Mmed020510.2
Basic Information
- Insect
- Microplitis mediator
- Gene Symbol
- -
- Assembly
- GCA_029852145.1
- Location
- CM056852.1:422378-431082[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 7.1e-06 0.001 20.3 1.0 1 23 222 244 222 244 0.98 2 31 0.0055 0.79 11.2 1.7 1 23 267 290 267 290 0.94 3 31 0.0056 0.8 11.2 0.6 2 23 297 319 296 319 0.96 4 31 0.00034 0.048 15.1 0.6 1 21 338 358 338 359 0.95 5 31 0.014 2 10.0 0.1 3 23 451 471 449 471 0.93 6 31 0.001 0.14 13.6 1.9 1 23 477 500 477 500 0.93 7 31 0.00014 0.019 16.3 0.1 1 23 581 604 581 604 0.96 8 31 0.0055 0.79 11.2 0.5 1 23 610 633 610 633 0.96 9 31 0.17 24 6.6 1.9 1 23 646 668 646 668 0.97 10 31 4.7e-05 0.0067 17.8 1.1 3 23 721 742 720 742 0.96 11 31 1.1 1.6e+02 4.0 1.2 2 23 808 831 807 831 0.91 12 31 3.6 5.1e+02 2.4 0.0 2 23 840 862 840 862 0.84 13 31 0.026 3.8 9.1 0.0 2 23 869 891 868 891 0.95 14 31 1.5e-05 0.0021 19.3 1.2 1 23 899 921 899 921 0.98 15 31 0.67 96 4.7 1.5 2 23 974 997 973 997 0.88 16 31 0.00024 0.034 15.5 3.3 1 23 1000 1023 1000 1023 0.97 17 31 0.00053 0.076 14.4 0.8 2 23 1030 1052 1029 1052 0.95 18 31 0.0018 0.26 12.8 5.2 1 21 1078 1098 1078 1099 0.95 19 31 0.0031 0.44 12.0 1.8 2 23 1113 1134 1112 1135 0.93 20 31 0.41 59 5.4 1.1 1 23 1138 1161 1138 1161 0.94 21 31 0.0086 1.2 10.6 1.8 2 23 1168 1191 1167 1191 0.94 22 31 1.1 1.6e+02 4.0 0.2 2 23 1198 1220 1198 1220 0.95 23 31 5.9 8.5e+02 1.7 0.0 2 23 1227 1249 1226 1249 0.91 24 31 0.26 37 6.0 2.7 2 23 1258 1280 1258 1280 0.96 25 31 4.3 6.1e+02 2.1 0.6 2 23 1286 1308 1286 1308 0.90 26 31 0.14 20 6.8 0.0 1 23 1366 1389 1366 1389 0.94 27 31 0.0037 0.53 11.8 2.8 1 20 1416 1435 1416 1437 0.95 28 31 0.57 81 4.9 1.3 2 23 1539 1561 1538 1561 0.94 29 31 0.98 1.4e+02 4.2 0.8 2 23 1568 1590 1567 1590 0.95 30 31 0.79 1.1e+02 4.5 2.5 1 23 1601 1623 1601 1623 0.97 31 31 0.025 3.6 9.2 0.1 3 20 1632 1649 1632 1651 0.97
Sequence Information
- Coding Sequence
- ATGGAGTCGAGAGAACGTTACGACGAGTTGTGTCGCCTGTGTGCATCTTACGATGCGGTTAAAATGGATATATTCGGACAAGAAGGAAAAAATCGTCAGCTAGTTGATAAAATACAGACTTGTCTACCATTCAagatTGCTGAGGATGATAGATTACCAAAATGTTTATGTTACCGTTGTATGTAtaatcttgaaaatttttatgattttcgAACGGCTTGTGTTAATGCCGTTGCGTTGCTTGAAAGAAAATTACCGCTAAAAGAATCttcaAACGATGGATTGCATAATGATATGGAAAAACATTCGGAATTACGTTCAGAATTACTTAAGGAGAAGGAAAAAATGCCAATTCTTATACCTGAAGCTCCGATAGTTAATCCAAATGCTGCGCTGGGCACTCCGCCGAGATTAAATTCAGACGGGGAAGCTGATCAGGAGATTGAAGAAATTCTTGAACACAGTGGTACTGAAGAGGGGTTAGAGGATGGCGAGGACAGAAAATACGATGACGAGTACGAGATGGACATGGAGACAAATCCTAGTGATTTTTTGGAAATGCCGCCGATGGTAACAGAGGACACGGAAGAAAACGACGGCAGCCAATTAAATTCAGTCCGTTCTCCAACTCTATTTCAACACAAATCTGAGCACCATGAAGTTTATGTCTGCTCGTTGTGTAACAAAGCATTCAGCTCTAAAGGACACCTGTCATTGCACGCGCGAATTCACGCAGGTGCTGGCGATGTCGTGGGTGAAAAAGTTATTACCGACGATCACACATCCTTCAAACGTTTGTACCAATGTGACCTCTGCAACAAATCTTACTCGACAGCTAAACACCGTTGGGGTCACGTGTCGTCGAATCATCGCGGACATCCAGCAGTTACGTGTCGATACTGCGCACGTTTATACTCGACACGTGGTAATCTCATGGATCATATTAAATCACGGCATACTGGACAGCCTCCACCTCCAAAACTCGGTATCTATGTGCCAACGGACAACCGCTTTCAATGTAATACCTGTCCTAAGATGTACACCAACATCACAGACTTGAATAAGCATAAAAAAGTTTGTACGGGTATTAGGGAATCATTAAATCAGCAGCTAAAGAAGAGAGGAAAGAGTTTGATGGACACATCAGAAGCATCGAGCTTTGAATCAGACGAAGACAGCAAAGATTATCGTACAGCAGAAGCTAAACTGTCAAAAAATCCTCAGCTTACTATTTTAAAACAAGCACTGACCCGCGGTGTCGAAGTATTGAAACGCGATGACCGGGATCCCTACAAATCATTGCGTGTACCTCAGATTGATCATACTGACGCCGAAGGCAAAAGATGGTTTTGTGAAACCTGCCCACAGTCATTCACTTCCATCGAAGCTCTGAAAGATCACGAGGTAGTGCATGAATCTGATAAACCATTCATTTGTCTTctatgtaaaaaacatttcACTTTAAAATCATCACTGAGTCGGCATATCATTGCGACACATGGTGTCGATCCAGGTCCAATGATCGACGACGAAAAGTGTCACAAAAGAAAATCATTATCATCGTCAACGGTATTGTCAATTATAAATGACAAGCAGCATCATCACTCAACACgtgatgatttaaaaataaaacgtgaACCCTCTGAATTATCATTTTCACCAGAACCACGAACCAACGCCGACGACGAAGAGGATCCTGACAATAATCAGCAGCACGATATGATTGAAATAGAAACTGTATTTGTATGTGAAATATGTACTCGTGATTTTAATGATCGCGCATCACTGTGGCTCCATATACGAGCAACGCACAAAGAGTACGCGGCATTTGCGTGCGGtgtatgtttaaaaatatgtacagaCAATGATCAATTGTTGAATCACGTAAACATGTATCATGGGGCTTCGAAATTACAGATATCTGAACAACGACGGTACAGTTGTACAATTTGCGGCAGACAGCATGACtcacgtaaaaaattaatgacacaTGTGTCAATACACAACATTGATCCTTCATACGATCCAGCAAATTTTGTCCAACTAAACAGCGGCTATTACAGCaacgaaaatataaatataaacaacgATGGTCATAATAATCAAGATCTTTCGACATCGGCAATTGACTTTGATCACGAGGACGGTGAAAAAGTTGACTGTTTTATTTGCTACAAATCATTTCCCAATGAAGATCACTTGATACGTCATCAACGTAACGCTCACAAGTCCGATCATGTGACGACACACGCGGCAGATCATCATCTTGTTGCTGCAAACACAAATGGACCAGCAAATCCGAATGGCAATAAAGCGcagtatcatttattttttgtctgtGAAATTTGTGGGAGCTCACATCCAAGCAAATGGGAACGTTGGTTACATGTAAGCAGCGTTCACAGCACAGAGACGCAGATACGATGCGAGCGTGAGGATTGTGCTAAAATATTTGCAACAAAGTCATTGAAAAATGAACACAATCAGCATCATGTGCTGCAAGGCGCGTCACCCAACACCTGTGAAATTTGTGGTAAATTGTGGGGTAGCCGTGTTGATTATTGGAAACACGTCATGGGCGTTCATTCAGACACAGTACCGTTGATTTGTGGTGTCTGTTTGAAAGTATTTCCCGATGTTGTTCAACTTAGCGCTCACGTTAAAAGTAAACACTGGCCATTGACCAACGGTGACTTTAGTTGTGATATTTGTGGACGTccttattcaaataaatcaaaaatgtCACGACATAGAAAAATACATGGGCTAGAATTAGAAAGCTACAGCAATGGTATCAACGATACAATTAATGATCCCGCTGGTACTGCTCCTGGTCCTAATCCTGGTGCTGGTGCTGGTGCTGTATCTACTGCTGCTGTTAATAATTACGAAACAAACGCTGCCACTGAAGTGGATTTGACTTGTGAAATGTGTACAGATTTGTTGTTCCCAAGCTGGGAAGATTTGTGTCATCATAGACGAATGATACACGGTCTATTTCCATGTGATTTATGTAACAAATGTTATGGACGCACATCTCACTTGTGGAAACACGTTAATCGGGTTCACAAAGGCCACAAAGACGTTACCTGCAAGTACTGCTTGAAGACTAGCGCTTCCAAGGATCATTTGACTGCTCACATTGCTAAAATTCACCGGTACGAGCCTGAAACAAAGCAGATACTTAAAGACGCAAATTATAAAACCCAGTCGGTGGAAGAGGACACGATTCATCACTGCGAGAAATGTAATAAAGCATTCCACAAACGTTATTTGTTGAAGAGACACATGAAAGGCTGCCAGAATTATCGTAAAGATCCGGGAGCTCTGCTGACGCGATGCCGTGCCTgcgaaagaatttttaaagacCGCGCTAGTTTGCAGAAACACATTGAAAATCATCACAGCAGCTACACGTGCCATTTGTGCAATGAAACAATAACTTCGAAACTCGGTATCATGACCCACAATCGTGTCAATCATATGAATCATCCAGATCTCACTTGTGATCACgcaaactgtaaaaaattattccggACTAAAGAAGATCTTGAAGTGCATCGTAAAGATCACAAGTATCATTCACCAAATGTATGTGATTTTTGTGGTGATACTgtggaaaataaattgaaattaaaaatgcatATTTTGTCACTGCATCGAAATGAAATTGGTGTGTCCTGCGGTGTCTGTTTGATACCCATGAAAGATCCTCAGGAGCTAAAAAATCATGTTGAAAGTGTTCATCCAGGTGTATTATTGAAACCAAACACTTGTCAGGTTTGTGGTAAGCAGTACGCATCCAAGTGGAAGGCTTTTGATCACACGAAAAAATGTCACGGTAAAGTTTTCCGTACATGCAAACAGTGTCTTGCTGTTTTTACAACAGACGCTGACATCAGATACCACTACGAGCATATTCATAATGTACCGAAAGATCAGTTGGCGGgctttgaaaataattcagaCCCCGGAGGTAAAGGTGCCGGTAATGACGACGGGATTAAAGAAGAGCCAGATGATTTGGAGTATGACGATGGCGTTTATGATGATATACCACGGGTTAAATCGTCAAAACGAAAGCCACATGACACTTATGACTGTGAAATATGTCccgagatatttttaaattacgataCACTTGCTGATCACTATCAGCTGATACACAATACTGATCCGGAgagaatgtttaaaaaaatgaagaccAGTAGTGGGGGTAAAAGACGAATGCGTaatcgtgaaaattttgaatgtgaaaattgtaaaaaacaattttgtacaaaaacattattttggAATCATATCAGTAATTGTacacgtaaaaataattatatgtcacgtaataataatgataataatactaCATCTACCTCGATACTTGaaacgcatttaaaaaataataatcttatTAAAAAGGAACCTAATGATGTATTGAAtgaatcaaatttaaatatacctgattttaatttatttgaagatATTAATTTACAGTTGTCTGGACATAAACCAGTGCCAAATTTAATGCCACTGTCTTCATCCCACAGAATGTCACCGATGAAATGCAATCGCAAGGACTCACGTAAAGTTTATGATGAATCGACCAATACTGTGTGCGCTTGTGAGGTCTGCGGTAAACAGTGGCCAGCTAAAAAACATCTATGGCAGCATTTAATAAGATTCCATCGGGCGGAAGCGGCTGTTACCTGCGGCGTATGTTTGAAATTGTGCACAACTTACCGCGGACTGTCCCAACACTTGAAAGAAGCTCATGAGGCTATTTTGTCATGCGAGGGAAATAATTTTACCTGCAAGACTTGCGGTAGGTATCACAATGCACGCAGTAAATTATTGCTACACATGAGCAttcatatcaataataatgagCACATTTGGTGTTCAAAGTGCGCGGTAAGTTTTGAAACTCAGGATAAACTCAACGCGCATATGGTTAATTGTGCTGTTAATAAGCAGAGACGCGATGAAGATGACgacaatgataatgataacgaCAATGATCATGACAATGACAATGATGATGagcatgataatgataatgatcaTGATCAAGATGATGAGCACGAGGAGAGAAGTGTTGATGGAGAAGATGTTAAGATGGACACTGAAGACAAGGGCAGTTTGATTGGTGATGGTGCTTCTTTGTTGGgtgaagatgatgatgatgagggTGAAGGTGAAGAAGAAGCAGAGGAAGAAGAAGATggtgaagaagaagaagaaattgAAGTAGAAGGTGAAGGTGAGGAAGGTGAAGAAGGTGATTTTGATTCTGAAGGTTTAGTCAATGGTGAGCATACTGAAGAATCTGCTTGCGAGAGTGATAGTGAAGAGCATGatcatgataatgataatgaaaatgaaaatgaaaatgaaaatgaaaatgaaacgATTGACAAAGAAGATAATTCTGACAGTGAAGAACATGAGGAGTCAGATGTTGAAAAGGATGAAGAAGATAAAGAATCTAAAGAACCAGAAGATGTAAGAGATAATGATACAGATGATGATGGACCACCGGTATTAAGTCCGATGATGCCGATTCACGAGGACGATGACAAAGTTGAAGAATTGAAAACTAAACAAGATATTCCTGAGTTAGATGGAATTGATAAAGAATTATTGGAAGGCAATTCTGGTTACTATGATGAGTTTAAAGATGAGTCGGAGGCAGATGACGACAGACTGCTGATTGAGCAGAACACCTCGGACTCGATAGTCGCTGAGACAGATGCTGAGGCTGGTGAGGATGCCGATGGGTTCGTAGAACAAGAAATGCAGATTAATGATCTGGATGGTACTGTTCTGATGGTTACCAACGACGCTGATGGTAACCAGATACTGATTCAGCAGAATGTCGAGGAAATAAATCAAGACGATGACGGCGAGTCGATACAAGACGTCGCTGATTTTATTTACCAAGTCGATGATGACAACTATGACGGCGATGCCCAGGTGGAGATCCAAGAGGTGCAGGATGAGGAAGATGACGATGAGCAACATGAAGAAGATGTTGATGAGGCTAATTCTAGTGCCAAAAAACGTGTCTCGAGGACGTAG
- Protein Sequence
- MESRERYDELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERKLPLKESSNDGLHNDMEKHSELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADQEIEEILEHSGTEEGLEDGEDRKYDDEYEMDMETNPSDFLEMPPMVTEDTEENDGSQLNSVRSPTLFQHKSEHHEVYVCSLCNKAFSSKGHLSLHARIHAGAGDVVGEKVITDDHTSFKRLYQCDLCNKSYSTAKHRWGHVSSNHRGHPAVTCRYCARLYSTRGNLMDHIKSRHTGQPPPPKLGIYVPTDNRFQCNTCPKMYTNITDLNKHKKVCTGIRESLNQQLKKRGKSLMDTSEASSFESDEDSKDYRTAEAKLSKNPQLTILKQALTRGVEVLKRDDRDPYKSLRVPQIDHTDAEGKRWFCETCPQSFTSIEALKDHEVVHESDKPFICLLCKKHFTLKSSLSRHIIATHGVDPGPMIDDEKCHKRKSLSSSTVLSIINDKQHHHSTRDDLKIKREPSELSFSPEPRTNADDEEDPDNNQQHDMIEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICTDNDQLLNHVNMYHGASKLQISEQRRYSCTICGRQHDSRKKLMTHVSIHNIDPSYDPANFVQLNSGYYSNENININNDGHNNQDLSTSAIDFDHEDGEKVDCFICYKSFPNEDHLIRHQRNAHKSDHVTTHAADHHLVAANTNGPANPNGNKAQYHLFFVCEICGSSHPSKWERWLHVSSVHSTETQIRCEREDCAKIFATKSLKNEHNQHHVLQGASPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVVQLSAHVKSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLELESYSNGINDTINDPAGTAPGPNPGAGAGAVSTAAVNNYETNAATEVDLTCEMCTDLLFPSWEDLCHHRRMIHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCKYCLKTSASKDHLTAHIAKIHRYEPETKQILKDANYKTQSVEEDTIHHCEKCNKAFHKRYLLKRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMTHNRVNHMNHPDLTCDHANCKKLFRTKEDLEVHRKDHKYHSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPQELKNHVESVHPGVLLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDADIRYHYEHIHNVPKDQLAGFENNSDPGGKGAGNDDGIKEEPDDLEYDDGVYDDIPRVKSSKRKPHDTYDCEICPEIFLNYDTLADHYQLIHNTDPERMFKKMKTSSGGKRRMRNRENFECENCKKQFCTKTLFWNHISNCTRKNNYMSRNNNDNNTTSTSILETHLKNNNLIKKEPNDVLNESNLNIPDFNLFEDINLQLSGHKPVPNLMPLSSSHRMSPMKCNRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYRGLSQHLKEAHEAILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINNNEHIWCSKCAVSFETQDKLNAHMVNCAVNKQRRDEDDDNDNDNDNDHDNDNDDEHDNDNDHDQDDEHEERSVDGEDVKMDTEDKGSLIGDGASLLGEDDDDEGEGEEEAEEEEDGEEEEEIEVEGEGEEGEEGDFDSEGLVNGEHTEESACESDSEEHDHDNDNENENENENENETIDKEDNSDSEEHEESDVEKDEEDKESKEPEDVRDNDTDDDGPPVLSPMMPIHEDDDKVEELKTKQDIPELDGIDKELLEGNSGYYDEFKDESEADDDRLLIEQNTSDSIVAETDAEAGEDADGFVEQEMQINDLDGTVLMVTNDADGNQILIQQNVEEINQDDDGESIQDVADFIYQVDDDNYDGDAQVEIQEVQDEEDDDEQHEEDVDEANSSAKKRVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01004521; iTF_01003727; iTF_00379812; iTF_00378210; iTF_00382054; iTF_01005464;
- 90% Identity
- iTF_01004521;
- 80% Identity
- -