Ncom015150.1
Basic Information
- Insect
- Noctua comes
- Gene Symbol
- -
- Assembly
- GCA_963082995.1
- Location
- OY720283.1:10416915-10431506[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-12 9.1e-08 32.4 0.0 4 78 33 109 31 119 0.85
Sequence Information
- Coding Sequence
- ATGTTATTGTTTTCGAACACGTACGACAAGTGGGACCGGGACAGGGGCGGGGGGagcggcggcgggggcggcgggtcAGGCGCGTGGGCCGGCCGCGACCGCGAACGCGACCGCGAGCGCGAGCGacaggcgcgcgcgcaccaGATGTCGCAGGCGCACGCCGCCGAACCCGACGCATCGTCGCTCTTCCCGGCGCCGTTCAGGGTGTCAGGCAGGCAGGATCGCGTGAGTCAGCAGATCCAGACCAAGCTCGGCGACTACCATCTCGCGCAGTGGTTCATCGATGACCCCAGCAAATCCATCGGGATCTGCGCTGAACCACCAAGTCCTGCACCATGTAAGTCCTACCTACATTATCACATGGAACCGTAG
- Protein Sequence
- MLLFSNTYDKWDRDRGGGSGGGGGGSGAWAGRDRERDRERERQARAHQMSQAHAAEPDASSLFPAPFRVSGRQDRVSQQIQTKLGDYHLAQWFIDDPSKSIGICAEPPSPAPCKSYLHYHMEP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00685453;
- 90% Identity
- iTF_01246997; iTF_01085251; iTF_01030245; iTF_00124285; iTF_00831238; iTF_01230598; iTF_00771940; iTF_01533062; iTF_00951848; iTF_00851815; iTF_00274441; iTF_01527241; iTF_00449119; iTF_00446156; iTF_00445191; iTF_00785216; iTF_00928716; iTF_00685453; iTF_00907896; iTF_01062814; iTF_01063774; iTF_01064677;
- 80% Identity
- -