Nurt021175.1
Basic Information
- Insect
- Nymphalis urticae
- Gene Symbol
- kn_1
- Assembly
- GCA_905147175.1
- Location
- LR989994.1:3979520-3988048[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-123 8.7e-119 398.1 0.0 205 387 1 204 1 207 0.99 2 2 2.3e-11 3.2e-07 29.7 4.8 420 566 213 359 205 368 0.75
Sequence Information
- Coding Sequence
- ATGAGAAGGTTTCAAGTGGTGATATCAACGCAGGTCATGGTCGACGGTCCACTGCTGGCGATATCGGACAACATGTTCGTTCACAACAACAGTAAACACGGGAGACGAGCGAAGCGACTCGATCCGTCTGAAGGTATTGACGCCGCGCCCGAGCCTAATTGTACGTTTTCGGGGCTATACCCACCGTTGCCTGTAGCAACGCCATGCATCAAAGCAATATCTCCGAGCGAAGGCTGGACGTCAGGGGGTTCTACGGTCATAATAGTAGGGGATAACTTTTTCGATGGACTCCAAGTCGTATTCGGAACTATGTTAGTTTGGAGCGAGCTTATAACGTCACACGCGATTAGAGTGCAAACACCGCCGCGACACATACCAGGCGTGGTGGAAGTTACTCTTTCGTACAAAAGCAAGCAGTTCTGTAAGGGAGCACCTGGAAGATTCGTTTATGTTTCAGCTCTCAACGAGCCGACAATAGATTACGGCTTCCAGAGACTACAGAAACTTATACCGAGACATCCGGGCGATCCTGAAAAACTGCCCAAGGAAATAATACTGAAGCGAGCGGCAGATTTAGCGGAGGCTTTGTATTCTATGCCCCGTAACAACCAACTGGGGCTCGGGGCGCCGCGCTCGCCGCCCGCCAGTATGCCATTCAACTCCTACACGGGACAGCTGGCTGTCAGTGTACAGGACACTGCCACATCGCAGTGGACTGAAGAGGAGTACGCGCGCAGCGGCGGCTCGGTGTCGCCGCGCTACTGCTCGGCCGCGTCCACGCCGCACGCGCCCGCCTACGCGCCGCAGCACTACCCCGCGCCGCCCGCCGCGCTCTTCAACACGTCCTCGCTGTCTCTAGGACCGTACCATCCGGCGAACTTGAACGGACATATATCGTCTGAACACTATAACGTGTATAATACGAAAGAAAGCGACTATTACGCTGAAAGAAATGGCGAGTGTAAGAATGAATGTACCGTAAACACTCATACGAAATGCAGTGACGGACTTGGCAAAGGGAAGCCTCGAAGTGCGTTCGCAGTCGTCAGAAATAGTCCACCGCGTAATTTACAACAACAAAATTGGCAACACCTCGCCGTCCAGTGTTAG
- Protein Sequence
- MRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGIDAAPEPNCTFSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTATSQWTEEEYARSGGSVSPRYCSAASTPHAPAYAPQHYPAPPAALFNTSSLSLGPYHPANLNGHISSEHYNVYNTKESDYYAERNGECKNECTVNTHTKCSDGLGKGKPRSAFAVVRNSPPRNLQQQNWQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00984815;
- 90% Identity
- iTF_01078861;
- 80% Identity
- -