Nio019389.1
Basic Information
- Insect
- Nymphalis io
- Gene Symbol
- kn
- Assembly
- GCA_905147045.1
- Location
- LR989907.1:3983647-3992341[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-124 4.9e-120 402.1 0.0 205 387 1 200 1 203 1.00 2 2 5.9e-11 7.7e-07 28.3 5.1 420 564 209 353 201 364 0.75
Sequence Information
- Coding Sequence
- ATGAGAAGGTTTCAAGTGGTGATATCAACGCAAGTCATGGTCGACGGTCCACTGCTGGCGATATCGGACAACATGTTCGTTCACAACAACAGTAAACACGGGAGACGAGCGAAGCGACTCGATCCGTCTGAAGGTATTGACGCCGCGCCCGAGCCTAATTCGGGGCTATACCCACCGTTGCCTGTAGCAACGCCATGCATCAAAGCAATATCTCCGAGCGAAGGCTGGACGTCAGGGGGTTCTACGGTCATAATAGTTGGGGATAACTTTTTCGATGGACTCCAAGTCGTATTCGGAACTATGTTAGTTTGGAGCGAGCTTATAACGTCACACGCGATTAGAGTGCAAACACCGCCGCGACACATACCAGGCGTGGTGGAAGTTACTCTTTCGTACAAAAGCAAGCAGTTCTGTAAGGGGGCGCCTGGAAGATTCGTTTATGTTTCTCTCAACGAGCCGACAATAGATTACGGCTTCCAGAGACTACAGAAACTTATACCGAGACATCCGGGCGACCCTGAAAAACTGCCCAAGGAAATAATACTGAAGCGAGCTGCAGATTTAGCGGAGGCTTTGTATTCTATGCCCCGTAACAACCAACTGGGGCTCGGGGCGCCGCGCTCGCCGCCCGCCAGTATGCCATTCAACTCCTACACGGGACAGCTGGCTGTCAGTGTACAGGACACTGCCACATCGCAGTGGACTGAAGAGGAGTACGCGCGCAGCGGCGGCTCGGTGTCGCCGCGCTACTGCTCGGCCGCGTCCACGCCGCACGCGCCCGCCTACGCGCCGCAGCACTACCCCGCGCCGCCCGCCGCGCTCTTCAACACGTCCTCGCTGTCTCTAGGACCGTACCATCCGGCGAACATGAACGGACATATATCGTCTGAACACTATAACGTGTATAATACGAAAGAAAGCGAGTATTACGCTGAAAGAAATGGCGAGTGTAAGAATGAATGTACCGTAAACACTCATACGAAATGCAGTGACGGACTTGGCAAAGGGAAGCCTCGAAGTGCGTTCGCAGTCGTCAGAAATAGTCCACCGCGTAATTTACAACATCAAAATTGGCAACATCTCGCCGTCCAGTGTTAG
- Protein Sequence
- MRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGIDAAPEPNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTATSQWTEEEYARSGGSVSPRYCSAASTPHAPAYAPQHYPAPPAALFNTSSLSLGPYHPANMNGHISSEHYNVYNTKESEYYAERNGECKNECTVNTHTKCSDGLGKGKPRSAFAVVRNSPPRNLQHQNWQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00984815;
- 90% Identity
- iTF_01080517; iTF_01079681; iTF_01506953; iTF_01507852; iTF_00824494; iTF_00796311; iTF_00695264; iTF_00984815; iTF_00985785;
- 80% Identity
- -