Npol013037.1
Basic Information
- Insect
- Nymphalis polychloros
- Gene Symbol
- kn
- Assembly
- GCA_905220585.1
- Location
- HG992253.1:9756836-9765339[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-123 4e-119 399.1 0.0 205 387 1 201 1 206 0.99 2 2 9.8e-11 1.3e-06 27.6 5.6 420 565 210 355 202 365 0.79
Sequence Information
- Coding Sequence
- ATGAGAAGGTTTCAAGTGGTGATATCAACGCAAGTCATGGTTGACGGTCCCCTGCTGGCGATATCGGACAACATGTTCGTTCACAACAACAGTAAACACGGGAGACGAGCAAAGCGACTCGATCCGTCTGAAGGTACTGACGCCGCGCCCGAGCCTAATTCGGGACTATACCCACCGTTGCCTGTAGCAACGCCATGCATCAAAGCAATATCTCCGAGCGAAGGCTGGACGTCAGGGGGTTCTACGGTCATAATAGTAGGGGATAACTTTTTCGATGGACTCCAAGTCGTATTCGGAACTATGTTAGTTTGGAGCGAGCTTATAACATCACACGCGATTAGAGTGCAGACACCGCCGCGTCACATACCAGGCGTGGTGGAAGTTACTCTTTCATACAAGAGCAAGCAGTTCTGTAAGGGAGCGCCTGGAAGATTCGTTTATGTTTCAGCTCTCAACGAGCCGACAATAGATTACGGCTTCCAGAGACTACAGAAACTTATACCGAGACATCCGGGCGATCCCGAAAAACTGCCCAAGGAAATAATACTGAAGCGAGCGGCAGATTTAGCGGAGGCTTTGTATTCTATGCCCCGTAACAACCAACTGGGGCTCGGGGCGCCGCGCTCGCCGCCCGCCAGTATGCCCTTCAACTCCTACACGGGGCAGCTGGCTGTCAGTGTACAGGACACTGCCGCATCGCAGTGGACTGAAGAGGAGTACGCGCGCAGCGGCGGCTCGGTGTCGCCGCGCTACTGCTCGGCCGCGTCCACGCCGCACGCGCCCGCCGCCTACGCGCCGCAGCACTACCCCGCGCCGCCCTCCGCGCTCTTCAACACCTCCTCGCTGTCTCTAGGACCGTACCATCCGGCGAACATGAACGGACATATATCGTCTGAACACTATAACGTGTATAATACGAAAGATAGCGACTATTACGCTGAAAGGAATGGCGAGTGTAAGAATGAATGTACCGTAAACACTCATACGAAATGCAGTGAACTTGGCAAAGGGAAGCCTCGCAGTGCGTTCGCAGTCGTCAGAAATAGTCCACCGCGTAATTTACAACATCAAAATTGGCAACATCTCGCCGTCCAGTGTTAG
- Protein Sequence
- MRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDAAPEPNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAPAAYAPQHYPAPPSALFNTSSLSLGPYHPANMNGHISSEHYNVYNTKDSDYYAERNGECKNECTVNTHTKCSELGKGKPRSAFAVVRNSPPRNLQHQNWQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00984815;
- 90% Identity
- iTF_01078861;
- 80% Identity
- -