Basic Information

Insect: Aphis glycines
Gene Symbol: bab1
Assembly: GCA_009928515.1
Location: scaffold:443296-486152[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 2.4e-15 2.3e-12 46.5 0.0 1 41 385 426 385 430 0.93

2 2 1.7 1.6e+03 -1.0 0.3 6 15 515 524 511 540 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	2.4e-15	2.3e-12	46.5	0.0	1	41	385	426	385	430	0.93
2	2	1.7	1.6e+03	-1.0	0.3	6	15	515	524	511	540	0.84

Sequence Information

Coding Sequence: ATGCAACCGAGCAACGGCTCCAAAGACGTGCCGTCGTCGGCGACGACCGAGAAGACTTGCGGCGCGACAGGCGGTTCCGGCAACCAGCAGTTCTGCTTGCGCTGGAACAACTACCAGAGCAACCTGACCAACGTGTTCGACCAACTGCTGCAGAACGGCACGTTCGTGGACGTGACGATCGCCTGTGACGGTCACACGCTCAAAGCGCACAAGATCGTGTTGTCCGCGTGCAGCCCGTACTTCCAGAGCATGCTTGCCGAGAACAAGTGTAAGCACCCGATCGTCATACTCAAAGACGTCCAGTGGCCCGAGCTCAGGGCGGTCGTCGACTTTATGTACAAGGGCGAGATAAACGTCTATCAGGAACAGATCGGTCCGCTGCTACGCGTCGCCGAGACGCTGAAAGTCCGAGGTCTGGCCGACGTCAGCAACGAACAACTCACGGGCGGCGGTGGATGTGAACCACAAGCCGCGGCCACCGTGGTGACGCCCACGGCTTTAGCGCCCGAATCTCCCAAACAGCCGGCCCGCAAGCGGCACAGGCTGTCTCCGCCGGCGGCCAGCCCGGAGTCTGTCATGTCCGACATGGGATCGTCGGCAACGGACACGCCGCTCAACTTGCACCACATGCCGCCTCCTCCTGCCCCCCATCATCAACAGCAGTCGCAGTCTCAACTGTCGCACGTGCACCAGCACCACCAGCAGCAGCAGCAGCAACAGCAACAACAACAACAACAACAACAGCAGCAACAACAACAACATCAGCAACAGCAGCAACATCAGCAGCAACACCACCAACAACAACAACAGCAGCAGCAGCAGCAGTCGTCACAACAGACACCGGCGTCGCAGACCATGCCGCCGTCCGCCTCGTCCGCTTCGTCGTCGTCGTCGTCATCGTCATCGATACCGCCGCCGAGCAGCGTGGCCGACGATATGGAAATAAAGCCGGGCATCGCCGAAATGATACGCGAGGAAGAAAGAGCCAAAATGTTTGAAAGTTCTCAAGCCTGGCTCGCATCCACGTCCTCGCCAATGACTTCCGACAGTTACCAGTACCAGCTGCAGTCCATGTGGCAAAAGTGCTGGAACACCAACCAGAGCCTGGTGCACAACCTGCGGTTCAGAGAGCGCGGTCCGCTCAAGTCGTGGAGACCAGAAACGATGGCCGAGGCCATTCTGTCCGTGCTCAAGGAGGGCCTTTCGCTGTCGCAGGCCGCCCGCAAGTACGACATACCGTATCCGACGTTCGTGCTGTACGCCAATAGGGTGCACAACTTGCTCGGTCCATCCGCAGACGGCGGCGCAGACTTAAGGCCTAAAGGCAGAGGACGTCCTCAAAGGATATTGTTAGGATTTTGGCCAGAAGATCACATTCAAAATGTAATCAGGACTGTTGTATTTAGAGACGCACAAAACATCAAAGAAGAAGCATTACACCTTTACCCAAGAATACCGTGTTTATCCGACCCAATGTCTGGTGGTCACTATGGTAACAACGCGGTTCAGTCGGTTGAAGGTCCCGTGTCGCCAAACTCTGCCGCGGCCGCTGTGGCTGCCGTCGCGCAGGGTATACGGCAACAAATGATGGCCGCCGCCGGACATAACATCTCTCCTTCATCGGGTGTTGACGCATTCGCCCTACTCGCTTCTTCGCACCTACCCAGTCCGGCTGACATGTCACCCAATTCGTCTCCACCCGATTCACCTTTAGTTTCCAATAACAACGTCGAGGTGAGCCTAAGCGGTTACAAGCGATCCATTGACCACTCCAACCAAGACAACGTGTTCGTCGAAGACATTGATGAGCTCGTGAAGAACAGCCATTGTACTGGAGGCTCGTCAATGGGCAACAACATCGATCAGCAGCCGTTGCCATTAGTCATCGAGCAACGGACAGAATAA
Protein Sequence: MQPSNGSKDVPSSATTEKTCGATGGSGNQQFCLRWNNYQSNLTNVFDQLLQNGTFVDVTIACDGHTLKAHKIVLSACSPYFQSMLAENKCKHPIVILKDVQWPELRAVVDFMYKGEINVYQEQIGPLLRVAETLKVRGLADVSNEQLTGGGGCEPQAAATVVTPTALAPESPKQPARKRHRLSPPAASPESVMSDMGSSATDTPLNLHHMPPPPAPHHQQQSQSQLSHVHQHHQQQQQQQQQQQQQQQQQQQQHQQQQQHQQQHHQQQQQQQQQQSSQQTPASQTMPPSASSASSSSSSSSSIPPPSSVADDMEIKPGIAEMIREEERAKMFESSQAWLASTSSPMTSDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAILSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNLLGPSADGGADLRPKGRGRPQRILLGFWPEDHIQNVIRTVVFRDAQNIKEEALHLYPRIPCLSDPMSGGHYGNNAVQSVEGPVSPNSAAAAVAAVAQGIRQQMMAAAGHNISPSSGVDAFALLASSHLPSPADMSPNSSPPDSPLVSNNNVEVSLSGYKRSIDHSNQDNVFVEDIDELVKNSHCTGGSSMGNNIDQQPLPLVIEQRTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01032794;
90% Identity: iTF_01346551;
80% Identity: iTF_00135498;