Mper009631.1
Basic Information
- Insect
- Myzus persicae
- Gene Symbol
- bab1
- Assembly
- GCA_001856785.1
- Location
- NW:445143-487010[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-15 1.8e-12 46.5 0.0 1 41 386 427 386 431 0.93 2 2 2.2 1.2e+03 -1.0 0.3 6 15 516 525 512 541 0.84
Sequence Information
- Coding Sequence
- ATGCAACCAAGTAACGGCTCCAAAGACTTGTCGTCGGCGGCAGCCGAGAAGACTTGCGGCGCGACCGGCAGTTCCGGCAACCAGCAGTTCTGCTTGCGGTGGAACAACTACCAGAGTAATCTGACCAACGTGTTCGACCAACTGCTGCAGAACGGCACGTTCGTGGATGTGACGATCGCCTGCGACGGTCACACGCTCAAAGCGCACAAGATCGTGCTGTCCGCGTGTAGCCCGTATTTCCAGAGCATGCTGGCCGAGAACAAGTGTAAGCACCCAATCGTCATACTGAAAGACGTCCAGTGGCCTGAGTTAAGGGCCGTCGTCGATTTTATGTACAAGGGTGAAATAAACGTTTACCAGGAACAGATTGGCCCTCTGTTACGCGTGGCCGAGACTCTGAAAGTCCGCGGTCTGGCCGACGTCAGCAACGAACAACTCACCGGCGGCGGTGGATGTGAACCACAGGCCGCGGCCACCGTGGTGACGCCCACGACTGTAGCTCCCGAATCTCCCAAACAGCCAGCCCGCAAGCGCCACAGACTGTCTCCACCGGCGGCCAGCCCAGAGTCGGTCATGTCCGACATGGGATCGTCGGCCACGGACACGCCGCTCAATCTGCACCACATGCCGCCTCCCCCGGCCCCCCATCATCAGCAGCAGGTGCAGTCGCACGTGCACCAGCACCAccaccagcagcagcagcagcagcagcaacaacagcagcagcagcaacaacaacaacaacaacaacaacagcaacaacaacaacaacaacatcagcagcagcaacagcagcagcaacaacatcaacaacaacagcaacagcagtcGTCACAACAGCCACCGGCACCGCAAGCCATGCCGCCGTCCGCCTCGTCcgcttcgtcgtcgtcgtcatcatcgtcatcgATACCACCGCCGAGCAGCGTGGCTGACGATATGGAGATAAAGCCGGGCATCGCCGAGATGATACGCGAGGAAGAAAGAGCCAAAATGTTTGAAAGTTCTCAGGCCTGGCTCGCATCCACGTCCTCGCCAATGACatCTGACAGTTACCAGTACCAGCTGCAGTCCATGTGGCAAAAGTGCTGGAACACCAACCAGAGCCTCGTGCACAACCTGCGGTTCAGAGAGCGCGGTCCGCTCAAGTCGTGGAGACCAGAAACGATGGCTGAGGCCATACTGTCCGTGCTCAAGGAGGGTCTGTCGTTATCACAGGCTGCCCGCAAGTACGACATACCGTATCCGACGTTCGTGCTGTACGCTAACCGGGTGCACAACTTGCTCGGTCCCTCCGCAGACGGTGGCGCAGacTTAAGGCCTAAAGGCAGAGGACGTCCTCAAAGGATATTGTTAGGATTTTGGCCAGAAGATCACATTCAAAATGTAATCAGGACTGTTGTGTTCAGAGACGCACAAAACATCAAAGAAGAAGCATTACACCTTTACCCAAGAATACcgtgTTTATCCGACCCAATGTCTGGTGGTCACTATGGTAACAACGCGGTTCAGTCGGTTGATGGTCCCGTGTCGCCAAACTCTGCCGCGGCCGCCGTGGCCGCCGTTGCGCAGGGTATACGGCAGCAAATGATGGCCGCCGCCGGACATAACATCTCTCCTTCGTCGGGTGTCGACGCGTTCGCCCTACTCGCCTCTTCGCACCTACCCAGTCCGGCTGACATGTCACCCAATTCGTCTCCACCCGATTCACCGTTAGTTTCCAACAACAACGTCGAGGTGAGCCTAAGCGGTTACAAGCGATCCATCGACCACTCCAATCAAGACAACGTGTTCGTCGAAGACATTGATGAGCTCGTGAAGAACAGCCATTGTACCGGAGGTTCGTCAATGGGCAACACCATCGATCAGCAGCCGTTGCCGTTAGTCATCGAGCAACGGACCGAATAA
- Protein Sequence
- MQPSNGSKDLSSAAAEKTCGATGSSGNQQFCLRWNNYQSNLTNVFDQLLQNGTFVDVTIACDGHTLKAHKIVLSACSPYFQSMLAENKCKHPIVILKDVQWPELRAVVDFMYKGEINVYQEQIGPLLRVAETLKVRGLADVSNEQLTGGGGCEPQAAATVVTPTTVAPESPKQPARKRHRLSPPAASPESVMSDMGSSATDTPLNLHHMPPPPAPHHQQQVQSHVHQHHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQHQQQQQQQSSQQPPAPQAMPPSASSASSSSSSSSSIPPPSSVADDMEIKPGIAEMIREEERAKMFESSQAWLASTSSPMTSDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAILSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNLLGPSADGGADLRPKGRGRPQRILLGFWPEDHIQNVIRTVVFRDAQNIKEEALHLYPRIPCLSDPMSGGHYGNNAVQSVDGPVSPNSAAAAVAAVAQGIRQQMMAAAGHNISPSSGVDAFALLASSHLPSPADMSPNSSPPDSPLVSNNNVEVSLSGYKRSIDHSNQDNVFVEDIDELVKNSHCTGGSSMGNTIDQQPLPLVIEQRTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01033101; iTF_00973155; iTF_00972962; iTF_00134150; iTF_00134597; iTF_01304304; iTF_01304100; iTF_00018929; iTF_00019300; iTF_00136052; iTF_00136242; iTF_01346551; iTF_01346377; iTF_01329081; iTF_01328523; iTF_00135229; iTF_00135498; iTF_00418206; iTF_00418393; iTF_01167776; iTF_01167518;
- 90% Identity
- iTF_01346551;
- 80% Identity
- iTF_01033101;