Basic Information

Insect: Cotesia sesamiae
Gene Symbol: -
Assembly: None
Location: scaffold:4835-11578[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 4.5e-06 0.00045 20.5 1.0 1 23 215 237 215 237 0.98

2 30 0.0035 0.35 11.4 1.7 1 23 260 283 260 283 0.94

3 30 0.00044 0.044 14.3 0.8 2 23 290 312 289 312 0.96

4 30 0.00021 0.021 15.2 0.6 1 21 331 351 331 352 0.95

5 30 0.0041 0.41 11.2 0.1 3 23 445 465 443 465 0.95

6 30 9.6e-05 0.0096 16.3 2.7 1 23 471 494 471 494 0.96

7 30 8.6e-05 0.0085 16.5 0.1 1 23 561 584 561 584 0.96

8 30 0.0035 0.35 11.4 0.5 1 23 590 613 590 613 0.96

9 30 0.11 11 6.7 1.9 1 23 626 648 626 648 0.97

10 30 2.9e-05 0.0029 18.0 1.1 3 23 697 718 696 718 0.96

11 30 7.6 7.6e+02 0.9 0.2 1 21 752 772 752 775 0.69

12 30 0.0038 0.38 11.3 1.2 2 23 782 805 781 805 0.93

13 30 2.3 2.3e+02 2.6 0.0 2 23 814 836 814 836 0.84

14 30 0.21 21 5.8 0.0 2 23 843 865 842 865 0.94

15 30 9.4e-06 0.00094 19.5 1.2 1 23 873 895 873 895 0.98

16 30 0.11 11 6.7 0.3 2 23 929 952 928 952 0.91

17 30 0.00015 0.015 15.7 3.3 1 23 955 978 955 978 0.97

18 30 0.00068 0.068 13.7 0.5 2 23 985 1007 984 1007 0.95

19 30 0.0011 0.11 12.9 5.2 1 21 1033 1053 1033 1054 0.95

20 30 0.002 0.19 12.2 1.8 2 23 1068 1089 1067 1090 0.93

21 30 0.26 26 5.5 1.1 1 23 1093 1116 1093 1116 0.94

22 30 0.01 1 9.9 1.7 2 23 1123 1146 1122 1146 0.91

23 30 0.7 70 4.2 0.2 2 23 1153 1175 1153 1175 0.95

24 30 3.8 3.7e+02 1.9 0.0 2 23 1182 1204 1181 1204 0.91

25 30 0.16 16 6.2 2.7 2 23 1213 1235 1213 1235 0.96

26 30 1.6 1.6e+02 3.0 1.7 2 23 1241 1263 1241 1263 0.92

27 30 0.14 14 6.4 0.0 1 23 1322 1345 1322 1345 0.94

28 30 0.0023 0.23 12.0 2.8 1 20 1371 1390 1371 1392 0.95

29 30 0.36 36 5.1 1.3 2 23 1493 1515 1492 1515 0.94

30 30 0.62 62 4.3 0.8 2 23 1522 1544 1521 1544 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	4.5e-06	0.00045	20.5	1.0	1	23	215	237	215	237	0.98
2	30	0.0035	0.35	11.4	1.7	1	23	260	283	260	283	0.94
3	30	0.00044	0.044	14.3	0.8	2	23	290	312	289	312	0.96
4	30	0.00021	0.021	15.2	0.6	1	21	331	351	331	352	0.95
5	30	0.0041	0.41	11.2	0.1	3	23	445	465	443	465	0.95
6	30	9.6e-05	0.0096	16.3	2.7	1	23	471	494	471	494	0.96
7	30	8.6e-05	0.0085	16.5	0.1	1	23	561	584	561	584	0.96
8	30	0.0035	0.35	11.4	0.5	1	23	590	613	590	613	0.96
9	30	0.11	11	6.7	1.9	1	23	626	648	626	648	0.97
10	30	2.9e-05	0.0029	18.0	1.1	3	23	697	718	696	718	0.96
11	30	7.6	7.6e+02	0.9	0.2	1	21	752	772	752	775	0.69
12	30	0.0038	0.38	11.3	1.2	2	23	782	805	781	805	0.93
13	30	2.3	2.3e+02	2.6	0.0	2	23	814	836	814	836	0.84
14	30	0.21	21	5.8	0.0	2	23	843	865	842	865	0.94
15	30	9.4e-06	0.00094	19.5	1.2	1	23	873	895	873	895	0.98
16	30	0.11	11	6.7	0.3	2	23	929	952	928	952	0.91
17	30	0.00015	0.015	15.7	3.3	1	23	955	978	955	978	0.97
18	30	0.00068	0.068	13.7	0.5	2	23	985	1007	984	1007	0.95
19	30	0.0011	0.11	12.9	5.2	1	21	1033	1053	1033	1054	0.95
20	30	0.002	0.19	12.2	1.8	2	23	1068	1089	1067	1090	0.93
21	30	0.26	26	5.5	1.1	1	23	1093	1116	1093	1116	0.94
22	30	0.01	1	9.9	1.7	2	23	1123	1146	1122	1146	0.91
23	30	0.7	70	4.2	0.2	2	23	1153	1175	1153	1175	0.95
24	30	3.8	3.7e+02	1.9	0.0	2	23	1182	1204	1181	1204	0.91
25	30	0.16	16	6.2	2.7	2	23	1213	1235	1213	1235	0.96
26	30	1.6	1.6e+02	3.0	1.7	2	23	1241	1263	1241	1263	0.92
27	30	0.14	14	6.4	0.0	1	23	1322	1345	1322	1345	0.94
28	30	0.0023	0.23	12.0	2.8	1	20	1371	1390	1371	1392	0.95
29	30	0.36	36	5.1	1.3	2	23	1493	1515	1492	1515	0.94
30	30	0.62	62	4.3	0.8	2	23	1522	1544	1521	1544	0.95

Sequence Information

Coding Sequence: ATGTCTTCTGTTGAAGATGCTGACGGTGGCTGCATTTCGGAGTATTTTCCGTTGGGCCCCCAGAAAGAGAAACTGCTGTTGTATTATTATTCTCCGGCAAGACGAGTCTTGCAAGTTAACTGCCTGGCAGTTGCCTCAACTTCAAAACCCAGCACATGTTCGTTCTCTGCTACGGTCATTGATGAAGATGACAGATTACCAAAATGTTTGTGTTACCGTTGTATGTACAATCTGGAAAATTTTTACGATTTTCGAACGGCTTGCGTCAATGCTGTCGCGCTGTTGGAAAGAAAATTACCTCCAAAAGAATCTGAAAAAGAAAAGATGCCAATTCTTATACCTGAAGCACCGATAGTTAATCCGAATGCGGCGTTGGGTACTCCACCAAGATTAAATTCTGACGGTGAAGCCGATCAGGAAATTGAAGAAATTCTTGAACACAGTGGAACTGAAGAAGGTTTAGAAGATGGCGAGGACAGAAAATACGACGACGAGTACGAAATGGACATGGAGACAAACCCAAGTGATTTTTTGGAAATGCCTCCAATGGTAACAGAAGACCCAGAAGAAACGGACCCGCGGCAGCTGAACTCATCGCGCTCACCAGCGTTGTTTCAACACAAATCGGAGCACCATGAAGTCTACGTATGTTCATTATGCAACAAAGCATTCAGTTCGAAAGGCCACCTGTCACTGCACGCGCGAATTCACGCCGGAGCTGGGGACGTAGTGGGTGAAAAGGTAATCACAGACGACCACACATCCTTCAAGCGGCTGTACCAATGTGACCTCTGCAACAAATCCTACTCAACAGCCAAGCACCGGTGGGGTCACGTGTCCTCAAACCACCGCGGACACCCAGCAGTAACGTGTCAGTACTGCTCACGTTTGTACTCGACACGTGGAAATCTAATGGACCACATAAAGTCCCGACACACTGGGCAGCCTCCGCCCCCGAAACTCGGCGTCTACGTCCCCTCGGACAATCGATTCCAGTGTAACACGTGCCCGAAGATGTACACCAACATCACGGACTTGAACAAGCACAAAAAAGTCTGCACTGGCATCCGTGAATCAATAAGCTTGCTGTTGAAAAAGAAAGGCAAGAGTCTTATGGACACCTCAGAAGCTTCGAGCTTCGAGTCCGACGAGGACAGCAAAGATTACCGCACAGCCGAGGCTAAACTGTCAAAAAATCCCCAGCTGACTATTCTAAAGCAAGCTTTGACTCGCGGAGCCGAAGGACTTAAGCGCGACGACCGCGATCCTTATAAATCCCTACGCGTGCCTCAAGTTGACGCTCAAGTTGACCCAGAAGGCAAGAGATGGTTCTGCGAGACCTGTCCGCAGTCGTTTACTTCCATCGAAGCTTTAAAAGACCACGAGGTCACTCACGAGTCCGACAAACCCTTTGTCTGTCTTCTGTGCAAAAAACATTTTACACTCAAGTCGTCTCTCAATCGGCATATCATCTCATCCCACGGCGTAGATCCAGCTCCGATGCTAGACGACGAAAAGTGTCTCAAAAAAAAATTCTCTGCTTCAAATGACAAGCACAGTAATCAATCTCGCGAGGAAGTTAAAATAAAACGCGAGCCTTCTTTTTCTCCAGAAGATGTCAATGCTGATGACGAAGAAGAAGAAGCTCAGCAGCAAGATATGATTGAAATAGAAACAGTATTTGTATGTGAAATTTGCACTCGTGATTTTAACGACCGTGCTTCTTTGTGGCTTCACATACGCGCGACTCACAAAGAGTACGCAGCATTTGCCTGTGGTGTGTGTTTAAAAATCTGCACGGACAATGATCAATTGTTGAATCACGTAAATATGTACCACGGTGCTTCTAAGCTTCAGATATCCGAACAACGGCGCTACAGTTGTACCATTTGCGGCAGACAGCATGACTCACGTAAGAAATTAATGACCCACGTGTCAATTCACAATATAGATCCTTCCTACGACCCAGCTAACTTTGTCCAGCTAAACAGCGGGTATTACAGCAATGAAAATATAAATGACAGCACTCAAGATCACAGATTAAATCCAACGGTGGACTTTGACCACGAGGACGGTGAGAAGGTCGATTGTTTTATCTGCTACAAGTCTTTTCCAAATGAAGACCACCTGATCCGTCACCAGCGCAACGCGCATAAAGAGCAGACTCCTTTTGCAGCTGATCATCATCTTGCTGTCAATGCTGCAAGCAGTCCTGCGAATCCAAATGGGAACAAAGCGCAGTATCACTTATTTTTCGTGTGTGAAATTTGCGGAAGCTCCCACCCAAGCAAATGGGAACGCTGGTTACACGTCAGCAGTGTTCACAGCTCAGAAACGCAGATTAGGTGCGAGCGCGAGGACTGCGGTAAAATATTTTCTACCAAGTCGCTGAAAAATGAACATGCTCAGCATCATGTCTTGCAAGGCGCGTCGCCTAATACTTGTGAAATTTGCGGAAAACTTTGGGGCAGCCGAGTCGATTATTGGAAACACGTCATGGGTGTCCATTCCGACACTGTTCCTCTAATTTGCGGCGTTTGCTTGAAAGTATTCCCAGATGTTATTCAATTGAGCGGTCATGTTAAAAGCAAACACTGGCCGCTGACCAACGGGGACTTTAGTTGCGACATTTGCGGGCGTCCTTATTCAAATAAATCCAAAATGTCGAGACACCGTAAAATTCATGGTCTAGAAATTGAGAGTTACAGCAATGGCGTTAATGAGTCGGTGAGTCAAGTAATACCAGCCAGTACGTATGAAACAAATACAGCTGAAGTTGATTTGACTTGTGAATTGTGCACGGACTTGATATTCCCCAGCTGGGAAGACTTGTGCCAGCACAGAAGAATAGTCCACGGATTATTCCCGTGTGATTTGTGTAACAAATGCTACGGAAGGACTTCTCACTTGTGGAAGCACGTTAATCGAGTTCACAAAGGCCACAAGGACGTTACTTGTAAGTATTGTTTAAAAACGAGCGCTTCCAAGGATCATTTAGCGGCGCACATTGCTAAAATTCATCGTTACGAGCCAGAAAGCAAGAAAGTCCTCAAAGAAACTAATTATAAAACTCCGGTTGTTGAAGAAGACACGATTCATCACTGCGAAAAGTGCAACAAAGCTTTCCACAAGAGATATTTATTGAAGAGACACATGAAAGGCTGTCAAAATTATCGGAAGGATCCGGGAGCGTTGTTGACCCGCTGCAGAGCTTGCGAGAGAATTTTTAAGGACCGGGCGAGCTTGCAGAAGCACATTGAGAATCATCACAGCAGCTACACGTGCCATTTGTGCAATGAGACGATTACTTCCAAGCTGGGAATTATGACACACAATCGTGTTAATCATATGAATCATCCGGACTTGACTTGTGATCATGCGAGTTGTAAAAAATTATTCCGGACTAAAGAAGATCTTGAAGCTCATCGCAAGGATCATAAATATCACTCTCCGAATGTTTGCGATTTTTGCGGAGATACTGTCGAGAATAAATTGAAATTAAAAATGCATATTTTGTCGCTGCATCGGAATGAAATTGGTGTGTCTTGTGGGGTTTGTTTGATACCGATGAAAGATCCGCAAGAATTGAAGAATCACGTGGAGAGTGTTCATCCAGGAGTTTTGTTAAAAGCAAACACCTGTCAGGTCTGCGGAAAACAGTACGCTTCCAAGTGGAAGGCTTTTGATCACACGAAAAAATGCCACGGTAAAGTTTTTCGGACTTGCAAACAATGTCTTGCTGTTTTTACGACTGACGCTGATATTAGACATCACTACGAGCATGTTCATAATGTGCCTAAGGATCAGCTTGCGGGATTTGAAAATAATTCTGATGGTGGTGGTAAAGGAGCCGGACATGATGATGGAATTAAAGAAGAGCCAGATGATCTTGATTTTGATGATAGTGTTTATGATGAATTACCTAAAGTTAATAAATCAACTAAACGCAAACCTCAAGACACTTATGACTGTGAAATATGCCCGGAAATATTTTTAAATTATGAAACTTTGGCTGATCATTATCAGCTTATTCACAATACCGATCCAGAAAGAATGTTTAAAAAAATGAAAACAAATAGCGGTAAAAGACGAATGCGTAATCGTGAAAATTTTGAATGTGAAAATTGTAAAAAACAATTTTGTACAAAAACATTATTTTGGAATCATATCAGTAATTGTACGCGTAAAAATAATTTATCAAAAAATAATAATGATAATACTACTACAACTACCTCGATACTTGAAACGCATTTAAAAAATAATAATATGATTAAAAAGGAGCCTGTTGATATTATAAATGAGTCTAATTTAAATATACCTGATTTTAATTTATTTGAAGATATTAATTTGCAGTTATCTGGACACAAACCAGTGCCAAATTTAATGCCACTGTCTTCATCACACCGAATGTCTCCGATGAAATGCAACCGCAAGGATTCTAGAAAAGTTTATGACGAGTCGACAAATACAGTGTGCGCTTGCGAAGTTTGTGGGAAACAGTGGCCAGCTAAGAAGCACCTCTGGCAGCATTTGATCCGATTTCATAGAGCTGAGGCGGCTGTTACTTGCGGTGTATGCTTGAAATTGTGCACGACCTACCGCGGATTATCGCAGCATCTTAAGGAAGCTCATGAAGCTATTTTGTCTTGTGAGGGGAATAATTTTACTTGCAAGACTTGCGGGAGGTATCACAATGCTCGGAACCTGGTCAATGGTGAACACAGTGAAGAGTCTGCTTGTGAATCTGACAGTGAAAATGAACACGAGAATGAAACTATTGAGAGAGAGGACAACTCCAATAGCAACTCCAACAGCAACAGCAACAACGACAGCGATGACTCGGATGAAGAAGAAAAAAAGGAGAAAGAAAATGTCAGAGACAATGACACTGATGATGATGGACCCCCGGTTCTTAGTCCCATAATGCCGATTCATGAGAACAAGTCTCGCAGGGTGAAATCTAAAAAAAACATTCCTGAGCTGGATGATAAGGAGTTATTGGAGAGCAACTCTGGATACTATGGCTCGGAGGTTGATGATGAAAGAGGGCTGAATGAAAATACTTTGGATTCTATGGCTGAGAATGATGGAGAGTTTGAGGAGCAAATTAGGATTAATGACACTGTTCTGATGGTCACCAATGATGATGAGGGAAATGAAATTGTCATTGAACAGAATGTGGAAGAAATTAATGAAAATGATGATGGCGAGTCAATTCAAGACGTAGCGGATTTTATTTATCAAGTCGATCCGGATAATTATGATGGAGATAGCCAGGAGGTTCAGGAGGAAGAGGAGGAGGAGGTGCAGGAGGAAGAGGAAGAGGATCATGATGTTAATGATGATCAAGAGGCTAATTCTAGTGCCAAAAAACGTGTCTCGAGGACGTAG
Protein Sequence: MSSVEDADGGCISEYFPLGPQKEKLLLYYYSPARRVLQVNCLAVASTSKPSTCSFSATVIDEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERKLPPKESEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADQEIEEILEHSGTEEGLEDGEDRKYDDEYEMDMETNPSDFLEMPPMVTEDPEETDPRQLNSSRSPALFQHKSEHHEVYVCSLCNKAFSSKGHLSLHARIHAGAGDVVGEKVITDDHTSFKRLYQCDLCNKSYSTAKHRWGHVSSNHRGHPAVTCQYCSRLYSTRGNLMDHIKSRHTGQPPPPKLGVYVPSDNRFQCNTCPKMYTNITDLNKHKKVCTGIRESISLLLKKKGKSLMDTSEASSFESDEDSKDYRTAEAKLSKNPQLTILKQALTRGAEGLKRDDRDPYKSLRVPQVDAQVDPEGKRWFCETCPQSFTSIEALKDHEVTHESDKPFVCLLCKKHFTLKSSLNRHIISSHGVDPAPMLDDEKCLKKKFSASNDKHSNQSREEVKIKREPSFSPEDVNADDEEEEAQQQDMIEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICTDNDQLLNHVNMYHGASKLQISEQRRYSCTICGRQHDSRKKLMTHVSIHNIDPSYDPANFVQLNSGYYSNENINDSTQDHRLNPTVDFDHEDGEKVDCFICYKSFPNEDHLIRHQRNAHKEQTPFAADHHLAVNAASSPANPNGNKAQYHLFFVCEICGSSHPSKWERWLHVSSVHSSETQIRCEREDCGKIFSTKSLKNEHAQHHVLQGASPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVIQLSGHVKSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLEIESYSNGVNESVSQVIPASTYETNTAEVDLTCELCTDLIFPSWEDLCQHRRIVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCKYCLKTSASKDHLAAHIAKIHRYEPESKKVLKETNYKTPVVEEDTIHHCEKCNKAFHKRYLLKRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMTHNRVNHMNHPDLTCDHASCKKLFRTKEDLEAHRKDHKYHSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPQELKNHVESVHPGVLLKANTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDADIRHHYEHVHNVPKDQLAGFENNSDGGGKGAGHDDGIKEEPDDLDFDDSVYDELPKVNKSTKRKPQDTYDCEICPEIFLNYETLADHYQLIHNTDPERMFKKMKTNSGKRRMRNRENFECENCKKQFCTKTLFWNHISNCTRKNNLSKNNNDNTTTTTSILETHLKNNNMIKKEPVDIINESNLNIPDFNLFEDINLQLSGHKPVPNLMPLSSSHRMSPMKCNRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYRGLSQHLKEAHEAILSCEGNNFTCKTCGRYHNARNLVNGEHSEESACESDSENEHENETIEREDNSNSNSNSNSNNDSDDSDEEEKKEKENVRDNDTDDDGPPVLSPIMPIHENKSRRVKSKKNIPELDDKELLESNSGYYGSEVDDERGLNENTLDSMAENDGEFEEQIRINDTVLMVTNDDEGNEIVIEQNVEEINENDDGESIQDVADFIYQVDPDNYDGDSQEVQEEEEEEVQEEEEEDHDVNDDQEANSSAKKRVSRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01006486;
90% Identity: -
80% Identity: -