Basic Information

Insect: Nasonia longicornis
Gene Symbol: Rreb1
Assembly: GCA_000004795.1
Location: GL277950.1:1217836-1223531[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0034 0.22 11.9 0.4 1 23 43 65 43 65 0.96

2 14 0.00033 0.022 15.1 0.1 1 23 81 103 81 103 0.97

3 14 8.2e-07 5.3e-05 23.3 1.2 1 23 109 132 109 132 0.98

4 14 2.8 1.8e+02 2.7 0.1 3 23 228 250 228 250 0.91

5 14 0.077 5 7.6 0.6 2 23 256 278 256 278 0.94

6 14 1.4 88 3.7 0.6 1 19 328 346 328 349 0.90

7 14 0.072 4.7 7.7 0.1 1 23 481 503 481 503 0.96

8 14 1.7e-05 0.0011 19.1 0.9 1 23 512 534 512 534 0.98

9 14 0.0013 0.082 13.2 2.8 1 23 540 563 540 563 0.97

10 14 0.00047 0.03 14.6 3.0 1 23 939 962 939 962 0.97

11 14 0.00067 0.044 14.1 0.1 3 23 1246 1266 1244 1266 0.97

12 14 0.017 1.1 9.7 2.2 1 23 1336 1360 1336 1360 0.95

13 14 3.2 2.1e+02 2.5 3.3 1 23 1469 1492 1469 1492 0.89

14 14 0.011 0.74 10.2 0.4 2 23 1544 1565 1543 1565 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0034	0.22	11.9	0.4	1	23	43	65	43	65	0.96
2	14	0.00033	0.022	15.1	0.1	1	23	81	103	81	103	0.97
3	14	8.2e-07	5.3e-05	23.3	1.2	1	23	109	132	109	132	0.98
4	14	2.8	1.8e+02	2.7	0.1	3	23	228	250	228	250	0.91
5	14	0.077	5	7.6	0.6	2	23	256	278	256	278	0.94
6	14	1.4	88	3.7	0.6	1	19	328	346	328	349	0.90
7	14	0.072	4.7	7.7	0.1	1	23	481	503	481	503	0.96
8	14	1.7e-05	0.0011	19.1	0.9	1	23	512	534	512	534	0.98
9	14	0.0013	0.082	13.2	2.8	1	23	540	563	540	563	0.97
10	14	0.00047	0.03	14.6	3.0	1	23	939	962	939	962	0.97
11	14	0.00067	0.044	14.1	0.1	3	23	1246	1266	1244	1266	0.97
12	14	0.017	1.1	9.7	2.2	1	23	1336	1360	1336	1360	0.95
13	14	3.2	2.1e+02	2.5	3.3	1	23	1469	1492	1469	1492	0.89
14	14	0.011	0.74	10.2	0.4	2	23	1544	1565	1543	1565	0.94

Sequence Information

Coding Sequence: atgtttaaccGATCGCCTTTTCTTCTGCTTGCAGTGACCGCCGAGACTGGACCTGATCATCACCGCGACGGCGATAGGCAAACGGATGTTGCATCATCGGCACTGCAGTCAGGAGCAGAAGGAAGCCACCCGTGTCCAGCCTGTCCGCTGGTGCTGTCGAGTTCTCGGGAGCTGACGCACCACCTGCGCGGCCACAACTCGCCCCGAAGCACGACCGACTGCAGCGGCGAGGAGGTCGACTACGCCTGCGGCGTCTGCCACAAGGTCCTCAGCTCGGCCAGCTCCCTCGACCGACACGTACTCGTGCACTCCGGCGAGCGGCCCTTCAAGTGCAAGTACTGTGAAATGGCCTTCACGACCAACGGCAACATGAACAGGCACCTGAGGACGGCCCACAGGACGGCCTCGCCGTCCCACAGCTGCACCGACTCCGAGGCCAGCAGCGACTCCGAGCGACCGCTCAACAAGCGCAGACTCGTGCAGGACGAgtacaacaacaacgacgtcGCCAAGCGCAACTCGCCCGAGCTCCTCGTCTCCTCCCAGGCGAAGCGCCGCTGCCCGGACTACGCCGACGAGGCCGACAGCCAGCGCAGGCACAAGATCCTGCTGGGCAACGCCAGGAGCGAGATCCGCGGAGGCTACTCTGACTCTACCGCGTCGCCCGACGGGCTCCTCGGCTGCGCCGTCTGCGGCCTCCGTGACTTCGCCGCGGCCGAACAGCTTGAGGCCCACATGGAGCACCAGCACCCGGACGTGCCGGCCAGgtgcgagagctgcagccTTGGCTTCAAGAACAATAGGGCGCTCATCCTCCACCGCTTCATGCTCCACTTGGGCGAGGGTGCCCGCAAGCGCCTGCGCAACTCCGTCGTCGGATTCAACGACCTCACATTCGTCGACTTCTCTTCCGACAAGTTCCCCACAATCGCCCGGGCCGTCTGCGAGCAGTCGCTGCACCGGCCCGCCACCGGCAAGGCCTACCAGTGCTCCAAGTGCCTGCGGGCCTTCCCCTGCCGCTCGGCCCTCGACGCCCACGAGACCGACTGCGGCAAGGCcggcgagcagcagccgctgctgcaggacCAGTCGGGCCGCGACGACTTCTTCGCCGGGCTGGACCTGCAGAACAATGCCATCCCCGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAACCCCACCCGCGACGACGCCTGCACGCCCGACAACTGCAAGATCAAGCTGAGCTTCGGCTCGTCTGGCTCCTCGGGCACGCCCTGCTCCGAGTCCTACCACGAGGAGGAGGCCCAGGACGCATTCGCAGCTGAATTTCGTAAGATGAAGATGAAGGGCGAATTCCCGTGCCGGCTCTGCAGCGCCGTGTTCCCCAATCTGCGCGCCCTCAAGGGCCACAACCGCGCCCACATGGGCGTGGGACCGGGCATGCCCTATCCCTGCAACATGTGTCCCTACAGCAGTACCGATAAGCAGACCCTTACAAGGCACCTCAGGTCGCACAACGGCGACCGGCCCTACGAGTGCTCGCTCTGCAATTACGCCTTCACCACCAAGGCCAACTGCGAGCGGCACGTGAGGAACCGGCACGGCAAGCTCTCACGCGAGGAGATCAAGAGCGTGCTCATCTACCACCCCAGCGAGGACTCCACCAACGACGGCAGCCTCGAGCGAGCCTCGCCCCGGGGACcctcgcacgtgcgcgacgaGGTGCGCAAGACCCTGGTCTACCCCAGCGAGCGAGACGAGCTGCCGGTCAGCCAGTATCCCCAGGCCGGCGAGCTGAGGATCAAGGACGAGGCCAAGCTCAGGCAGCCGGGACTGCCGGGACTCCACGCCATCGGCAACCACGAGCTTTTCCCCAGGCCACCCCAGCAGCCCCTCGAGCTGACCTACCGCGGCGACGAGCAGCAGCTAGCCGAGAGCGAGGTCAAGGAGGAGGACCTCGACTCGAGGTCGTCGGACGGCAGCGTGTCTCTAGTCAGCGAAGCCAAAACGGACGCCGCACACCAAAGAATTCAGGCCAGTCCCATGGACCTGAAGAAGTCGAGCAACCCTGTCTCCCAGGCCGAAGATGCGCCGCTCGACCTCAGCATGGACGTGCTGGACCTCAGCCGCAAGGCCAAGgctgccgcagccgccgccgcggctctcAAGGCCGAAGGAGCCAACGGCGAGAATTTGAAAACGCAGGAGGGCAAGGACCTCTACAACACGACCAATCAGCTACTGCTGACCCAAGCTCTGCTCAAGGCCGGCCAGACTCAGNNNCCCTCCTCGCTAGAAGCCTTCTACGCTAATGCTCAAATGCTCTACCGGAACTTTGGAACGTTCCCCGCGGCGGCCGCCGGTATCCTCCAGCCGTACCTCTTCAACCCGCACCTCTTCGGCCAGGACTACGCCATGAAGGACAGGATGCAGAAGGAGCTGATCCGCGGACTCCAGACCAGCGGGGGTAGCCTCGTGGAGCCCCAGGCTCCGAGCTACGGCGCCGCTGCCTTCCCCCAGCAGAGCGGCCGTCAGCCGGACCAGAACAACTCCGGCTACGCCAATCTCATGTCCTCCGCCAAGCTCATGAGCAAGAGCTTGACGCCGTCGTCCAGGGACAAGAACCTGGACGGCAACTCGCAGTCGTCCAACTCCGTGAAGATGGTGATCAAGAACGGCGTGCTCATGCCCAAGCAGAAGCAGCGACGCTACAGAACCGAGCGTCCCTTCACCTGCGAGCACTGCTCGGCCAGATTCACCCTGCGTAGCAACATGGAGCGACACATTAAGCAGCAGCACCCTCAGCACTGGAGCCAGAGACCCAGGGGCGGACACTCGACCCGAGGCAGACCGCCGGCGAATCCGCCGACGCTTCTACAGAACCTCCAGGGCAGCTCGCACCATCACGCCCAGCAGCAGTCCCAGTCCTACAGTGGACTGATGCCGAAGCTCGGACAGCAAGTCCCTCCCGGTGACTACGGCAAGCACGCCATATCCGACCAGGTCAAGTACGCCATCTTGGCCTCGCAGCTGAAGGGCGGCAACAAGCCCGAGGAGAACGACTCCGACGAGGAGCTCGTCATCGATGAAGAGAATGAGAAGGAGCACAGAGAACCCACCGAGAGGACGCTCAGTCTGCTCCGGGGCAAACTCGAGGCCAACATCGAGAGCAAGGGCAGCGAGGACGTGGACATGAAGGAGGTCAGGGTCAAGGAGAAGATCAAGCAGGAGATCGACAGCCACATCGAGCACAAGAACGACGAGCACGACGTGCTCAACACCAAAGAGCGGGACGACGAGTCcgatgaggaggaggatgacGACGAGGTCACCTCAATCGTACCCGAGGCCATGGTCAAGACCGAGCTGCGCGATCTCAAGGAGGACCAGGAGGATCTGGCCAGCGTGTCCGAGATCCTGGACAACGCTTCCCAGCACTACCAGCACTTCCAGTCGCAGTACATGAGCGACGAGGAGGGCCTGGTTGCCTCGACGAGCGACTGCAACCAGTCGGGCAGCGACGAGAAGTCCGACTCGGTCAACTCGGCCAACTCCGGACACTCGTCcagctcgaagaagaagaagaagaagatgaagaaaaagaagaagaagaagtccgCTTACTCGATGGCCCCCAACCGAGTTATCTGCCCGTACTGCGAGCGTCCCTTCCCCTGGACCTCCTCGTTGCGCCGTCACATACTGACGCATACGGGCCAGAAGCCCTTCCAGTGCATGCactgctctcttctctttaCAACCANNNNNAACTGCGACCGCCACCTGCTGCGCAAGCACAAGAACAAGATCGAGAAGCTGCGCAGAACCCGTAGCACCTCGTCGCCGGAGCTCCAGGAGCCACCGagcatcaacaacaacagcagccaGTTCGCTATGAGGAACGTGCCCGAGCGGCCCTACAAGTGCAACCAGTGCCCCAGCTCGACCTTTTCAACCCTCGGCAATCTCAAGAAACACAAGTCCTCGAAGCACCAGTACCAGCAGCGCCATCCAGGCCCGAAATCCCGTCCGGACTCGCCCTGCAGCGAACCCCAGCACAGTCCCCAGGACTGCAGTCCAGCTCAGAACGAGGCTCAAAGCGGCTACGAGAGCCAGTCGTCCGGGGTCTCTGATAACATGGCCGAGAACCTGGCCGACCGCCTCGAGGGTATGAGCTCTACGCCGCTCGCCGATCCAGCCAAGAACGGCatcatcaacaacaacaacaacaacaacgccTCCAGGAAGAACTCGCCTACTTCGTCGCCGGGACCCAACAACAGCNGCAACAGCGCCAACAACTCCGAAGCTGCGCCTTTCAAGTGCCACCTCTGCGACAGCGGCTTCTCCGAGAGGAACGACTGCCTCGAGCACATCAAGGACAACCACGAGCGCTCCTACGAGATGCTCGTCGCCAAGGGTGCCCTGGAGATGGACTTTGACGGTGCCGACGAGCCCATGCCACCGCTGCCACCACCGCCACCCCAGAACCCTAGCGATGGCGAGGGCAGGCGGTTCCCCGACTACAGCAACAGAAAGGTCGTCTGCGCCTTCTGCATGCGTCGCTTCTGGTCGGCCGAGGACCTCCGTCGCCACATGCGCACCCACACGGGCGAACGCCCGTTCTCCTGCGACNTCTGCTGCCGGCGCTTCACCCTGAAGCACAGCATGCTTCGCCACCGCAAGAAGTGCGAGTCGTGCGTCGACTCCAGCATGTACGTGGGCACGAGCGGCGACGAGGACACGGGCATGAGCCAACCGCCCACGATAACGCCTCGCTCTCAGCAACACTCGTCCCAGatggcgcagcagcagcagcgcgcctCACTACCCCAGGTCGCGAGCGTCGCCACTGCCGACGCTGCGCCCAGTGGACTCATGCGCTTCAATCCCTACGAGAAGCTGACCACCCTCACGGGTAAACTCACCGCCGGTATTTCTCCAAGCGTCGACGCCGGCGACAACAGCGACAACAGCGATCTCATCTCCAACCTACTCGGCATCGGGGACAAGAACTTGATCGACCGGGTACTTCAATCCTCGGTGGACGACGCCGCCAAGCTTCTGGGTGTCAAGGCACACCATGAATGA
Protein Sequence: MFNRSPFLLLAVTAETGPDHHRDGDRQTDVASSALQSGAEGSHPCPACPLVLSSSRELTHHLRGHNSPRSTTDCSGEEVDYACGVCHKVLSSASSLDRHVLVHSGERPFKCKYCEMAFTTNGNMNRHLRTAHRTASPSHSCTDSEASSDSERPLNKRRLVQDEYNNNDVAKRNSPELLVSSQAKRRCPDYADEADSQRRHKILLGNARSEIRGGYSDSTASPDGLLGCAVCGLRDFAAAEQLEAHMEHQHPDVPARCESCSLGFKNNRALILHRFMLHLGEGARKRLRNSVVGFNDLTFVDFSSDKFPTIARAVCEQSLHRPATGKAYQCSKCLRAFPCRSALDAHETDCGKAGEQQPLLQDQSGRDDFFAGLDLQNNAIPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNPTRDDACTPDNCKIKLSFGSSGSSGTPCSESYHEEEAQDAFAAEFRKMKMKGEFPCRLCSAVFPNLRALKGHNRAHMGVGPGMPYPCNMCPYSSTDKQTLTRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLSREEIKSVLIYHPSEDSTNDGSLERASPRGPSHVRDEVRKTLVYPSERDELPVSQYPQAGELRIKDEAKLRQPGLPGLHAIGNHELFPRPPQQPLELTYRGDEQQLAESEVKEEDLDSRSSDGSVSLVSEAKTDAAHQRIQASPMDLKKSSNPVSQAEDAPLDLSMDVLDLSRKAKAAAAAAAALKAEGANGENLKTQEGKDLYNTTNQLLLTQALLKAGQTQXPSSLEAFYANAQMLYRNFGTFPAAAAGILQPYLFNPHLFGQDYAMKDRMQKELIRGLQTSGGSLVEPQAPSYGAAAFPQQSGRQPDQNNSGYANLMSSAKLMSKSLTPSSRDKNLDGNSQSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLQNLQGSSHHHAQQQSQSYSGLMPKLGQQVPPGDYGKHAISDQVKYAILASQLKGGNKPEENDSDEELVIDEENEKEHREPTERTLSLLRGKLEANIESKGSEDVDMKEVRVKEKIKQEIDSHIEHKNDEHDVLNTKERDDESDEEEDDDEVTSIVPEAMVKTELRDLKEDQEDLASVSEILDNASQHYQHFQSQYMSDEEGLVASTSDCNQSGSDEKSDSVNSANSGHSSSSKKKKKKMKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPFQCMHCSLLFTTXXNCDRHLLRKHKNKIEKLRRTRSTSSPELQEPPSINNNSSQFAMRNVPERPYKCNQCPSSTFSTLGNLKKHKSSKHQYQQRHPGPKSRPDSPCSEPQHSPQDCSPAQNEAQSGYESQSSGVSDNMAENLADRLEGMSSTPLADPAKNGIINNNNNNNASRKNSPTSSPGPNNSXNSANNSEAAPFKCHLCDSGFSERNDCLEHIKDNHERSYEMLVAKGALEMDFDGADEPMPPLPPPPPQNPSDGEGRRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDXCCRRFTLKHSMLRHRKKCESCVDSSMYVGTSGDEDTGMSQPPTITPRSQQHSSQMAQQQQRASLPQVASVATADAAPSGLMRFNPYEKLTTLTGKLTAGISPSVDAGDNSDNSDLISNLLGIGDKNLIDRVLQSSVDDAAKLLGVKAHHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01037292;
90% Identity: iTF_01037292;
80% Identity: -