Mdem009466.1
Basic Information
- Insect
- Microplitis demolitor
- Gene Symbol
- -
- Assembly
- GCA_000572035.2
- Location
- NW:2258047-2269057[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 4.5e-06 0.00032 20.3 1.0 1 23 222 244 222 244 0.98 2 32 0.0035 0.25 11.2 1.7 1 23 267 290 267 290 0.94 3 32 0.0017 0.12 12.3 0.5 2 23 297 319 296 319 0.96 4 32 0.00022 0.015 15.1 0.6 1 21 338 358 338 359 0.95 5 32 0.0087 0.62 10.0 0.1 3 23 451 471 449 471 0.93 6 32 0.00064 0.046 13.6 1.9 1 23 477 500 477 500 0.93 7 32 8.6e-05 0.0061 16.3 0.1 1 23 581 604 581 604 0.96 8 32 0.0035 0.25 11.2 0.5 1 23 610 633 610 633 0.96 9 32 0.11 7.7 6.6 1.9 1 23 646 668 646 668 0.97 10 32 3e-05 0.0021 17.8 1.1 3 23 721 742 720 742 0.96 11 32 7.6 5.4e+02 0.7 0.2 1 21 778 798 778 801 0.69 12 32 0.69 49 4.0 1.2 2 23 808 831 807 831 0.91 13 32 2.3 1.6e+02 2.4 0.0 2 23 840 862 840 862 0.84 14 32 0.017 1.2 9.1 0.0 2 23 869 891 868 891 0.95 15 32 9.4e-06 0.00067 19.3 1.2 1 23 899 921 899 921 0.98 16 32 0.43 30 4.7 1.5 2 23 972 995 971 995 0.88 17 32 0.00015 0.011 15.5 3.3 1 23 998 1021 998 1021 0.97 18 32 0.00034 0.024 14.4 0.8 2 23 1028 1050 1027 1050 0.95 19 32 0.0012 0.082 12.8 5.2 1 21 1076 1096 1076 1097 0.95 20 32 0.002 0.14 12.0 1.8 2 23 1111 1132 1110 1133 0.93 21 32 0.26 19 5.4 1.1 1 23 1136 1159 1136 1159 0.94 22 32 0.0055 0.39 10.6 1.8 2 23 1166 1189 1165 1189 0.94 23 32 0.7 50 4.0 0.2 2 23 1196 1218 1196 1218 0.95 24 32 3.8 2.7e+02 1.7 0.0 2 23 1225 1247 1224 1247 0.91 25 32 0.16 12 6.0 2.7 2 23 1256 1278 1256 1278 0.96 26 32 2.7 1.9e+02 2.2 0.6 2 23 1284 1306 1284 1306 0.90 27 32 0.088 6.3 6.8 0.0 1 23 1364 1387 1364 1387 0.94 28 32 0.0023 0.17 11.8 2.8 1 20 1414 1433 1414 1435 0.95 29 32 0.36 26 4.9 1.3 2 23 1537 1559 1536 1559 0.94 30 32 0.62 44 4.2 0.8 2 23 1566 1588 1565 1588 0.95 31 32 0.5 36 4.5 2.5 1 23 1599 1621 1599 1621 0.97 32 32 0.019 1.3 9.0 0.1 3 20 1630 1647 1630 1649 0.97
Sequence Information
- Coding Sequence
- ATGGAGTCGAGAGAACGTTACGACGAGTTGTGTCGCCTGTGTGCATCTTACGATGCGGTTAAAATGGATATATTCGGACAAGAAGGAAAAAATCGTCAGCTAGTTGATAAAATACAGACTTGTCTACCATTCAagattGCTGAAGATGATAGATTACCAAAATGTTTATGTTACCGTTGTATGTataatcttgaaaatttttatgattttcgaACGGCTTGTGTTAATGCCGTTGCGTTGCTTGAAAGAAAATTACCACTAAAAGAATCgtcaaACGATGGATTGCATAATGATATGGAAAACCATTCGGAATTACGTTCAGAATTACTTAAGGAGAAGGAAAAAATGCCAATTCTTATACCTGAAGCTCCGATAGTTAATCCAAATGCCGCGCTGGGCACTCCACCGAGATTAAATTCTGATGGGGAAGCTGATCAGGAGATTGAAGAAATTCTTGAACACAGTGGTACTGAAGaaggGTTAGAGGATGGCGAGGACAGAAAATACGATGACGAATATGAAATGGACATGGAGACTAATCCTAGTGATTTTTTGGAAATGCCGCCAATGGTAACAGAGGACACGGAAGAAAACGACGGCAGCCAATTAAATTCAGTTCGTTCTCCAGCTCTATTTCAACACAAATCCGAGCACCATGAAGTTTATGTCTGCTCGTTGTGTAACAAAGCATTCAGCTCTAAAGGACACTTGTCATTGCACGCGCGAATTCATGCAGGTGCTGGCGATGTCGTGGGTGAAAAAGTTATTACCGACGATCACACATCCTTCAAACGTTTGTACCAATGTGACCTCTGCAACAAATCTTACTCGACAGCTAAACACCGTTGGGGTCACGTGTCCTCAAATCATCGCGGACATCCAGCAGTTACGTGTCAATACTGCGCACGTTTATACTCGACACGTGGTAATCTCATGGATCACATTAAATCACGGCACACTGGACAACCTCCACCTCCAAAACTCGGTGTCTATGTGCCAACGGATAACCGTTTTCAATGTAATACCTGTCCTAAGATGTACACCAACATCACGGACttgaataaacataaaaaagtttgtacaGGTACTAGGGAATCGTTAAGTCAGCAGCTAAAGAAGAGGGGAAAGAGTTTGATGGATACATCAGAAGCATCAAGCTTTGAATCAGATGAAGACAGCAAAGATTATCGTACAGCAGAAGCTAAACTGTCAAAAAATCCTCAGCTCACTATTTTAAAACAAGCACTGACCCGCGGTGTCGAAGTATTGAAACGCGATGACCGGGACCCCTACAAGTCATTGCGTGTACCTCAGATTGATCATGCTGATGCCGAAGGCAAAAGATGGTTTTGTGAAACCTGCCCACAGTCATTCACTTCCATCGAAGCTCTGAAAGATCACGAGGTAGTGCATGAATCTGATAAACCATTCATTTGTCTTCTatgtaaaaaacatttcaCTTTAAAATCATCACTGAGTCGGCATATCATTGCGACACATGGTGTCGATCCAGGTCCAATGATCGACGACGACAAGTGCTACAAAAGGAAATCATTTTCATCGTCAACGGTATTGTCAATTATAAACGACAAGCAACAGCATCACTCAACACGtggtgatttaaaaataaaacgtgaACCTTCTGAATTATCATTTTCACCAGAACCACGAACCAACGCCGACGACGAAGAGGATCCTGACAATAATCAACAGCACGATATGATTGAAATAGAAACTGTATTTGTATGTGAAATATGTACTCGTGACTTTAATGATCGCGCTTCACTGTGGCTCCATATACGAGCAACGCACAAAGAGTACGCGGCATTTGCGTGCGGtgtatgtttaaaaatatgtacagaCAATGATCAATTGTTGAATCACGTAAATATGTATCACGGGGCTTCGAAATTACAGATATCTGAACAACGACGGTACAGTTGTACAATTTGCGGTAGACAACATGACtcacgtaaaaaattaatgacacaTGTGTCAATACACAACATTGATCCTTCATACGATCCAGCAAATTTTGTCCAGTTAAATAGCGGCTATTACAGCAacgaaaacataaatataaacaacgATGGCCATAATAATCAAGATTTTTCAACATCGGCAATTGACTTTGATCACGAGGACGGTGAAAAAGTTGACtgttttatttgttacaaATCATTTCCTAATGAAGATCACTTGATACGTCATCAACGTAACGCTCACAAGTCTGATCATATGACGACACACGCGGCAGATCATCATCTTGTTGCTGCAAATACAAATGGACCAGCAAATCCGAATGGCAATAAAGCGcagtatcatttattttttgtttgcgaAATTTGTGGGAGCTCACATCCAAGCAAATGGGAACGTTGGTTACATGTAAGCAGTGTTCACAGCACAGAGACACAGATACGATGCGAGCGTGAGGATTGTGCTAAAATATTTGCAACAAAgtcattgaaaaatgaacaCAATCAGCATCACGTGCTCCAAGGCGCGTCACCCAATACCTGTGAAATTTGTGGTAAATTGTGGGGTAGCCGTGTTGATTATTGGAAACACGTCATGGGCGTTCATTCAGACACAGTACCGTTGATTTGTGGTGTCTGTTTGAAAGTATTTCCCGATGTTGTTCAACTTAGCGCTCACGTTAAAAGTAAACACTGGCCATTGACCAACGGTGACTTTAGTTGTGATATTTGTGGACGTccttattcaaataaatcaaaaatgtcACGGCATAGAAAAATACATGGGTTAGAATTAGAGAGCTACAGCAATGGTATCAACGATACAATTAATGATTCCGCTGGTGCTGGTCCTGGTCCTAATGCTAGTGCTGGTGCTGTGTCTACTGCTGCTGTTAATAATTACGAAACAAACGCTACCACAGAAGTGGATTTGACTTGTGAGATGTGTACAGATTTGTTATTCCCAAGCTGGGAAGATTTGTGTCATCATAGACGAATGATTCACGGTCTATTTCCATGTGATTTGTGTAACAAATGTTATGGACGCACATCCCACTTGTGGAAACACGTCAATCGGGTTCACAAAGGCCACAAAGACGTTACCTGCAAGTACTGCTTGAAGACTAGCGCTTCCAAGGATCATTTGACTGCTCACATTGCCAAAATTCACCGGTACGAGCCAGAAACAAAGCAGATACTTAAAGACGCAAACTATAAAACCCAGTCGGTGGAAGAGGATACGATTCATCACTGcgaaaaatgtaataaagcATTCCACAAACGTTATTTGTTGAAGAGACACATGAAAGGCTGCCAGAATTATCGTAAAGATCCGGGAGCTCTGCTAACGCGATGCCGTGCCTgcgaaagaatttttaaagacCGCGCCAGTTTACAGAAACACATTGAAAATCATCACAGCAGCTACACGTGCCATTTGTGCAATGAAACAATAACTTCGAAACTCGGTATCATGACCCACAATCGTGTCAATCATATGAATCATCCAGATCTTACTTGTGATCACgcaaactgtaaaaaattattccggACTAAAGAAGATCTTGAAGTGCATCGTAAAGATCACAAATATCATTCACCAAATGTATGTGATTTTTGTGGTGATACtgtggaaaataaattgaaattaaaaatgcatattttGTCACTGCATCGAAATGAAATTGGTGTGTCCTGTGGTGTCTGTTTGATACCAATGAAAGATCCTCAGGAGTTAAAAAATCATGTTGAAAGTGTTCATCCAGGTGTATTATTAAAACCAAACACTTGTCAGGTATGTGGTAAGCAGTACGCATCAAAGTGGAAGGCTTTTGATCACACGAAAAAATGTCACGGTAAAGTTTTCCGTACATGCAAACAGTGTCTTGCTGTTTTTACGACAGACGCTGACATTAGATACCACTACGAGCATATTCATAATGTACCGAAAGATCAGTTGGCGggctttgaaaataatttagacgCCGGAGGCAAAGGCGCCGGTAATGATGACGGGATTAAAGAAGAGCCAGATGATTTGGAGTATGATGATGGCGTTTATGATGATATACCACGGGTTAAATCATCAAAACGAAAGCCACATGACACTTATGACTGTGAAATATGTCccgagatatttttaaattacgataCACTTGCTGATCACTATCAGCTGATACACAATACTGATCCGGAgagaatgtttaaaaaaatgaagaccAATAGTGGGGGTAAAAGACGAATGCGTAatcgtgaaaattttgaatgtgaaaattgtaaaaaacaattttgtacaaaaacattattttggAATCATATCAGTAATTGTacacgtaaaaataattatatgtcacgtaataataatgataataatacaaCATCTACCTCGATACTTGAaacgcatttaaaaaataataatcttattaAAAAGGAACCTAATGATGTATTGAatgaatcaaatttaaatatacctgatttcaatttatttgaagatattaatttacagTTGTCTGGACATAAACCAGTGCCAAATTTAATGCCACTGTCTTCATCTCACAGAATGTCACCGATGAAATGCAATCGCAAGGACTCACGTAAAGTTTATGATGAATCGACCAATACTGTGTGCGCTTGTGAGGTCTGCGGTAAACAGTGGCCAGCTAAGAAACATCTATGGCAGCATTTGATAAGATTTCATCGAGCAGAAGCGGCTGTTACCTGCGGCGTATGTTTGAAACTGTGCACAACTTACCGCGGACTGTCCCAACACTTGAAGGAAGCTCATGAGGCTATTTTGTCGTGCGAGGGAAATAATTTCACCTGCAAAACTTGCGGTAGGTATCACAATGCACGCAGTAAATTATTGCTACACATGAGTAttcatatcaataataatgagCACATTTGGTGCTCAAAGTGCGCGGTTAGTTTTGAAACTCAGGAAAAACTCAAAGCGCATATGGTTAATTGTGCTGTTAATAAACAGAGACGTGATGAAGATGAAgacaatgataatgataacgaCAATGATCATGACAATGACAATGATGATGagcatgataatgataatgatcatGATCAAGATGATGAACATGAGGAGAATAGTGTTGATGAAGAAGATGTTAAGATGGACACTGAAGACAAAGGCAGTTTGATTGGTGATGGTGCTTCTTTATTGggtgaagatgatgatgatgatgagggtGAAGGTGAAGGTGAAGAAGAAGCAGAAgcagaggaagaagaagaagatgctgaagaagaagaagaaattgaAGTTGAAGGTGAAGGTGAGGAAGGTGAAGAAGGTGGTTTTGATTCTGAAGGTTTAGTTAATGGTGAGCATACTGAAGAATCTGCTTGTGAGAGTGATAGTGAGGAGCATGatcatgataatgataatgaaaatgaaacgATTGACAAAGAAGATAATTCTGACAGTGAAGAACATGATGAATCAGATGTTGAAAAGGATGAAGAAGATAAAGAATCTAAAGAACCAGAAGATGTAAGAGATAATGATACAGATGATGACGGACCACCTGTACTAAGTCCGATGATGCCGATTCACGAGGACGATGATAAAGTTGAAGAATTGAAAACTAAAGAAGATATTCCTGAGTTGGATGGAATTGATAAGGAATTATTGGAAGGCAATTCTGGTTACTATGATGAGTTTAAAGATGAGTCGGAGGCAGATGACGACAGACTGCTGATTGAGCAGAATACCTCGGACTCTATAATCGCTGAAACAGATGCTGAGGCTGGTGAGGATGCTGATGGGTACGAAGAACAAGAAATGCAGATTAATGATCTGGATGGTACTGTTCTGATGGTTACCAACGACGCTGACGGTAATCAGATACTGGTACAGCAGAATGtcgaagaaataaatgaagacGACGACGGTGAGTCGATACAAGACGTCGCTGATTTTATTTACCAAGTTGATAATGATAACTATGACGGCGATGCCCAGATGGAGATCCAAGAGGTGCAGGACGAAGAAGATGATGGTGAGGAACATGAAGATATTGATGAGGCTAATTCTAGTGCCAAAAAACGTGTCTCGAGGACGTAg
- Protein Sequence
- MESRERYDELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERKLPLKESSNDGLHNDMENHSELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADQEIEEILEHSGTEEGLEDGEDRKYDDEYEMDMETNPSDFLEMPPMVTEDTEENDGSQLNSVRSPALFQHKSEHHEVYVCSLCNKAFSSKGHLSLHARIHAGAGDVVGEKVITDDHTSFKRLYQCDLCNKSYSTAKHRWGHVSSNHRGHPAVTCQYCARLYSTRGNLMDHIKSRHTGQPPPPKLGVYVPTDNRFQCNTCPKMYTNITDLNKHKKVCTGTRESLSQQLKKRGKSLMDTSEASSFESDEDSKDYRTAEAKLSKNPQLTILKQALTRGVEVLKRDDRDPYKSLRVPQIDHADAEGKRWFCETCPQSFTSIEALKDHEVVHESDKPFICLLCKKHFTLKSSLSRHIIATHGVDPGPMIDDDKCYKRKSFSSSTVLSIINDKQQHHSTRGDLKIKREPSELSFSPEPRTNADDEEDPDNNQQHDMIEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICTDNDQLLNHVNMYHGASKLQISEQRRYSCTICGRQHDSRKKLMTHVSIHNIDPSYDPANFVQLNSGYYSNENININNDGHNNQDFSTSAIDFDHEDGEKVDCFICYKSFPNEDHLIRHQRNAHKSDHMTTHAADHHLVAANTNGPANPNGNKAQYHLFFVCEICGSSHPSKWERWLHVSSVHSTETQIRCEREDCAKIFATKSLKNEHNQHHVLQGASPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVVQLSAHVKSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLELESYSNGINDTINDSAGAGPGPNASAGAVSTAAVNNYETNATTEVDLTCEMCTDLLFPSWEDLCHHRRMIHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCKYCLKTSASKDHLTAHIAKIHRYEPETKQILKDANYKTQSVEEDTIHHCEKCNKAFHKRYLLKRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMTHNRVNHMNHPDLTCDHANCKKLFRTKEDLEVHRKDHKYHSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPQELKNHVESVHPGVLLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDADIRYHYEHIHNVPKDQLAGFENNLDAGGKGAGNDDGIKEEPDDLEYDDGVYDDIPRVKSSKRKPHDTYDCEICPEIFLNYDTLADHYQLIHNTDPERMFKKMKTNSGGKRRMRNRENFECENCKKQFCTKTLFWNHISNCTRKNNYMSRNNNDNNTTSTSILETHLKNNNLIKKEPNDVLNESNLNIPDFNLFEDINLQLSGHKPVPNLMPLSSSHRMSPMKCNRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYRGLSQHLKEAHEAILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINNNEHIWCSKCAVSFETQEKLKAHMVNCAVNKQRRDEDEDNDNDNDNDHDNDNDDEHDNDNDHDQDDEHEENSVDEEDVKMDTEDKGSLIGDGASLLGEDDDDDEGEGEGEEEAEAEEEEEDAEEEEEIEVEGEGEEGEEGGFDSEGLVNGEHTEESACESDSEEHDHDNDNENETIDKEDNSDSEEHDESDVEKDEEDKESKEPEDVRDNDTDDDGPPVLSPMMPIHEDDDKVEELKTKEDIPELDGIDKELLEGNSGYYDEFKDESEADDDRLLIEQNTSDSIIAETDAEAGEDADGYEEQEMQINDLDGTVLMVTNDADGNQILVQQNVEEINEDDDGESIQDVADFIYQVDNDNYDGDAQMEIQEVQDEEDDGEEHEDIDEANSSAKKRVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01006486;
- 90% Identity
- iTF_01004521;
- 80% Identity
- -