Basic Information

Insect: Cotesia chilonis
Gene Symbol: -
Assembly: None
Location: scaffold13:2041652-2050670[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 4.2e-06 0.00033 20.6 1.0 1 23 207 229 207 229 0.98

2 31 0.0033 0.25 11.5 1.7 1 23 252 275 252 275 0.94

3 31 0.00041 0.032 14.4 0.8 2 23 282 304 281 304 0.96

4 31 0.0002 0.016 15.3 0.6 1 21 323 343 323 344 0.95

5 31 0.0038 0.3 11.3 0.1 3 23 433 453 431 453 0.95

6 31 0.00022 0.017 15.2 2.6 1 23 459 482 459 482 0.96

7 31 8e-05 0.0062 16.6 0.1 1 23 549 572 549 572 0.96

8 31 0.0033 0.26 11.5 0.5 1 23 578 601 578 601 0.96

9 31 0.1 7.8 6.8 1.9 1 23 614 636 614 636 0.97

10 31 2.8e-05 0.0021 18.0 1.1 3 23 685 706 684 706 0.96

11 31 7.1 5.5e+02 1.0 0.2 1 21 740 760 740 763 0.69

12 31 0.0036 0.28 11.4 1.2 2 23 770 793 769 793 0.93

13 31 2.1 1.6e+02 2.7 0.0 2 23 802 824 802 824 0.84

14 31 0.2 16 5.9 0.0 2 23 831 853 830 853 0.94

15 31 8.8e-06 0.00069 19.6 1.2 1 23 861 883 861 883 0.98

16 31 0.1 8 6.8 0.3 2 23 917 940 916 940 0.91

17 31 0.00014 0.011 15.8 3.3 1 23 943 966 943 966 0.97

18 31 0.00064 0.05 13.8 0.5 2 23 973 995 972 995 0.95

19 31 0.0011 0.084 13.0 5.2 1 21 1021 1041 1021 1042 0.95

20 31 0.0018 0.14 12.3 1.8 2 23 1056 1077 1055 1078 0.93

21 31 0.24 19 5.6 1.1 1 23 1081 1104 1081 1104 0.94

22 31 0.0097 0.75 10.0 1.7 2 23 1111 1134 1110 1134 0.91

23 31 0.65 51 4.3 0.2 2 23 1141 1163 1141 1163 0.95

24 31 3.5 2.7e+02 2.0 0.0 2 23 1170 1192 1169 1192 0.91

25 31 0.15 12 6.3 2.7 2 23 1201 1223 1201 1223 0.96

26 31 1.5 1.2e+02 3.1 1.7 2 23 1229 1251 1229 1251 0.92

27 31 0.13 10 6.5 0.0 1 23 1310 1333 1310 1333 0.94

28 31 0.34 26 5.2 1.3 2 23 1443 1465 1442 1465 0.94

29 31 0.58 45 4.4 0.8 2 23 1472 1494 1471 1494 0.95

30 31 0.47 37 4.7 2.5 1 23 1505 1527 1505 1527 0.97

31 31 0.09 7 7.0 0.1 3 20 1536 1553 1536 1555 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	4.2e-06	0.00033	20.6	1.0	1	23	207	229	207	229	0.98
2	31	0.0033	0.25	11.5	1.7	1	23	252	275	252	275	0.94
3	31	0.00041	0.032	14.4	0.8	2	23	282	304	281	304	0.96
4	31	0.0002	0.016	15.3	0.6	1	21	323	343	323	344	0.95
5	31	0.0038	0.3	11.3	0.1	3	23	433	453	431	453	0.95
6	31	0.00022	0.017	15.2	2.6	1	23	459	482	459	482	0.96
7	31	8e-05	0.0062	16.6	0.1	1	23	549	572	549	572	0.96
8	31	0.0033	0.26	11.5	0.5	1	23	578	601	578	601	0.96
9	31	0.1	7.8	6.8	1.9	1	23	614	636	614	636	0.97
10	31	2.8e-05	0.0021	18.0	1.1	3	23	685	706	684	706	0.96
11	31	7.1	5.5e+02	1.0	0.2	1	21	740	760	740	763	0.69
12	31	0.0036	0.28	11.4	1.2	2	23	770	793	769	793	0.93
13	31	2.1	1.6e+02	2.7	0.0	2	23	802	824	802	824	0.84
14	31	0.2	16	5.9	0.0	2	23	831	853	830	853	0.94
15	31	8.8e-06	0.00069	19.6	1.2	1	23	861	883	861	883	0.98
16	31	0.1	8	6.8	0.3	2	23	917	940	916	940	0.91
17	31	0.00014	0.011	15.8	3.3	1	23	943	966	943	966	0.97
18	31	0.00064	0.05	13.8	0.5	2	23	973	995	972	995	0.95
19	31	0.0011	0.084	13.0	5.2	1	21	1021	1041	1021	1042	0.95
20	31	0.0018	0.14	12.3	1.8	2	23	1056	1077	1055	1078	0.93
21	31	0.24	19	5.6	1.1	1	23	1081	1104	1081	1104	0.94
22	31	0.0097	0.75	10.0	1.7	2	23	1111	1134	1110	1134	0.91
23	31	0.65	51	4.3	0.2	2	23	1141	1163	1141	1163	0.95
24	31	3.5	2.7e+02	2.0	0.0	2	23	1170	1192	1169	1192	0.91
25	31	0.15	12	6.3	2.7	2	23	1201	1223	1201	1223	0.96
26	31	1.5	1.2e+02	3.1	1.7	2	23	1229	1251	1229	1251	0.92
27	31	0.13	10	6.5	0.0	1	23	1310	1333	1310	1333	0.94
28	31	0.34	26	5.2	1.3	2	23	1443	1465	1442	1465	0.94
29	31	0.58	45	4.4	0.8	2	23	1472	1494	1471	1494	0.95
30	31	0.47	37	4.7	2.5	1	23	1505	1527	1505	1527	0.97
31	31	0.09	7	7.0	0.1	3	20	1536	1553	1536	1555	0.96

Sequence Information

Coding Sequence: ATGGAGTCGAGAGAACGTTACGACGAGCTGTGTCGCCTGTGTGCATCTTACGATGCGGTTAAAATGGATATATTTGGACAAGAAGGAAAAAATCGTCAGCTAGTTGATAAAATAGAGACTTGTCTACCATTCAAGATTGATGAAGATGACAGATTACCAAAATGTTTGTGTTACCGTTGTATGTACAATCTGGAAAATTTTTACGATTTTCGAACGGCTTGCGTCAATGCTGTCGCGCTGTTGGAAAGAAAATTACCTCCAAAAGAATCTGTGAAGTTGCGCTCAGAGTTACTTAAGGAAAAAGAAAAGATGCCAATTCTTATACCTGAAGCACCGATAGTTAATCCGAATGCGGCGTTGGGTACTCCACCAAGATTAAATTCTGACGGTGAAGCAGATCAGGAAATTGAAGAAATTCTTGAACACAGTGGAACTGAAGAAGATGGCGAGGACAGAAAATACGACGACGAGTACGAAATGGACATGGAGACAAACCCAAGTGATTTTTTGGAAATGCCTCCAATGGTAACAGAAGACCCAGAAGAAACGGACCCGCGGCAGCTGAACTCATCGCGCTCACCAGCGTTGTTTCAACACAAATCGGAGCACCATGAAGTCTACGTATGTTCATTATGCAACAAAGCATTCAGTTCGAAAGGCCACCTGTCACTGCACGCGCGAATTCACGCCGGAGCTGGGGACGTAGTGGGTGAAAAGGTAATCACAGACGACCACACATCCTTCAAGCGGCTGTACCAATGTGACCTCTGCAACAAATCCTACTCAACAGCCAAGCACCGGTGGGGTCACGTGTCCTCAAACCACCGCGGACACCCAGCAGTAACGTGTCAGTACTGCTCACGTTTGTACTCGACACGTGGAAATCTAATGGACCACATAAAGTCCCGACACACTGGGCAGCCTCCGCCCCCGAAACTCGGCGTCTACGTCCCCTCGGACAATCGATTCCAGTGTAACACGTGCCCGAAGATGTACACCAACATCACGGACTTGAACAAGCACAAAAAAGTCTGCACTGGCATCCGCGAATCAATAAGCTTGCTGTTGAAAAAGAAAGGCAAGAGTCTTATGGACACCTCAGAAGCTTCGAGCTTCGAGTCCGACGAGGACAGCAAAGACTACCGCACTGCCGAGGCTAAACTGTCAAAAAATCCCCAGCTGACTATTCTAAAGCAAGCTTTGACTCGCGGAGCCGAAGGACTTAAGCGCGACGACCGCGATCCTTATAAATCCCTACGCGTGCCTCAAGTTGATCCAGAAGGCAAGAGATGGTTCTGCGAGACCTGTCCGCAGTCGTTTACTTCCATCGAAGCTTTAAAAGACCACGAGGTCACTCACGAGTCCGACAAACCCTTTGTCTGTCTTTTGTGCAAAAAACATTTTACACTCAAGTCGTCTCTCAGTCGGCATATCATCTCATCCCACGGCGTAGATCCAGCTCCGATGCTAGACGACGAAAAGTGTCTCAAAAAAAAATTCTCTACTTCAAATGACAAGCACAGTAATCAATCTCGCGAGGAAGTTAAAATAAAACGCGAGCCTTCTTTTTCTCCAGAAGATGTCAATGCTGATGACGAAGAAGAAGAGGCTCAGCAGCAAGATATGATTGAAATAGAAACAGTATTTGTATGTGAAATTTGCACTCGTGATTTTAACGACCGTGCTTCTTTGTGGCTTCACATACGCGCGACTCACAAAGAGTACGCAGCATTTGCCTGTGGTGTATGTTTAAAAATCTGCACGGACAATGATCAATTGTTGAATCACGTAAATATGTACCACGGTGCTTCTAAGCTTCAGATATCCGAACAACGGCGCTACAGTTGTACCATTTGCGGCAGACAGCATGACTCACGTAAGAAATTAATGACCCACGTGTCAATTCACAATATAGATCCTTCCTACGACCCAGCTAACTTTGTCCAGCTAAACAGCGGGTATTACAGCAATGAGAATATAAATGACAGCACTCAAGATCACAGATTAAATCCAACGGTGGACTTTGACCACGAGGACGGTGAGAAGGTCGATTGTTTTATCTGCTACAAGTCTTTTCCAAATGAAGACCACCTGATCCGTCACCAGCGCAACGCGCATAAAGAGCAGACTCCTTTTGCAGCTGATCATCATCTTGCTGTCAATACTGCCAGCAGTCCTGCGAATCCGAATGGGAACAAAGCGCAGTATCACTTATTTTTCGTGTGTGAAATTTGCGGAAGCTCCCACCCAAGCAAATGGGAACGCTGGTTACACGTCAGCAGTGTTCACAGCTCAGAAACGCAGATTAGGTGCGAGCGCGAGGACTGCGGTAAAATATTTTCTACCAAGTCGCTGAAAAATGAACATGCTCAGCATCATGTCTTGCAAGGCGCGTCGCCTAATACTTGTGAAATTTGCGGAAAACTTTGGGGCAGCCGAGTCGATTATTGGAAACACGTCATGGGTGTCCATTCCGACACTGTTCCTCTAATTTGCGGCGTTTGCTTGAAAGTATTCCCGGATGTTATTCAATTGAGCGGTCATGTTAAGAGCAAACACTGGCCGCTGACCAACGGGGACTTTAGTTGCGACATTTGCGGGCGTCCTTATTCAAATAAATCCAAAATGTCGAGACACCGTAAAATTCATGGTCTAGAAATTGAGAGTTACAGCAATGGCGTTAATGAGTCGGTGAGTCAAGTAATACCAGCCAGTACGTATGAAACAAATACAGCTGAAGTTGATTTGACTTGTGAATTGTGCACGGACTTGATATTCCCCAGCTGGGAAGACTTGTGCCAGCACAGAAGAATAGTCCACGGATTATTCCCGTGTGATTTGTGTAACAAATGCTACGGAAGGACTTCTCACTTGTGGAAGCACGTTAATCGAGTTCACAAAGGCCACAAGGACGTTACTTGTAAGTATTGTTTAAAAACTAGCGCTTCCAAGGATCATTTAGCGGCGCACATTGCTAAAATTCATCGCTACGAGCCAGAAAGCAAGAAAGTCCTCAAAGAAACTAATTATAAAACTCCGGTTGTTGAAGAAGACACGATTCATCACTGCGAAAAGTGCAACAAAGCTTTCCACAAGAGATATTTATTGAAGAGACACATGAAAGGCTGTCAAAATTATCGGAAGGATCCGGGAGCGTTGTTGACCCGCTGCAGAGCTTGCGAGAGAATTTTTAAGGACCGGGCGAGCTTGCAGAAGCACATTGAGAATCATCACAGCAGCTACACGTGCCATTTGTGCAATGAGACGATTACTTCCAAGCTGGGAATTATGACACACAATCGTGTTAATCATATGAATCATCCGGACTTGACTTGTGATCATGCGAGTTGTAAAAAATTATTCCGGACTAAAGAAGATCTTGAAGCTCATCGCAAGGATCATAAATATCACTCGCCGAATGTTTGCGATTTTTGCGGAGATACTGTCGAGAATAAATTGAAATTAAAAATGCATATTTTGTCGCTGCATCGGAATGAAATTGGTGTGTCTTGTGGGGTTTGTTTGATACCGATGAAAGATCCGCAAGAATTGAAGAATCACGTGGAGAGTGTTCATCCAGGAGTTTTGTTAAAAGCAAATACTTGTCAGGTCTGCGGAAAACAGTACGCTTCCAAGTGGAAGGCTTTTGATCACACGAAAAAATGCCACGGTAAAGTTTTTCGGACTTGCAAACAATGTCTTGCTGTTTTTACGACTGACGCTGATATTAGACATCACTACGAGCATGTTCATAATGTGCCTAAGGATCAGCTTGCGGGATTTGAAAATAATTCTGATGGTGGTGGTAAAGGAGCCGGACATGATGATGGAATTAAAGAAGAGCCAGATGATCTTGATTTTGATGATAGTGTTTATGATGAATTACCCAGAGTTAATAAATCAACTAAACGCAAACCTCAAGACACTTATGACTGTGAAATATGCCCGGAAATATTTTTAAATTATGAAACTTTGGCTGATCATTATCAGCTTATTCACAATACCGATCCAGAAAGAATGTTTAAAAAAATGAAAACAAATAGCGACGAATGCGTAATCGTGAAAATTTTGAATGTGAAAATTGTAAAAAACAATTTTGTACAAAAACATTATTTTGGAATCATATCAGAGCCTGTTGATATTATAAATGAGTCTAATTTAAATATACCTGATTTTAATTTATTTGAAGATATTAATTTGCAGTTATCTGGACACAAACCAGTGCCAAATTTAATGCCACTGTCTTCATCACACCGAATGTCCCCGATGAAATGCAACCGCAAGGATTCTAGAAAAGTTTATGACGAGTCGACAAATACAGTGTGCGCTTGCGAAGTTTGTGGGAAGCAGTGGCCAGCTAAGAAGCACCTCTGGCAGCATTTGATCCGATTTCATAGAGCTGAGGCGGCTGTTACTTGCGGAGTATGCTTGAAATTGTGTACGACCTACCGCGGATTGTCGCAGCATCTTAAGGAAGCTCATGAAGCTATTTTGTCTTGTGAGGGGAATAATTTTACTTGCAAGACTTGCGGGAGGTATCACAATGCTCGGAGTAAGCTGTTGCTTCATATGAGCATTCATATCAATAATAATGAGCACATTTGGTGCTCTAAATGTGCGCTTAGTTTTGATAGCGAGGAGAAACTTGAAGCTCATATGGCTAATTGTGTTGAGTTATTGGAGAGCAACTCTGGATACTATGGCTCGGAGGTTGATGATGAAAGAGGGCTGAATGAAAATACTTTGGATTCTATGGCTGAGAATGATGGAGAGTTTGAGGAGCAAATTAGGATTAATGACACTGTTCTGATGGTCACCAATGATGATGAGGGAAATGAAATTGTCATTGAACAGAATGTGGAAGAAATTAATGAAAATGATGATGGCGAGTCGATTCAAGACGTAGCGGATTTTATTTATCAAGTCGATCCGGATAATTATGATGGAGATAGCCAGGAGGTTCAGGAGGAAGAGGAAGAGGATCATGATGTTAATGATGATCAAGAGGCTAATTCTAGTGCCAAAAAACGTGTCTCGAGGACGTAG
Protein Sequence: MESRERYDELCRLCASYDAVKMDIFGQEGKNRQLVDKIETCLPFKIDEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERKLPPKESVKLRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADQEIEEILEHSGTEEDGEDRKYDDEYEMDMETNPSDFLEMPPMVTEDPEETDPRQLNSSRSPALFQHKSEHHEVYVCSLCNKAFSSKGHLSLHARIHAGAGDVVGEKVITDDHTSFKRLYQCDLCNKSYSTAKHRWGHVSSNHRGHPAVTCQYCSRLYSTRGNLMDHIKSRHTGQPPPPKLGVYVPSDNRFQCNTCPKMYTNITDLNKHKKVCTGIRESISLLLKKKGKSLMDTSEASSFESDEDSKDYRTAEAKLSKNPQLTILKQALTRGAEGLKRDDRDPYKSLRVPQVDPEGKRWFCETCPQSFTSIEALKDHEVTHESDKPFVCLLCKKHFTLKSSLSRHIISSHGVDPAPMLDDEKCLKKKFSTSNDKHSNQSREEVKIKREPSFSPEDVNADDEEEEAQQQDMIEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICTDNDQLLNHVNMYHGASKLQISEQRRYSCTICGRQHDSRKKLMTHVSIHNIDPSYDPANFVQLNSGYYSNENINDSTQDHRLNPTVDFDHEDGEKVDCFICYKSFPNEDHLIRHQRNAHKEQTPFAADHHLAVNTASSPANPNGNKAQYHLFFVCEICGSSHPSKWERWLHVSSVHSSETQIRCEREDCGKIFSTKSLKNEHAQHHVLQGASPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVIQLSGHVKSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLEIESYSNGVNESVSQVIPASTYETNTAEVDLTCELCTDLIFPSWEDLCQHRRIVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCKYCLKTSASKDHLAAHIAKIHRYEPESKKVLKETNYKTPVVEEDTIHHCEKCNKAFHKRYLLKRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMTHNRVNHMNHPDLTCDHASCKKLFRTKEDLEAHRKDHKYHSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPQELKNHVESVHPGVLLKANTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDADIRHHYEHVHNVPKDQLAGFENNSDGGGKGAGHDDGIKEEPDDLDFDDSVYDELPRVNKSTKRKPQDTYDCEICPEIFLNYETLADHYQLIHNTDPERMFKKMKTNSDECVIVKILNVKIVKNNFVQKHYFGIISEPVDIINESNLNIPDFNLFEDINLQLSGHKPVPNLMPLSSSHRMSPMKCNRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYRGLSQHLKEAHEAILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINNNEHIWCSKCALSFDSEEKLEAHMANCVELLESNSGYYGSEVDDERGLNENTLDSMAENDGEFEEQIRINDTVLMVTNDDEGNEIVIEQNVEEINENDDGESIQDVADFIYQVDPDNYDGDSQEVQEEEEEDHDVNDDQEANSSAKKRVSRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01006486;
90% Identity: -
80% Identity: -