Vtam008046.2
Basic Information
- Insect
- Vanessa tameamea
- Gene Symbol
- kn
- Assembly
- GCA_037043105.1
- Location
- CM073286.1:9142633-9150502[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.6e-120 4.7e-116 388.8 0.0 209 387 19 214 9 219 0.98 2 2 3.9e-09 1.9e-05 23.6 7.8 420 569 223 371 215 384 0.71
Sequence Information
- Coding Sequence
- ATGCGCACGTTTTTGTACGATATCGATGCAGGTCGAAGATTGGTGGGTTTTATTTTCGTGGTGATATCAACGCAAGTCATGGTGGACGGTCCACTGCTGGCGATATCGGATAACATGTTCGTCCACAACAACAGTAAACACGGGAGACGAGCGAAGCGACTCGATCCGTCTGAAGGTACTGACGCCGCGCCCGAGCCTAATTCGGGGCTATACCCACCGTTGCCTGTAGCAACGCCATGCATCAAAGCAATATCTCCGAGCGAAGGCTGGACGTCAGGGGGTTCTACGGTCATAATAGTAGGGGATAACTTTTTCGATGGTCTCCAAGTCGTGTTCGGAACTATGTTAGTTTGGAGCGAGCTTATAACGTCACACGCGATCAGAGTACAAACTCCACCACGACACATACCCGGCGTCGTGGAAGTTACTCTTTCGTACAAGAGCAAGCAGTTCTGTAAGGGAGCACCTGGAAGATTTGTTTATGTTTCTCTCAACGAGCCGACAATAGATTACGGATTCCAGAGACTACAGAAACTTATACCGAGACATCCGGGTGATCCTGAAAAACTGCCCAAGgaaataataCTGAAGCGAGCGGCAGATTTAGCGGAGGCTTTGTATTCTATGCCTCGTAACAACCAACTGGGCCTTGGGGCGCCGCGCTCGCCGCCCGCCAGTATGCCGTTCAACTCTTACACGGGGCAGCTGGCTGTCAGTGTACAGGACACTGCCGCATCGCAGTGGACTGAAGAGGAGTACGCGCGCAGCGGCGGCTCGGTGTCGCCGCGCTACTGCTCGGCCGCGTCCACGCCGCACGCCGCCTACGCGCCGCAGCACTACCCCGCGCCGCCCTCCTCGCTCTTCAACTCCTCCTCGCTGTCTCTAGGACCGTACCATCCGGCGAACATGAACGGACATATATCCTCCGAACACTATAGCACGTATAGCACGAAAGATAGCGAGTATTACGCTGAAAGAAATGGCCAGTGTAAGAATGAATGTCCTGTAAACACTCATACGAAATGCAGTGACGGGCTTGGCAAAGGGAAGGCTAGAAGTGCGTTCGCAGTCGTCAGAAATAGTCCACCGCGTAATTTACAACATCAAAATTGGCAACATCTCGCCGTCCAGTattacaGAGTAATTAGTGTTATCTTGTCAACAGGAATGAGCGGTCTGGTGTCGTCGCCGTTTAGCGTCAACCCGTTCTCGCTGCCCACGTGTAGCGCGCAACAATACGCACAGACCGCCCCGCTCGCTTCCAAGTAA
- Protein Sequence
- MRTFLYDIDAGRRLVGFIFVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDAAPEPNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAYAPQHYPAPPSSLFNSSSLSLGPYHPANMNGHISSEHYSTYSTKDSEYYAERNGQCKNECPVNTHTKCSDGLGKGKARSAFAVVRNSPPRNLQHQNWQHLAVQYYRVISVILSTGMSGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00984815;
- 90% Identity
- iTF_01078861;
- 80% Identity
- -