Basic Information

Insect: Nasonia vitripennis
Gene Symbol: Rreb1
Assembly: GCA_009193385.2
Location: NC:32733640-32747502[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0012 0.1 12.6 0.6 1 23 66 88 66 88 0.96

2 16 0.00021 0.018 15.0 0.1 1 23 104 126 104 126 0.97

3 16 5.1e-07 4.3e-05 23.2 1.2 1 23 132 155 132 155 0.98

4 16 2 1.7e+02 2.5 0.1 3 23 251 273 251 273 0.88

5 16 0.048 4 7.6 0.6 2 23 279 301 279 301 0.94

6 16 0.86 72 3.6 0.5 1 19 351 369 351 371 0.90

7 16 0.045 3.8 7.7 0.1 1 23 484 506 484 506 0.96

8 16 1.1e-05 0.0009 19.1 0.9 1 23 515 537 515 537 0.98

9 16 0.0008 0.067 13.2 2.8 1 23 543 566 543 566 0.97

10 16 0.00029 0.025 14.6 3.0 1 23 942 965 942 965 0.97

11 16 0.00042 0.035 14.1 0.1 3 23 1249 1269 1247 1269 0.97

12 16 0.87 73 3.6 6.7 1 23 1275 1298 1275 1298 0.96

13 16 0.011 0.9 9.6 2.2 1 23 1339 1363 1339 1363 0.95

14 16 2 1.7e+02 2.5 3.3 1 23 1506 1529 1506 1529 0.89

15 16 0.0072 0.6 10.2 0.4 2 23 1581 1602 1580 1602 0.94

16 16 2.1 1.7e+02 2.5 5.6 1 21 1608 1628 1608 1629 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0012	0.1	12.6	0.6	1	23	66	88	66	88	0.96
2	16	0.00021	0.018	15.0	0.1	1	23	104	126	104	126	0.97
3	16	5.1e-07	4.3e-05	23.2	1.2	1	23	132	155	132	155	0.98
4	16	2	1.7e+02	2.5	0.1	3	23	251	273	251	273	0.88
5	16	0.048	4	7.6	0.6	2	23	279	301	279	301	0.94
6	16	0.86	72	3.6	0.5	1	19	351	369	351	371	0.90
7	16	0.045	3.8	7.7	0.1	1	23	484	506	484	506	0.96
8	16	1.1e-05	0.0009	19.1	0.9	1	23	515	537	515	537	0.98
9	16	0.0008	0.067	13.2	2.8	1	23	543	566	543	566	0.97
10	16	0.00029	0.025	14.6	3.0	1	23	942	965	942	965	0.97
11	16	0.00042	0.035	14.1	0.1	3	23	1249	1269	1247	1269	0.97
12	16	0.87	73	3.6	6.7	1	23	1275	1298	1275	1298	0.96
13	16	0.011	0.9	9.6	2.2	1	23	1339	1363	1339	1363	0.95
14	16	2	1.7e+02	2.5	3.3	1	23	1506	1529	1506	1529	0.89
15	16	0.0072	0.6	10.2	0.4	2	23	1581	1602	1580	1602	0.94
16	16	2.1	1.7e+02	2.5	5.6	1	21	1608	1628	1608	1629	0.95

Sequence Information

Coding Sequence: ATGGATTTCTCCGTGAAAGTGACAGCCGAGACTGGACCTGATCATCACCGCGACGGCGATAGGCAAACGGATGTTGCATCATCGGCACTGTGCAACCTTTTCATTTCCAAGGTCGAgtcagagcagcagcagcagcagcagcagcagcagcagcagcagcaaagccCCACACAGCAGTCAGGAGCAGAAGGAAGCCACCCGTGTCCAGCCTGTCCGACGGTGCTGTCGAGTTCTCGGGAGCTGACGCACCACCTGCGCGGCCACAACTCGCCCCGAAGCACGACCGACTGCAGCGGCGAGGAGGTCGACTACGCCTGCGGCGTCTGCCACAAGGTCCTCAGCTCGGCCAGCTCCCTCGACCGACACGTACTCGTGCACTCCGGCGAGCGGCCCTTCAAGTGCAAGTACTGTGAAATGGCCTTCACGACCAACGGCAACATGAACAGGCACCTGAGGACGGCCCACAGGACGGCCTCGCCGTCCCACAGCTGCACCGACTCCGAGGCCAGCAGCGACTCCGAGCGACCGCTCAACAAGCGCAGACTCGTGCAGGACGAGTACAACAACAACGACGTCGCCAAGCGCAACTCGCCCGAGCTCCTCGTCTCCTCCCAGGCGAAGCGCCGCTGCCCGGACTACGCCGACGAGGCCGACAGCCAGCGCAGGCACAAGATCCTGCTGGGCAACGCCAGGAGCGAGATCCGCGGCGGCTACTCTGACTCTACCGCGCCGCCCGACGGGCTCCTCGGCTGCGCCGTCTGCGGCCTCCATGACTTCGCCGCGGCCGAACAGCTCGAGGCCCACATGGAGCGCCAGCACCCGGACGTGCCGGCCAGGTGCGAGAGCTGCAGCCTTGGCTTCAAGAACAATAGGGCGCTCATCCTCCACCGCTTCATGCTCCACTTGGGCGAGGGTGCCCGCAAGCGCCTGCGCAACTCCGTCGTCGGATTCAACGACCTCACATTCGTCGACTTCTCTTCCGATAAGTTCCCCACCATCGCCCGGGCCGTCTGCGAGCAGTCGCTGCACCGGCCAGCCACCGGCAAGGCCTACCAGTGCTCCAAGTGCCTGCGGGCCTTCCCCTGCCGCTCGGCCCTCGACGCCCACGAGACCGACTGCGGCAGGGCCGGCGAGCagcagccgctgctgcaggaCCAGTCGGGCCGCGACGACTTCTTCGCCGGGCTGGACCTGCAGAACAATGCCATCCCCGAGACCAAGGAACAGGGCAAGGACCTCGCCGACATCCAGAGCATCATCAACAACACCGCCGGACCGATCCTCCAGACCCTCAACCGCGACGACGCCTGCACGCCCGACAACTGCAAGATCAAGCTGAGCTTCGGCTCGTCCGGCTCCTCGGGCACGCCCTGCTCCGAGTCCTACCACGAGGAGGAGGCCCAGGACGCATTTGCCGCCGAATTTCGCAAGATGAAGATGAAGGGCGAGTTCCCGTGCCGGCTCTGCAGCGCCGTGTTCCCCAATCTGCGCGCCCTCAAGGGCCACAACCGCGCCCACATGGGCGTGGGACCGGGCATGCCCTATCCCTGCAACATGTGTCCCTACAGCAGTACCGATAAGCAGACCCTTACAAGGCACCTCAGGTCGCACAACGGCGACCGGCCCTACGAATGCTCGCTCTGCAACTACGCCTTCACCACCAAGGCCAACTGCGAGCGGCACGTGAGGAACCGGCACGGCAAGCTCTCACGCGAGGAGATCAAGAGCGTGCTCATCTACCACCCCAGCGAGGACTCCACCAACGACGGCAGCCTCGAGCGAGCCTCGCCCCGGGGACCCTCGCACGTGCGCGACGAGGTGCGCAAGACCCTGGTCTACCCCAGCGAGCGAGACGAGCTGCCGATCAGCCAGTATCCCCAGGCCGGCGAGCTGAGGATCAAGGACGAGGCCAAGCTCAGGCAGCCAGGACTGCCGGGACTCCACGCCATCGGCAGCCACGAGCTCTTCCCCAGGCCACCCCAGCAGCCCCTCGAGCTGACCTACCGCGGCGACGAGCGGCAGCTAGCCGAGAGCGAGGTCAAGGAGGAGGACCTCGACTCGAGGTCGTCGGACGGCAGCGTGTCTCTAGTCAGCGAAGCCAAAACGGACGCCGCACACCAAAGAATTCAGGCCAGTCCCATGGACCTGAAGAAGTCGAGCAACCCTGTCTCCCAGGCCGAAGATGCGCCGCTCGACCTCAGCATGGACGTGCTGGACCTCAGCCGCAAGGCCAAGGCtgccgcagccgccgccgcggctctCAAGGCCGAAGGAGCCAACGGCGAGAATTTGAAAACGCAGGAGGGCAAGGACCTCTACAACACGACCAATCAGCTACTGCTGACCCAAGCTCTGCTCAAGGCCGGACAGACCCAGCAGCCCTCCTCGCTCGAAGCATTCTACGCCAATGCTCAAATGCTCTACCGGAACTTTGGAACGTTCCCCGCGGCGGCCGCCGGTATCCTCCAGCCGTACCTCTTCAACCCGCACCTCTTCGGCCAGGACTACGCCATGAAGGACAGGATGCAGAAGGAGCTGATCCGCGGACTCCAGACCAGCGGGGGTAGCCTCGTGGAGCCCCAGGCTCCGAGCTACGGCGCCGCTGCCTTCCCCCAGCAGAGCGGCCGTCAGCCGGACCAGAACAACTCCGGCTACGCCAATCTCATGTCCTCCGCCAAGCTCATCAGCAAGAGCTTGACGCCGTCGTCCAGGGACAAGAACCTGGACGGCAACTCGCAGTCGTCCAACTCCGTGAAGATGGTGATCAAGAACGGCGTGCTCATGCCCAAGCAGAAGCAGCGACGCTACAGAACCGAGCGTCCCTTCACCTGCGAGCACTGCTCGGCCAGGTTCACCCTGCGTAGCAACATGGAGCGACACATTAAGCAGCAGCACCCTCAGCACTGGAGCCAGAGACCCAGGGGCGGACACTCGACCCGAGGCAGACCGCCGGCGAATCCGCCGACGCTTCTACAGAACCTCCAGGGCAGCTCGCACCATCACGCCCAGCAGCAGTCCCAGTCCTACAGTGGACTAATGCCGAAGCTCGGACAGCAAGTCCCTCCCGGTGACTACGGCAAGCACGCCATATCCGACCAGGTCAAGTACGCCATCTTGGCCTCGCAGCTGAAGGGCGGCAGCAAGCCCGAGGAGAACGACTCCGACGAGGAGCTCGTCATCGATGAAGAGAATGAGAAGGAGCACAGAGAACCCACCGAGAGGACGCTCAGTCTGCTCCGGGGCAAACTCGAGGCCAACATCGAGAGCAAGGGCAGCGAGGACGTGGACACGAAGGAGGTCAGGGTCAAGGAGAAGATCAAGCAGGAGATCGACAGCCACATCGAGCACAAGAACGACGAGCACGACGTGCTCAACACCAAAGAGCGGGACGACGAGTCCGATGAGGAGGAGGATGACGACGAGGTCACCTCAATCGTACCCGAGGCCATGGTCAAGACCGAGCTGCGCGATCTCAAGGAGGACCAGGAGGATCTGGCCAGCGTGTCCGAGATCCTGGACAACGCTTCCCAGCACTACCAGCACTTCCAGTCGCAGTACATGAGCGACGAGGAGGGCCTGGTTGCCTCGACGAGCGACTGCAACCAGTCGGGCAGCGACGAGAAGTCCGACTCGGTCAACTCGGCCAACTCCGGACACTCGTCCTgctcgaagaagaagaagaagaagatgaagaaaaagaagaagaagaagtccgCTTACTCGATGGCCCCCAACCGAGTGATCTGCCCGTACTGCGAGCGTCCTTTCCCCTGGACCTCCTCGCTGCGCCGTCACATTCTCACGCATACGGGCCAGAAGCCCTTCCAGTGCATGCACTGTTCCCTTCTCTTTACCACTAAGTCCAACTGCGATCGTCACCTGCTGCGCAAGCACAAGAACAAGATCGAGAAGCTGCGCAGAACCCGCAGCACCTCGTCGCCGGAGCTCCAGGAGCCACCGAgcatcaacaacaacagcagccaGTTCGCCATGAGGAACGTGCCCGAGCGGCCCTACAAGTGCAACCAGTGCCCCAGCTCGACCTTCTCAACCCTCGGCAATCTCAAGAAACACAAGTCCTCGAAGCACCAGTACCAGCAGCGCCATACAGGCCCGAAATCGCGTCCGGACTCGCCCTGCAGCGAACCCCAGCACAGTCCCCAGGACTGCAGTCCAGCTCAGAACGAGGCTCAAGTCCAGGACGAGTCCGTCCACCCGACCCAGCAGTGCAACGTCCAGGAGTGCGCCGAGCCTCAGGACTGCCataaacagcagcagcaaggtACCGACCAGAGCGGCTACGAGAGCCAGTCGTCCGGGGTCTCTGATAACATGGCCGAGAACCTGGCCGACCGCCTCGAGGGTATGAGCTCCACGCCGATCGCCGATCCAGCCAAGAACggcatcaacaacaacaacaacaacaacaacgcaTCCAGGAAGAACTCGCCTACTTCGTCGCCGGGACCCAACAACAGCGGCAACAGCAGCGCCAACAACTCCGAAGCTGCGCCTTTCAAGTGCCACCTCTGCGACAGCGGCTTCTCCGAGAGGAACGACTGCCTCGAGCACATCAAGGACAACCACGAGCGCTCCTACGAGATGCTCGTCGCCAAGGGTGCCCTGGAAATGGACTTTGACGGTGCCGACGAGCCCATGCCACCGCAGCCACCACCGCCACCCCAGAACCCTAGCGATGGCGAGGGCAGGCGGTTCCCCGACTACAGCAACAGAAAGGTCGTCTGCGCCTTCTGCATGCGTCGCTTCTGGTCGGCCGAGGACCTCCGTCGCCACATGCGCACCCACACGGGCGAACGCCCGTTCTCATGCGACATCTGCTGCCGGCGCTTCACCCTGAAGCACAGCATGCTTCGCCACCGCAAGAAATGCGAGTCGTGCGTCGACTCCAGCATGTACGTGGGCACGAGCGGCGACGAGGACACGGGCATGAGCCAACCGCCCACGATAACGCCTCGCTCTCAGCAACACTCGTCCCAGATggcgcagcaacagcagcgcacCTCACTACCCCAGGTCGCGAGCGTCGCCACTGCCGACGCTGCGCCCAGTGGACTCATGCGCTTCAATCCTTACGAGAAGCTGACCACCCTCACGGGTAAACTCACCGCCGGTGTTTCTCCAAGCGTCGACGCCGGCGACAACAGCGACAACAGCGATCTCATCTCCAACCTACTCGGCATCGGGGACAAGAACTTGATCGACCGGGTACTTCAATCCTCGGTGGACGACGCCGCCAAGCTTCTGGGTGTCAAGGCACACCACGAATGA
Protein Sequence: MDFSVKVTAETGPDHHRDGDRQTDVASSALCNLFISKVESEQQQQQQQQQQQQQSPTQQSGAEGSHPCPACPTVLSSSRELTHHLRGHNSPRSTTDCSGEEVDYACGVCHKVLSSASSLDRHVLVHSGERPFKCKYCEMAFTTNGNMNRHLRTAHRTASPSHSCTDSEASSDSERPLNKRRLVQDEYNNNDVAKRNSPELLVSSQAKRRCPDYADEADSQRRHKILLGNARSEIRGGYSDSTAPPDGLLGCAVCGLHDFAAAEQLEAHMERQHPDVPARCESCSLGFKNNRALILHRFMLHLGEGARKRLRNSVVGFNDLTFVDFSSDKFPTIARAVCEQSLHRPATGKAYQCSKCLRAFPCRSALDAHETDCGRAGEQQPLLQDQSGRDDFFAGLDLQNNAIPETKEQGKDLADIQSIINNTAGPILQTLNRDDACTPDNCKIKLSFGSSGSSGTPCSESYHEEEAQDAFAAEFRKMKMKGEFPCRLCSAVFPNLRALKGHNRAHMGVGPGMPYPCNMCPYSSTDKQTLTRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLSREEIKSVLIYHPSEDSTNDGSLERASPRGPSHVRDEVRKTLVYPSERDELPISQYPQAGELRIKDEAKLRQPGLPGLHAIGSHELFPRPPQQPLELTYRGDERQLAESEVKEEDLDSRSSDGSVSLVSEAKTDAAHQRIQASPMDLKKSSNPVSQAEDAPLDLSMDVLDLSRKAKAAAAAAAALKAEGANGENLKTQEGKDLYNTTNQLLLTQALLKAGQTQQPSSLEAFYANAQMLYRNFGTFPAAAAGILQPYLFNPHLFGQDYAMKDRMQKELIRGLQTSGGSLVEPQAPSYGAAAFPQQSGRQPDQNNSGYANLMSSAKLISKSLTPSSRDKNLDGNSQSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLQNLQGSSHHHAQQQSQSYSGLMPKLGQQVPPGDYGKHAISDQVKYAILASQLKGGSKPEENDSDEELVIDEENEKEHREPTERTLSLLRGKLEANIESKGSEDVDTKEVRVKEKIKQEIDSHIEHKNDEHDVLNTKERDDESDEEEDDDEVTSIVPEAMVKTELRDLKEDQEDLASVSEILDNASQHYQHFQSQYMSDEEGLVASTSDCNQSGSDEKSDSVNSANSGHSSCSKKKKKKMKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPFQCMHCSLLFTTKSNCDRHLLRKHKNKIEKLRRTRSTSSPELQEPPSINNNSSQFAMRNVPERPYKCNQCPSSTFSTLGNLKKHKSSKHQYQQRHTGPKSRPDSPCSEPQHSPQDCSPAQNEAQVQDESVHPTQQCNVQECAEPQDCHKQQQQGTDQSGYESQSSGVSDNMAENLADRLEGMSSTPIADPAKNGINNNNNNNNASRKNSPTSSPGPNNSGNSSANNSEAAPFKCHLCDSGFSERNDCLEHIKDNHERSYEMLVAKGALEMDFDGADEPMPPQPPPPPQNPSDGEGRRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKCESCVDSSMYVGTSGDEDTGMSQPPTITPRSQQHSSQMAQQQQRTSLPQVASVATADAAPSGLMRFNPYEKLTTLTGKLTAGVSPSVDAGDNSDNSDLISNLLGIGDKNLIDRVLQSSVDDAAKLLGVKAHHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01036516; iTF_00144074; iTF_01190702; iTF_01274766; iTF_00286683;
90% Identity: iTF_01036516;
80% Identity: -