Basic Information

Insect: Pteromalus puparum
Gene Symbol: RREB1
Assembly: GCA_012977825.2
Location: Scaffold:953660-959349[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0027 0.25 11.9 0.4 1 23 55 77 55 77 0.96

2 16 0.00026 0.025 15.0 0.1 1 23 93 115 93 115 0.97

3 16 3e-06 0.00028 21.1 1.3 1 23 121 144 121 144 0.98

4 16 0.065 6.1 7.5 0.5 2 23 238 260 237 261 0.92

5 16 0.035 3.3 8.3 2.4 2 23 267 289 267 289 0.95

6 16 1.1 1e+02 3.7 0.5 1 19 338 356 338 358 0.90

7 16 0.057 5.3 7.7 0.1 1 23 477 499 477 499 0.96

8 16 0.00048 0.045 14.2 0.7 1 23 508 530 508 530 0.98

9 16 0.0042 0.4 11.2 2.2 1 23 536 559 536 559 0.96

10 16 0.00047 0.044 14.2 3.2 1 23 936 959 936 959 0.97

11 16 0.0004 0.037 14.5 0.1 3 23 1246 1266 1244 1266 0.97

12 16 0.34 32 5.2 4.9 1 23 1272 1295 1272 1295 0.96

13 16 0.013 1.3 9.6 2.2 1 23 1336 1360 1336 1360 0.95

14 16 1.9 1.8e+02 2.9 3.2 1 23 1507 1530 1507 1530 0.91

15 16 0.009 0.85 10.2 0.4 2 23 1579 1600 1578 1600 0.94

16 16 0.0085 0.8 10.3 4.6 1 21 1606 1626 1606 1627 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0027	0.25	11.9	0.4	1	23	55	77	55	77	0.96
2	16	0.00026	0.025	15.0	0.1	1	23	93	115	93	115	0.97
3	16	3e-06	0.00028	21.1	1.3	1	23	121	144	121	144	0.98
4	16	0.065	6.1	7.5	0.5	2	23	238	260	237	261	0.92
5	16	0.035	3.3	8.3	2.4	2	23	267	289	267	289	0.95
6	16	1.1	1e+02	3.7	0.5	1	19	338	356	338	358	0.90
7	16	0.057	5.3	7.7	0.1	1	23	477	499	477	499	0.96
8	16	0.00048	0.045	14.2	0.7	1	23	508	530	508	530	0.98
9	16	0.0042	0.4	11.2	2.2	1	23	536	559	536	559	0.96
10	16	0.00047	0.044	14.2	3.2	1	23	936	959	936	959	0.97
11	16	0.0004	0.037	14.5	0.1	3	23	1246	1266	1244	1266	0.97
12	16	0.34	32	5.2	4.9	1	23	1272	1295	1272	1295	0.96
13	16	0.013	1.3	9.6	2.2	1	23	1336	1360	1336	1360	0.95
14	16	1.9	1.8e+02	2.9	3.2	1	23	1507	1530	1507	1530	0.91
15	16	0.009	0.85	10.2	0.4	2	23	1579	1600	1578	1600	0.94
16	16	0.0085	0.8	10.3	4.6	1	21	1606	1626	1606	1627	0.95

Sequence Information

Coding Sequence: ACCGCCGAGACTGGACCTGATCACCGCGACAGCGAGAGGCAAACGGATGTTGCATCATCAGCATTGTGCAACCTTTTCAATTTCAAGGTCGAGCCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAAGCCCTACACAACAGTCAGGAGCAGAAGGAAGCCACCCGTGTCCGGCCTGTCCACTGGTGTTGTCAAGTTCGCGCGAGCTGACCCACCACCTGCGCGGCCATAACTCACCCCGAAGTACAACTGACTGCAGTGGCGAGGAGGTCGACTACGCTTGCGGTGTCTGTCATAAAGTTCTAAGCTCGGCCAGTTCCCTTGACCGACACGTCCTCGTACACTCCGGAGAAAGACCCTTTAAGTGTAAGTCTTGTAACATGGCCTTCACTACCAACGGCAATATGAACCGGCATCTCAGGACGGCCCACCGAACTGCCTCCTCGCCATCACACAGTTATACCGACTCCGAAGCTAGCAGTGACTCCGAGCGGCCGCTTAATAAACGCAGACTCGTCCAGGACGAGTACAACAACAACGACGTCGCCAAGCGCAACTCACCCGAGCTCATCATCCCCCAGGCTAAGCGCCGCTGTCCGGACTACGCCGACGAAGCCGATAGTCAGCGCAGGCATAAAATTTTACTCGGAAATGCCAGGAGCGAGATCCGCGGTGGCTACTCCGATTCTCCACCAGCTAGGCTCATCCTCAGCTGTGCCGTCTGCGGCCACCAGGACTTCCCTACGGCTGGACAGCTGGAGAGCCACATGGAGAACCACCACCCGGACGTACCGGCAAAGTGCGAGAGCTGCAGCATCAGCTTCAAAAACCACCGAGCGCTGAACCTCCACCGCTTCATGATCCACTTGAAGGAAGGTGCCAAGCACCTACGCAAATCCGTCGTCGGATTCAATGACCTCACTTTCGTCGACTTCTCCTCCGACAAGTTCCCCACCATCGCCCGGGCCGTCTGCGAACAGTCGCTGCATAGACCCGCCACCGGCGATGCTTACCAGTGCTCCAAGTGTCTGCGAGCCTTCCCCTGCCGCTCAGCTCTCGACGCCCACGAGACCGACTGCGGTAGCCGACTCGGCCAGAGCGGCGAACATCAGCATCGACTTCACCCGGACGACCAGTCGGGCCGCGACGACTTCTTCGCCGGACTCGACCTTCAGAACAAAGCCGCTCTGACCGAGGCCAAGGAGGGCAAGGATCTCGCCGATATACAGAGCATCATCAGCGTTACCTCTGGACCAATCCTCCAGAACCTCAACCGAGCCGACGCTTGCACGCCCGACAACTACAAGATCAAGCGAAAATTCGGCTCGTCCAGCTCCTCGGACACACCCTACCCCGAGGCCTACCGCGTAGAGGAAGAGACTCAGAATTTCGCCGCCGAGTTCCGCCAGATGAAGCTGAAGGGCGAGTTTCCCTGTCGACTCTGCAGCGCCGTGTTCCCAAACCTACGTGCTCTCAAGGGTCACAACCGCGCCCACATGGGCGTCGGTCCAGGCATGCCCTATCCCTGCAACATGTGCACCTTCAATAGTACAGACAAGGCCACTCTCGTCAGACACCTTCGCTCTCACAACGGCGACCGACCCTACGCGTGCTCGATCTGCAGCTTCGCATTCACCACCAAGGCCAACTGTGAGAGGCATGTACGCAACCGACACAAAATATCTCGAGAAGAGATCAAGAGCATCCTCATCTATCATCCCAGCGAGGACTCTGCCAACGACGGCAGCCTCGAACAAGTCTCCCCCGGAGGACCCTCGCACGTGCGCGGCGAGGTCCGCAAGACCCTCGTCTACCCCAGCGAGCGAGACGAGCTGCCGGTCAACCAGTACCCCCAGGCAGGCGAGCTCAGGATCAAAGACGAGGCCAAGCTTAGGCAGCCAGGACTGCCTGGACTCCAGGCCATCGCCACCCGCGAACTCTTCCCTGGGCCTCCCAGGCCACCTCAGCAGCCTCTCGAGCTGACCTATCGTGGCGACGAGCAGCAGGCCGGCAGCGAGGTCAAAGAGGAAGACCTCGACTCGAGGTCGTCGGACGGCTGCGTGTCTCTAGTCAGCGAAGCCAAAGCGGACGCCGCACACCAAAGAATCCAGGCCAGCCCGATGGACCTGAAGAAGTCCAACAGCTCGGCCGCCCAGTCCGAAGACGCGCCCCTCGACCTCAGCATGGACGTCCTCGATCTGAGTCGCAAGGCCAAGGCTGCTGCAGCCGCCGCTGCGGCTCTCAAGGCCGACGGAGCCAATGGCGAGGATATGAGGACGCAAGAGGGCAGCCACGGCCAAGACCTCTACAACACGACGAACCAGCTGCTGCTGACCCAGGCTCTGCTCAAAGCTGGCCAGACTCAGCAGCCTTCCTCCCTCGAGGCCTTCTACGCCAACGCTCAGATGCTCTACAGGAACTTTGGCTCGTTCCCCGCAGCAGCCGGTATCCTCCAGCCGTACCTCTTCAACACTCACCTCTTCGGCCAGGACTACGCCATGAAGGACAGGATGCAGAAAGAACTGATCCGCGGACTCCAGACCAGTGGCGGTAGCCTCGTTGAGCCACAGGCTCCGAGCTACGGCGCAGCTGCCTTCCCACAGCAGAGCAACCGTCAGCCGGATCAGAACAATTCTGGCTACACTAAGCTCATGAGCAAAAGCTTGACACACACCACCTTGCCGTCGTCCCGGGACAAGAGCCTAGACGGCAACTCGCCGTCGTCCAACTCCGTGAAGATGGTCATCAAGAACGGCGTGCTCATGCCCAAGCAGAAGCAGCGACGCTACAGGACCGAGCGACCCTTCACCTGTGAACACTGCACCGCCAAATTTACCTTACGCAGCAACATGGAGCGACATATCAAACAACAGCATCCCCAGCACTGGAGCCAGAGACCCAGAGGCGGACACTCCACCCGAGGCAGACCACCGGCGAATCCGCCGACACTTCTGCAAAATCTCTCACAACCTCACCATCACTCCCAGCAGCAGATGGTCCAGTCCTACGGTTCACTGCTACCGAAGCTCGGACAACAGGTCGCTCCCGACGACTACGGCAAGCACGCCATATCCCACCAGGTCAAGTACGCCATCTTGGCCCAGCAGCTGAAGGGCGGTAGCAAACCCGAAGAGAACGACTCCGACGAGGAACTCGTCATCGACGAGGAGATGGAGAAGGAGCACAGGGAACCCACCGAGAGAACGCTCAGTCTGCTCAGGGGAAAACTTGAGGCCAACATCGAAAGCAAGATCGGTAGCGAAGCCGTGGACATGAAGGAGGTCAGGGTTAAGGATGAGTTCAAGGAGAAAAAGGAGAAAATCAAGCAGGAGATCGACAGCCACATCGAGCACAAGAACGACGAGCACGACGTGCTCAACACCAAAGAGCACGACGAGGAGTTCGACGAGGAGGAGGAGGAGGACGATGACGAGATCTCCTCCATCATACCCGAGGCCATGGTCAAGACCGAGCTGCGCGATCTCAAGGAGGACCAGGAGGATCTGGCCAGCGTATCCGAGATCCTGGACAACGCTTCCCAGCACTACCAGCACTTCCAGTCGCAGTACATGAGCGACGAGGAGGGCCTGGTCGCCTCGACGAGCGACTGCAACCATTCGGGCAGCGACGAGAAGTCCGACTCCGAACACTCGTCTAGCTCGAATAAGAAGAAGAAGATGAAGAAAAAGAAGAAGAAAAAGTCCGCCTACTCGATGGCTCCCAACAGAGTCATATGCCCGTACTGCCAGCGACCCTTCCCCTGGACCTCTTCGCTACGTCGACACATCCTCACGCACACGGGCCAGAAGCCCTTCCAGTGCATGTACTGCTCACTTCTCTTTACCACGAAGTCCAACTGCGACCGCCACTTGCTGCGCAAGCACAAGAACAAGATCGAGAAGCTGCGAAGGGCTCGCAGCACCTCGTCACCGGAGCTCCAAGAGCCACCGAGCATTAACAACAACAGCAGCGGCTTCGCCATGAGGAACGTGCCTGAGCGACCCTACAAGTGCAACCAGTGTCCCAGCTCGACATTCTCCACCCTTGGCAATCTCAAGAAACATAAGTCCTCGAAGCACCAGTACCAGCAGCGTCATCTAGCCCCGAAATCCCGTCCGGACTCGTCCTGCAGCGAACCCCAGCACAGTCCCCAGGACTGCAGTACAGCTCAGAACGAGGCCCAAGTCCAGGAGGAGTCCATCACTCCGGCACAACAGTGCAACGTCCAGGAGTGCGCGGAGCCTCAGGACTGCCAGAAACAGCAAGGCACCGACCAGAGCGGCTACGAGAGCCAGTCATCCGGAGTCTCGGATAACATGGCCGAGAACCTGGCCGACCGCCTCGAAGGCATGAGCTCGACGCCAATCGCCGATCCAGCCAAGAACGGCCACAATAATAACAACAACAACAACAACAACAACAACAACAACAACGCCTCTAGGAAGAACTCGCCTACCTCGTCACCAGGACCCAACAACAGCGGTAGCAGCAGCGCCAACAACTCTGAAGCTGCGCCTTTCAAGTGCCACCTCTGCGACAGCGGCTTCTCCGAAAGGAACGACTGCCTCGAGCACATCAAGGAGAACCACGAGCACTCCTACGAGATACTCGTCGCAAAGGGTGCCCTGGAAATGGACTTCGAAGGTGCTGAAGAGCCCATGCCACCTCAGCCACCCCAGAATCCCAGCGACGGCGAGGGCAGGCGGTTCCCCGACTACAGCAACAGAAAGGTCGTCTGCGCCTTCTGTATGCGTCGCTTCTGGTCAGCAGAAGATCTCCGTCGCCACATGCGCACACACACAGGCGAGCGCCCGTTTTCCTGTGACATCTGCCACCGGCGCTTCACCCTTAAACATAGTATGCTGCGCCATCGCAAAAAGTGCGAGTCCTCTGCCGACTCCAATATGAACGTCGGCACCAGCGGCGACGAGGACACGGGCATGAGTCAACCACCCACGATAACCCCTCGTTCTCAACAACACTCGTCCCAGATGGCTCAACAGCAGCAACGTGCCTCTTTACCCCAGGTTGCGAGTGTCGCTACTGCTGACGCTGCACCCAGTGGACTCATGCTCTTTAATCCGTACGAGAAATTGACGACTCTCACGGGTAAACTCACCGCTGGTGTGTCTCCGAGCGTCGACGTCGGTGACAATAACGATAACAATGACCTTATCTCCAACCTGCTGGGCATCGGGGACAAGAACTTCATCGACAAGGTACTCACGTCCTCGGTGGACGATGCAGCTAAGCTTCTAGGTGTTAAAGGACATCACGAATGA
Protein Sequence: TAETGPDHRDSERQTDVASSALCNLFNFKVEPQQQQQQQQQQQSPTQQSGAEGSHPCPACPLVLSSSRELTHHLRGHNSPRSTTDCSGEEVDYACGVCHKVLSSASSLDRHVLVHSGERPFKCKSCNMAFTTNGNMNRHLRTAHRTASSPSHSYTDSEASSDSERPLNKRRLVQDEYNNNDVAKRNSPELIIPQAKRRCPDYADEADSQRRHKILLGNARSEIRGGYSDSPPARLILSCAVCGHQDFPTAGQLESHMENHHPDVPAKCESCSISFKNHRALNLHRFMIHLKEGAKHLRKSVVGFNDLTFVDFSSDKFPTIARAVCEQSLHRPATGDAYQCSKCLRAFPCRSALDAHETDCGSRLGQSGEHQHRLHPDDQSGRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQNLNRADACTPDNYKIKRKFGSSSSSDTPYPEAYRVEEETQNFAAEFRQMKLKGEFPCRLCSAVFPNLRALKGHNRAHMGVGPGMPYPCNMCTFNSTDKATLVRHLRSHNGDRPYACSICSFAFTTKANCERHVRNRHKISREEIKSILIYHPSEDSANDGSLEQVSPGGPSHVRGEVRKTLVYPSERDELPVNQYPQAGELRIKDEAKLRQPGLPGLQAIATRELFPGPPRPPQQPLELTYRGDEQQAGSEVKEEDLDSRSSDGCVSLVSEAKADAAHQRIQASPMDLKKSNSSAAQSEDAPLDLSMDVLDLSRKAKAAAAAAAALKADGANGEDMRTQEGSHGQDLYNTTNQLLLTQALLKAGQTQQPSSLEAFYANAQMLYRNFGSFPAAAGILQPYLFNTHLFGQDYAMKDRMQKELIRGLQTSGGSLVEPQAPSYGAAAFPQQSNRQPDQNNSGYTKLMSKSLTHTTLPSSRDKSLDGNSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCTAKFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLQNLSQPHHHSQQQMVQSYGSLLPKLGQQVAPDDYGKHAISHQVKYAILAQQLKGGSKPEENDSDEELVIDEEMEKEHREPTERTLSLLRGKLEANIESKIGSEAVDMKEVRVKDEFKEKKEKIKQEIDSHIEHKNDEHDVLNTKEHDEEFDEEEEEDDDEISSIIPEAMVKTELRDLKEDQEDLASVSEILDNASQHYQHFQSQYMSDEEGLVASTSDCNHSGSDEKSDSEHSSSSNKKKKMKKKKKKKSAYSMAPNRVICPYCQRPFPWTSSLRRHILTHTGQKPFQCMYCSLLFTTKSNCDRHLLRKHKNKIEKLRRARSTSSPELQEPPSINNNSSGFAMRNVPERPYKCNQCPSSTFSTLGNLKKHKSSKHQYQQRHLAPKSRPDSSCSEPQHSPQDCSTAQNEAQVQEESITPAQQCNVQECAEPQDCQKQQGTDQSGYESQSSGVSDNMAENLADRLEGMSSTPIADPAKNGHNNNNNNNNNNNNNNASRKNSPTSSPGPNNSGSSSANNSEAAPFKCHLCDSGFSERNDCLEHIKENHEHSYEILVAKGALEMDFEGAEEPMPPQPPQNPSDGEGRRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICHRRFTLKHSMLRHRKKCESSADSNMNVGTSGDEDTGMSQPPTITPRSQQHSSQMAQQQQRASLPQVASVATADAAPSGLMLFNPYEKLTTLTGKLTAGVSPSVDVGDNNDNNDLISNLLGIGDKNFIDKVLTSSVDDAAKLLGVKGHHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01037292;
90% Identity: -
80% Identity: -