGATTCAATGTGTACAGAAACAAATGTTACTGAAGAATGTAACTCTCATGTAAACCAGAATCtaatatgtaaaatttgtcacaaaaaatatatgaaattaggacatttaaaaaatcatatgaagactcatattaaaaaaagacaatttAATTGCacattatgtaataaaacattCCATATGTTGAAGTTTTATGAGAAACATATGCAACAATTTCATGAgaattttcaacaaattaaCAGTCATGCAAATCGTACAAGGaatgataaaatttcaaacaaGTGtactaatataaatattagtaaaaaagaagatacagaAACAGAAGGAATTCCAAAGATAACCAATTCAACCATTAAATCTCaacaaaatagtaaaatattgttaaatcatacaaataaatgtattagatctataaaaaaatcgaatcttATTAATGGGAAACGATTTtctaggaaaaaagaagaaagtagaataTCTAGATTGAATGGAAATCCAACATTAGAATGTTCATATTGTAAACAAAAGTTCAGTTTTCCTAGTGTATTAAAAAGACATATGCGTTCCCATACAAATGAAAGGCCTTATGTTTGTAAAATATGCAACAAAAGCTTTAAGCAATTAGGTCATCTTAGTCAACATTCGTTGACACACAAAGATTACAGATCCTTCCAATGTGCAATATGTTGTATTAAGTTTGAATCTCTAGATTTACTTAAAACTCATTCTCAAACACATCAAGGTGAATcaatattaaaatcaaaagaaatttatcgtcTTTTTGAATGTGATAATTGTAAGAAAGTTTTTACGACGAAGAGTGTGCTAGAACGTCATATATTTACTCACACACACGAGCGTCAATTTGCATGTAAAATATGTGGTAAACGATTTAAACAAGCTGGTCATGTAAAATCTCATATGTTAGTTCATACTGGAGAACGAAAGTTTGAGTGCACTATTTGCTCTAAGAGATTCAGTTTatcaaattcattaaaaaaacatatgtacattCATAATGGTGAAAAACCATATCAATGTGATGTATGTGGAGCACGATTtctagagaaaagaaatcttaATGGTCATCTTATGACACATACAAATGAAAGACCATTTTCTTGCAAGATATGTGGTAAACGATATACATTAGCAGATACGCTACGTCGGCATATCAGTGCTGCTCATGAAGACGGACGAACATACCAATGTGAAATTTGtgcaaaaatgtttaaacagCTTGCACATTTGTCTGTTCATAAGAAAGTACATAACGATGAACGTCCCTTTCAATGTCATCTCtgtgaaaaaaatttcaaacataaaaatgttttaaaatctcATTTAGCAATTCATGCAAATATTCGACCTTTTGAGTGTGATATTTGTAAGGCAACATTTGTTAGAAAAACCAACTTGCAGACACATATAGCATCAGCTCATATGAATGAACGTCCATATGTTTGTACAATTTGTGGTAAacgttttaaacaaataagCCATTTGAATGGTCATGTTGTCGTTCACAGTAATTCGATGCCTTATCAATGTGATTTTTGCGATCGTCGTTGTAATAGATTGGACAATCTAAAGAAACACATGCGTCTTCATACAAAAGACAAAGAATAA
Protein Sequence: MIEMDKKLSIDTDWNSGSIYIQSSLNHFSISNKDNHNIVSIKKEADLQGKKHSLEASQNMKHSQNSMNKETDIINYELASQSDTITTSYKSQSINSVPNKTVTTYYENIHTNIEARSVHEACRRGQIDVIEMPIEQTYFYKYFLVYEDLPSKFVVLHALHSNTAKEVANKLLNILAIIGAPQVLQSGNGRNFAEEVVRELRILWKDFIILHGNVCKCEENNRDFKNLLKCWLNKNPGKTWYEGLKFIQIFQNSTYRCRNGKIPCDILFGQNIHQEFQKLIITKNSTNDMWTEEEWISNTLNKKKSNSSTVDNFFHTSENIISVNVNDTDKENDNCRSECDELLPNDHKNNHDESLQSYKDSNNFKFVSVKSETFLDNLQMEDSMCTETNVTEECNSHVNQNLICKICHKKYMKLGHLKNHMKTHIKKRQFNCTLCNKTFHMLKFYEKHMQQFHENFQQINSHANRTRNDKISNKCTNINISKKEDTETEGIPKITNSTIKSQQNSKILLNHTNKCIRSIKKSNLINGKRFSRKKEESRISRLNGNPTLECSYCKQKFSFPSVLKRHMRSHTNERPYVCKICNKSFKQLGHLSQHSLTHKDYRSFQCAICCIKFESLDLLKTHSQTHQGESILKSKEIYRLFECDNCKKVFTTKSVLERHIFTHTHERQFACKICGKRFKQAGHVKSHMLVHTGERKFECTICSKRFSLSNSLKKHMYIHNGEKPYQCDVCGARFLEKRNLNGHLMTHTNERPFSCKICGKRYTLADTLRRHISAAHEDGRTYQCEICAKMFKQLAHLSVHKKVHNDERPFQCHLCEKNFKHKNVLKSHLAIHANIRPFECDICKATFVRKTNLQTHIASAHMNERPYVCTICGKRFKQISHLNGHVVVHSNSMPYQCDFCDRRCNRLDNLKKHMRLHTKDKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01233137; iTF_01235172; iTF_01233803; iTF_01232527; iTF_01234493; iTF_01512320; iTF_01514953; iTF_01513616; iTF_01514296; iTF_01512960;
90% Identity: -
80% Identity: -