Basic Information

Insect: Cotesia flavipes
Gene Symbol: -
Assembly: None
Location: scaffold:9106-18032[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 4.9e-06 0.00048 20.4 1.0 1 23 217 239 217 239 0.98

2 32 0.0038 0.37 11.3 1.7 1 23 262 285 262 285 0.94

3 32 0.00047 0.046 14.1 0.8 2 23 292 314 291 314 0.96

4 32 0.00023 0.023 15.1 0.6 1 21 333 353 333 354 0.95

5 32 0.0044 0.43 11.1 0.1 3 23 447 467 445 467 0.95

6 32 0.00026 0.025 15.0 2.6 1 23 473 496 473 496 0.96

7 32 9.2e-05 0.0091 16.4 0.1 1 23 563 586 563 586 0.96

8 32 0.0038 0.37 11.3 0.5 1 23 592 615 592 615 0.96

9 32 0.12 11 6.6 1.9 1 23 628 650 628 650 0.97

10 32 3.2e-05 0.0031 17.8 1.1 3 23 699 720 698 720 0.96

11 32 8.2 8e+02 0.8 0.2 1 21 754 774 754 777 0.69

12 32 0.0041 0.41 11.2 1.2 2 23 784 807 783 807 0.93

13 32 2.4 2.4e+02 2.5 0.0 2 23 816 838 816 838 0.84

14 32 0.23 23 5.7 0.0 2 23 845 867 844 867 0.94

15 32 1e-05 0.001 19.4 1.2 1 23 875 897 875 897 0.98

16 32 0.12 12 6.6 0.3 2 23 931 954 930 954 0.91

17 32 0.00016 0.016 15.6 3.3 1 23 957 980 957 980 0.97

18 32 0.00074 0.072 13.5 0.5 2 23 987 1009 986 1009 0.95

19 32 0.0012 0.12 12.8 5.2 1 21 1035 1055 1035 1056 0.95

20 32 0.0021 0.21 12.1 1.8 2 23 1070 1091 1069 1092 0.93

21 32 0.28 27 5.4 1.1 1 23 1095 1118 1095 1118 0.94

22 32 0.011 1.1 9.8 1.7 2 23 1125 1148 1124 1148 0.91

23 32 0.75 74 4.1 0.2 2 23 1155 1177 1155 1177 0.95

24 32 4.1 4e+02 1.8 0.0 2 23 1184 1206 1183 1206 0.91

25 32 0.18 17 6.0 2.7 2 23 1215 1237 1215 1237 0.96

26 32 1.8 1.7e+02 2.9 1.7 2 23 1243 1265 1243 1265 0.92

27 32 0.15 15 6.3 0.0 1 23 1325 1348 1325 1348 0.94

28 32 0.0025 0.25 11.9 2.8 1 20 1374 1393 1374 1395 0.95

29 32 0.39 38 5.0 1.3 2 23 1496 1518 1495 1518 0.94

30 32 0.67 66 4.2 0.8 2 23 1525 1547 1524 1547 0.95

31 32 0.54 53 4.5 2.5 1 23 1558 1580 1558 1580 0.97

32 32 0.1 10 6.8 0.1 3 20 1589 1606 1589 1608 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	4.9e-06	0.00048	20.4	1.0	1	23	217	239	217	239	0.98
2	32	0.0038	0.37	11.3	1.7	1	23	262	285	262	285	0.94
3	32	0.00047	0.046	14.1	0.8	2	23	292	314	291	314	0.96
4	32	0.00023	0.023	15.1	0.6	1	21	333	353	333	354	0.95
5	32	0.0044	0.43	11.1	0.1	3	23	447	467	445	467	0.95
6	32	0.00026	0.025	15.0	2.6	1	23	473	496	473	496	0.96
7	32	9.2e-05	0.0091	16.4	0.1	1	23	563	586	563	586	0.96
8	32	0.0038	0.37	11.3	0.5	1	23	592	615	592	615	0.96
9	32	0.12	11	6.6	1.9	1	23	628	650	628	650	0.97
10	32	3.2e-05	0.0031	17.8	1.1	3	23	699	720	698	720	0.96
11	32	8.2	8e+02	0.8	0.2	1	21	754	774	754	777	0.69
12	32	0.0041	0.41	11.2	1.2	2	23	784	807	783	807	0.93
13	32	2.4	2.4e+02	2.5	0.0	2	23	816	838	816	838	0.84
14	32	0.23	23	5.7	0.0	2	23	845	867	844	867	0.94
15	32	1e-05	0.001	19.4	1.2	1	23	875	897	875	897	0.98
16	32	0.12	12	6.6	0.3	2	23	931	954	930	954	0.91
17	32	0.00016	0.016	15.6	3.3	1	23	957	980	957	980	0.97
18	32	0.00074	0.072	13.5	0.5	2	23	987	1009	986	1009	0.95
19	32	0.0012	0.12	12.8	5.2	1	21	1035	1055	1035	1056	0.95
20	32	0.0021	0.21	12.1	1.8	2	23	1070	1091	1069	1092	0.93
21	32	0.28	27	5.4	1.1	1	23	1095	1118	1095	1118	0.94
22	32	0.011	1.1	9.8	1.7	2	23	1125	1148	1124	1148	0.91
23	32	0.75	74	4.1	0.2	2	23	1155	1177	1155	1177	0.95
24	32	4.1	4e+02	1.8	0.0	2	23	1184	1206	1183	1206	0.91
25	32	0.18	17	6.0	2.7	2	23	1215	1237	1215	1237	0.96
26	32	1.8	1.7e+02	2.9	1.7	2	23	1243	1265	1243	1265	0.92
27	32	0.15	15	6.3	0.0	1	23	1325	1348	1325	1348	0.94
28	32	0.0025	0.25	11.9	2.8	1	20	1374	1393	1374	1395	0.95
29	32	0.39	38	5.0	1.3	2	23	1496	1518	1495	1518	0.94
30	32	0.67	66	4.2	0.8	2	23	1525	1547	1524	1547	0.95
31	32	0.54	53	4.5	2.5	1	23	1558	1580	1558	1580	0.97
32	32	0.1	10	6.8	0.1	3	20	1589	1606	1589	1608	0.96

Sequence Information

Coding Sequence: ATGGAGTCGAGAGAACGTTACGACGAGCTGTGTCGCCTGTGTGCATCTTACGATGCGGTTAAAATGAATATATTTGGACAAGAAGGAAAAAACCGTCAGCTAGTTGATAAAATAGAGACTTGTCTACCATTCAAGATTGATGAAGATGACAGATTACCAAAATGTTTGTGTTACCGTTGTATGTACAATCTGGAAAATTTTTACGATTTTCGAACGGCTTGCGTCAATGCTGTCGCGCTGTTGGAAAGAAAATTACCTCCAAAAGAATCTTCAAACTGTGGATTACACAATGACATGGAAAAACATTCAGAGTTGCGCTCAGAGTTACTTAAGGAAAAAGAAAAGATGCCAATTCTTATACCTGAAGCACCGATAGTTAATCCGAATGCGGCGTTGGGTACTCCACCAAGATTAAATTCTGACGGTGAAGCCGATCAGGAAATTGAAGAAATTCTTGAACACAGTTTAGAAGATGGCGAGGACAGAAAATACGACGACGAGTACGAAATGGACATGGAGACAAACCCAAGTGATTTTTTGGAAATGCCTCCAATGGTAACAGAAGACCCAGAAGAAACGGACCCGCGGCAGCTGAACTCATCGCGCTCACCAGCGTTATTTCAACACAAATCGGAGCACCATGAAGTCTACGTATGTTCATTATGCAACAAAGCATTCAGTTCGAAAGGCCACCTATCACTGCACGCGCGAATTCACGCCGGAGCTGGGGACGTAGTGGGTGAAAAGGTAATCACAGACGACCACACATCCTTCAAGCGGCTATACCAATGTGACCTCTGCAACAAATCCTACTCAACAGCCAAGCACCGGTGGGGTCACGTGTCCTCAAACCACCGCGGACACCCAGCAGTAACATGTCAGTACTGCTCACGTTTGTACTCGACACGTGGAAATTTAATGGATCACATAAAGTCCCGACACACTGGGCAGCCTCCGCCCCCGAAACTCGGCGTCTACGTCCCCTCGGACAATCGATTCCAGTGTAACACGTGCCCGAAGATGTACACCAACATCACGGACTTGAACAAGCACAAAAAAGTCTGCACTGGCATCCGCGAATCAATAAGCTTGCTGTTGAAAAAGAAAGGCAAGAGTCTTATGGACACCTCAGAAGCTTCGAGCTTCGAGTCCGACGAGGACAGCAAAGACTACCGCACAGCCGAGGCTAAACTGTCAAAAAATCCCCAGCTGACTATTCTAAAGCAAGCTTTGACTCGCGGAGCCGAAGGACTTAAGCGCGACGACCGCGATCCTTATAAATCCCTACGCGTGCCTCAAGTTGACGCTCAAGTTGACCCAGAAGGCAAGAGATGGTTCTGCGAGACCTGTCCGCAGTCGTTTACTTCCATCGAAGCTTTAAAAGACCACGAGGTCACTCACGAGTCCGACAAACCCTTTGTCTGTCTTCTGTGCAAAAAACATTTTACACTCAAGTCGTCTCTCAGTCGGCATATCATCTCATCCCACGGCGTAGATCCAGCTCCGATGCTAGACGACGAAAAGTGTCTCAAAAAAAAATTCTCTGCTTCAAATGACAAGCACAGTAATCAATCTCGCGAGGAAGTTAAAATAAAACGCGAGCCTTCTTTTTCTCCAGAAGATATCAATGCTGATGACGAAGAAGAAGAAGCTCAGCAGCAAGATATGATTGAAATAGAAACAGTATTTGTATGTGAAATTTGCACTCGTGATTTTAACGACCGTGCTTCTTTGTGGCTTCACATACGCGCGACTCACAAAGAGTACGCAGCATTTGCCTGTGGTGTGTGTTTAAAAATCTGCACGGACAATGATCAATTGTTGAATCACGTAAATATGTACCACGGTGCTTCTAAGCTTCAGATATCCGAACAACGGCGCTACAGTTGTACCATTTGCGGCAGACAGCATGACTCACGTAAGAAATTAATGACCCACGTGTCAATTCACAATATAGATCCTTCCTACGACCCAGCTAACTTTGTCCAGCTAAACAGCGGGTATTACAGCAATGAAAATATAAATGACAGCACTCAAGATCACAGATTAAATCCAACGGTGGACTTTGACCACGAGGACGGTGAGAAGGTCGATTGTTTTATCTGCTACAAGTCTTTTCCAAATGAAGACCACCTGATCCGTCACCAGCGCAACGCGCATAAAGAGCAGACTCCTTTTGCAGCTGATCATCATCTTGTTGTCAATGCTGCCAGCAGTCCTGCGAATCCGAATGGGAACAAAGCGCAGTATCACTTATTTTTCGTGTGTGAAATTTGCGGAAGCTCCCACCCAAGCAAATGGGAACGCTGGTTACACGTCAGCAGTGTTCACAGCTCAGAAACGCAGATTAGGTGCGAGCGCGAGGACTGCGGTAAAATATTTTCTACCAAGTCGCTGAAAAATGAACATGCTCAGCATCATGTCTTGCAAGGCGCGTCGCCTAATACTTGTGAAATTTGCGGAAAACTTTGGGGCAGCCGAGTCGATTATTGGAAACACGTCATGGGTGTCCATTCCGACACTGTTCCTCTAATTTGCGGCGTTTGCTTGAAAGTATTCCCGGATGTTATTCAATTGAGCGGTCATGTTAAGAGCAAACACTGGCCGCTGACCAACGGGGACTTTAGTTGCGACATTTGCGGGCGTCCTTATTCAAATAAATCGAAAATGTCGAGACACCGTAAAATTCATGGTCTAGAAATTGAAAGTTACAGCAATGGCGTTAATGAGTCGGTGAATCAAGTAATACCAGCCAGTACGTATGAAACAAATACAGTTGAAGTTGATTTAACTTGTGAATTGTGCACGGACTTGATATTCCCCAGCTGGGAAGACTTGTGCCAGCACAGAAGAATAGTCCACGGATTATTCCCGTGTGATTTATGTAACAAATGCTACGGAAGGACTTCTCACTTGTGGAAGCACGTTAATCGAGTTCATAAAGGCCACAAGGACGTTACTTGTAAGTATTGTTTAAAAACGAGCGCTTCCAAGGATCATTTAGCGGCGCACATTGCTAAAATTCATCGCTACGAGCCAGAAAGCAAGAAAGTCCTCAAAGAAACTAATTATAAAGCTCCGGTTGTTGAAGAAGACACGATTCATCACTGTGAAAAGTGCAACAAAGCTTTCCACAAGAGATATTTATTGAAGAGACACATGAAAGGCTGTCAAAATTATCGGAAGGATCCGGGAGCGTTGTTGACCCGCTGCAGAGCTTGCGAGAGAATTTTTAAGGACCGGGCGAGCTTGCAGAAGCACATTGAGAATCATCACAGCAGCTACACGTGCCATTTGTGCAATGAGACGATTACTTCCAAGCTGGGAATTATGACACACAATCGTGTTAATCATATGAATCATCCGGACTTGACTTGTGATCATGCGAGTTGTAAAAAATTATTCCGGACTAAAGAAGATCTTGAAGCTCATCGTAAGGATCATAAATATCACTCTCCGAATGTTTGCGATTTTTGCGGAGATACTGTCGAGAATAAATTGAAATTAAAAATGCATATTTTGTCGCTGCATCGGAATGAAATTGGTGTGTCTTGTGGGGTTTGTTTGATACCGATGAAAGATCCGCAAGAATTGAAGAATCACGTGGAGAGTGTTCATCCAGGAGTTTTGTTAAAAGCAAATACTTGTCAGGTCTGCGGAAAACAATACGCTTCCAAGTGGAAGGCTTTTGATCACACGAAAAAATGCCACGGTAAAGTTTTTCGGACTTGCAAACAATGTCTTGCTGTTTTTACGACTGACGCTGATATTAGACATCACTACGAGCATGTTCATAATGTGCCTAAGGATCAGCTTGCGGGATTTGAAAATAATTCTGATGGTGGTGGTGGTAAAGGAGCCGGACATGATGATGGAATTAAAGAAGAGCCAGATGATCTTGATTTTGATGATAGTGTTTATGATGAATTACCCAGAGTTAATAAATCAACTAAACGTAAACCTCAAGACACTTATGACTGTGAAATATGCCCGGAAATATTTTTAAATTATGAAACTTTGGCTGATCATTATCAGCTTATTCACAATACCGATCCAGAAAGAATGTTTAAAAAAATGAAAACAAATAGCGGTAAAAGACGAATGCGTAATCGTGAAAATTTTGAATGTGAAAATTGTAAAAAACAATTTTGTACAAAAACATTATTTTGGAATCATATCAGTAATTGTACGCGTAAAAATAATTTATCAAAAAATAATAATGATAATACTACTACAACTACCTCGATACTTGAAACGCATTTAAAAAATAATAATATGATTAAAAAGGAGCCTGTTGATATTATAAATGAGTCTAATTTAAATATACCTGATTTTAATTTATTTGAAGATATTAATTTGCAGTTATCTGGACACAAACCAGTGCCAAATTTAATGCCACTGTCTTCATCACACCGAATGTCCCCGATGAAATGCAACCGCAAGGATTCTAGAAAAGTTTATGACGAGTCGACAAATACAGTGTGCGCTTGCGAAGTTTGTGGGAAGCAGTGGCCAGCTAAGAAGCACCTCTGGCAGCATTTGATCAGATTTCATAGAGCTGAGGCGGCTGTTACTTGCGGAGTATGCTTGAAATTGTGCACGACCTACCGCGGATTGTCGCAGCATCTTAAGGAGGCTCATGAAGCTATTTTGTCTTGTGAGGGGAATAATTTTACTTGCAAGACTTGCGGGAGGTATCACAATGCTCGGAGTAAGCTGTTGCTTCATATGAGCATTCATATTAATAATAATGAGCACATATGGTGCTCTAAATGTGCGCTTAGTTTTGATAGCGAGGAGAAACTTGAAGCTCATATGGCTAATTGTGTTGTTAATAAGCAAAGGAGGGACGAAGATGGCAATGATAATGATAATGACAATGACAATGACAATGATAATGATCATAATAATGATAATGATGATGATGATGAAGAAAATGAAGATAATGAAGATGTCAAGATTGATGATGATAAAGGAAGTTTGATTGGCGATGAAGCTTCTTTGCTTGGTGAGGGTGATGAAGAAGAAGAACAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGGAGAGGGAGATAATGGTGAGGTTGATGTTGATGATAATGAAGAAGATAATGAGGTTGAGGGTGAAGAAGGTGAAGAGGGAGAAGAAGAAGCAGAAGGTGACTTTGACTCTGAAGACCTGGTCAATGGTGAACACAGTGAAGAGTCTGCTTGTGAATCTGACAGTGAAAATGAACACGAGAATGAAACTATTGAGAGAGAGGACAACTCCAATAGCAACTCCAACAGCAACAGCAACAACGACAGCGATGACTCGGATGAAGAAGAAAAAAAGGAGAGAGAAAATGTCAGAGACAATGACACTGATGATGATGGACCCCCGGTTCTTAGTCCGATAATGCCGATTCATGAGAACAAGTCTCGCAGGGTGAAATCTAAAAAAAACATTCCTGAGCTGGATGATAAGGAGTTATTGGAGAGCAACTCTGGATACTATGGCTCGGAGGTTGATGATGAAAGAGGGCTGAATGAAAATACTTTGGATTCTATGGCTGAGAATGATGGAGAGTTTGAGGAGCAAATTAGGATTAATGACACTGTTCTGATGGTCACCAATGATGATGAGGGAAATGAAATTGTCATTGAACAGAATGTGGAAGAAATTAATGAAAATGACGATGGCGAGTCGATTCAAGACGTAGCGGATTTTATTTATCAAGTCGATCCGGATAATTATGATGGAGATAGCCAGGAGGTTCAGGAGGAAGAGGAAGAGGATCATGATGTTAATGATGATCAAGAGGCTAATTCTAGTGCCAAAAAACGTGTCTCGAGGACGTAG
Protein Sequence: MESRERYDELCRLCASYDAVKMNIFGQEGKNRQLVDKIETCLPFKIDEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERKLPPKESSNCGLHNDMEKHSELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADQEIEEILEHSLEDGEDRKYDDEYEMDMETNPSDFLEMPPMVTEDPEETDPRQLNSSRSPALFQHKSEHHEVYVCSLCNKAFSSKGHLSLHARIHAGAGDVVGEKVITDDHTSFKRLYQCDLCNKSYSTAKHRWGHVSSNHRGHPAVTCQYCSRLYSTRGNLMDHIKSRHTGQPPPPKLGVYVPSDNRFQCNTCPKMYTNITDLNKHKKVCTGIRESISLLLKKKGKSLMDTSEASSFESDEDSKDYRTAEAKLSKNPQLTILKQALTRGAEGLKRDDRDPYKSLRVPQVDAQVDPEGKRWFCETCPQSFTSIEALKDHEVTHESDKPFVCLLCKKHFTLKSSLSRHIISSHGVDPAPMLDDEKCLKKKFSASNDKHSNQSREEVKIKREPSFSPEDINADDEEEEAQQQDMIEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICTDNDQLLNHVNMYHGASKLQISEQRRYSCTICGRQHDSRKKLMTHVSIHNIDPSYDPANFVQLNSGYYSNENINDSTQDHRLNPTVDFDHEDGEKVDCFICYKSFPNEDHLIRHQRNAHKEQTPFAADHHLVVNAASSPANPNGNKAQYHLFFVCEICGSSHPSKWERWLHVSSVHSSETQIRCEREDCGKIFSTKSLKNEHAQHHVLQGASPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVIQLSGHVKSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLEIESYSNGVNESVNQVIPASTYETNTVEVDLTCELCTDLIFPSWEDLCQHRRIVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCKYCLKTSASKDHLAAHIAKIHRYEPESKKVLKETNYKAPVVEEDTIHHCEKCNKAFHKRYLLKRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMTHNRVNHMNHPDLTCDHASCKKLFRTKEDLEAHRKDHKYHSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPQELKNHVESVHPGVLLKANTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDADIRHHYEHVHNVPKDQLAGFENNSDGGGGKGAGHDDGIKEEPDDLDFDDSVYDELPRVNKSTKRKPQDTYDCEICPEIFLNYETLADHYQLIHNTDPERMFKKMKTNSGKRRMRNRENFECENCKKQFCTKTLFWNHISNCTRKNNLSKNNNDNTTTTTSILETHLKNNNMIKKEPVDIINESNLNIPDFNLFEDINLQLSGHKPVPNLMPLSSSHRMSPMKCNRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYRGLSQHLKEAHEAILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINNNEHIWCSKCALSFDSEEKLEAHMANCVVNKQRRDEDGNDNDNDNDNDNDNDHNNDNDDDDEENEDNEDVKIDDDKGSLIGDEASLLGEGDEEEEQEEEEEEEEEGEGDNGEVDVDDNEEDNEVEGEEGEEGEEEAEGDFDSEDLVNGEHSEESACESDSENEHENETIEREDNSNSNSNSNSNNDSDDSDEEEKKERENVRDNDTDDDGPPVLSPIMPIHENKSRRVKSKKNIPELDDKELLESNSGYYGSEVDDERGLNENTLDSMAENDGEFEEQIRINDTVLMVTNDDEGNEIVIEQNVEEINENDDGESIQDVADFIYQVDPDNYDGDSQEVQEEEEEDHDVNDDQEANSSAKKRVSRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01006486;
90% Identity: iTF_00380541;
80% Identity: -