Dvit019307.1
Basic Information
- Insect
- Daktulosphaira vitifoliae
- Gene Symbol
- bab1
- Assembly
- None
- Location
- scaffold120:379408-413606[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-16 2.8e-12 46.6 0.0 1 41 339 380 339 384 0.93 2 2 7 2.5e+04 -4.5 0.5 6 15 469 478 469 481 0.85
Sequence Information
- Coding Sequence
- ATGCAACCAAGCAACGGCTCCAAAGACTCGGGGCCGGCCACCGAGAAAACTGCTGGCGGCGGCGGCGGTGGCGGTAACCAACAGTTCTGCCTCAGATGGAATAACTACCAGAGCAACTTAACCAACGTTTTCGACCAGCTCTTGCAGAATGGTACTTTTGTAGATGTCACCATAGCGTGCGATGGCCACACTCTCAAGGCACATAAAATCGTCTTGTCTGCCTGTAGCCCTTACTTCCAAAGCATGCTCGCCGAAAACAAATGTAAGCATCCGATCGTCATACTGAAAGACGTCCAATGGCCCGAGCTGCGTGCTGTCGTTGACTTTATGTACAAAGGCGAGATTAACGTGTATCAGGAACAGATCGGACCGTTGTTGCGGGTAGCCGAGACGTTAAAAGTCCGCGGACTCGCCGACGTGAGTAATGAACAGCTTACCGGTGGAGGCAACGGCAATGAACCGCAAACCGCCACCGTGGTCACGCCGGCCGCTACGATTACCGAGCCGGGATCGCCGAAACAGCCAGCCCGCAAGCGGTACAGGATGTCTTGCAGTCCGGAAACTGTCATATCCGAACCCGGACAGGCAGATACACCGCTAAACTTACACCACATGCCAGCGTCGACTCATCATCCTAATCAAACGTCTTCGACTCCTCAATCTCAACATCAACAACAACCCCAACAACAGCAGCAGCAGCAGCAACAACAACAACAGTCTTCGCAACACGTGCATCAACAGCAACAAACGCCCTCTTCGATCCCACCTCCTCCTACTTCTAGCAGCGTGGTCGACGATTTGGAGATTAAGCCTGGCATCGCAGAAATGATCCGAGAAGAAGAAAGGGCAAAAATGTTTGAAAGTTCTCAAGCCTGGTTAGCTTCTACATCCTCACCCATGACCTCTGATAGTTACCAGTATCAACTACAATCTATGTGGCAAAAATGCTGGAACACCAATCAAAGTTTAGTACATAATTTGCGGTTCAGGGAACGTGGTCCTCTCAAGTCTTGGAGACCTGAGACCATGGCCGAAGCGATACTGTCAGTGCTCAAAGAAGGTCTATCTCTGTCGCAGGCTGCTCGCAAGTACGACATACCGTATCCTACATTTGTGTTATACGCTAACCGCGTGCACAATTTACTTGGACCCTCTGCTGATGGAGGCGCAGACTTGAGGCCTAAAGGTCGTGGACGTCCCCAGCGAATACTTTTAGGATTTTGGCCTGAAGATCACATTCAAAATGTTATTAGGACTGTTGTATTTAGAGATGCTCAAAACATCAAAGAAGAAGCGTTACACATGTACCCAAGAATACCGTGCTTGCCTGACCCTATGTCCGGTGGCCATTACGGTAACAACTCATTACCGTCAGGAGAAGGACCTGTGTCACCCAACTCGGCAGCCGCCGCTGTTGTAGCCGTGGCTCAGGGACTTCGTCAACAAATGATGGCTGCGGCCGGACACAACATCTCACCTTCATCCGGTGTAGACGCCTTTGCCTTACTAGCATCGTCTCACCTGCCTAGTCCTGCCGACATGTCGCCTAACTCAACGCCACCCGATTCTCCACTAGTGTCTAACAACAACGTAGAGGTTAGTCTGAGCGGTTACAAAAGATCTATTGACGGTCACCATCATAATCACCATCATTCGAATCAGGATAACGTTTTTGTAGAGGATATCGATGAACTGGTCAAGAACAGCCATTGCACCGGAGCATCGTCCATAAACAACACGATCGACCAACAGCCTTTGCCGTTGGTCATCGAACAACGGACTGATTAA
- Protein Sequence
- MQPSNGSKDSGPATEKTAGGGGGGGNQQFCLRWNNYQSNLTNVFDQLLQNGTFVDVTIACDGHTLKAHKIVLSACSPYFQSMLAENKCKHPIVILKDVQWPELRAVVDFMYKGEINVYQEQIGPLLRVAETLKVRGLADVSNEQLTGGGNGNEPQTATVVTPAATITEPGSPKQPARKRYRMSCSPETVISEPGQADTPLNLHHMPASTHHPNQTSSTPQSQHQQQPQQQQQQQQQQQQSSQHVHQQQQTPSSIPPPPTSSSVVDDLEIKPGIAEMIREEERAKMFESSQAWLASTSSPMTSDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAILSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNLLGPSADGGADLRPKGRGRPQRILLGFWPEDHIQNVIRTVVFRDAQNIKEEALHMYPRIPCLPDPMSGGHYGNNSLPSGEGPVSPNSAAAAVVAVAQGLRQQMMAAAGHNISPSSGVDAFALLASSHLPSPADMSPNSTPPDSPLVSNNNVEVSLSGYKRSIDGHHHNHHHSNQDNVFVEDIDELVKNSHCTGASSINNTIDQQPLPLVIEQRTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01032794;
- 90% Identity
- iTF_00418393;
- 80% Identity
- iTF_00418393;