Basic Information

Insect: Melipona bicolor
Gene Symbol: stc
Assembly: GCA_030673865.1
Location: JAHYIQ010000011.1:360591-365615[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3 2.7e+04 -4.4 1.6 15 19 606 610 605 610 0.81

2 15 0.13 1.2e+03 0.2 0.4 4 10 639 645 638 645 0.95

3 15 4.1e-05 0.36 11.4 14.9 4 19 656 671 654 671 0.93

4 15 1e-07 0.00091 19.8 13.1 1 18 707 724 707 725 0.97

5 15 0.41 3.7e+03 -1.4 1.7 7 13 729 735 729 736 0.84

6 15 1.9e-08 0.00017 22.1 11.5 1 19 763 781 763 781 0.98

7 15 4.7e-06 0.042 14.4 11.9 4 18 828 842 821 843 0.88

8 15 2.5 2.2e+04 -3.9 2.0 5 10 871 876 871 876 0.93

9 15 0.012 1.1e+02 3.6 9.1 1 11 882 892 882 893 0.96

10 15 1.5 1.3e+04 -3.2 0.5 4 10 897 903 896 903 0.88

11 15 6.1e-09 5.5e-05 23.7 13.9 1 19 909 927 909 927 0.98

12 15 0.96 8.6e+03 -2.5 0.7 5 10 955 960 955 961 0.88

13 15 3 2.7e+04 -5.9 10.1 10 19 974 984 966 984 0.75

14 15 8.1e-07 0.0072 16.9 13.6 1 16 1020 1035 1020 1046 0.85

15 15 1.3e-05 0.11 13.1 13.6 1 19 1052 1071 1052 1071 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3	2.7e+04	-4.4	1.6	15	19	606	610	605	610	0.81
2	15	0.13	1.2e+03	0.2	0.4	4	10	639	645	638	645	0.95
3	15	4.1e-05	0.36	11.4	14.9	4	19	656	671	654	671	0.93
4	15	1e-07	0.00091	19.8	13.1	1	18	707	724	707	725	0.97
5	15	0.41	3.7e+03	-1.4	1.7	7	13	729	735	729	736	0.84
6	15	1.9e-08	0.00017	22.1	11.5	1	19	763	781	763	781	0.98
7	15	4.7e-06	0.042	14.4	11.9	4	18	828	842	821	843	0.88
8	15	2.5	2.2e+04	-3.9	2.0	5	10	871	876	871	876	0.93
9	15	0.012	1.1e+02	3.6	9.1	1	11	882	892	882	893	0.96
10	15	1.5	1.3e+04	-3.2	0.5	4	10	897	903	896	903	0.88
11	15	6.1e-09	5.5e-05	23.7	13.9	1	19	909	927	909	927	0.98
12	15	0.96	8.6e+03	-2.5	0.7	5	10	955	960	955	961	0.88
13	15	3	2.7e+04	-5.9	10.1	10	19	974	984	966	984	0.75
14	15	8.1e-07	0.0072	16.9	13.6	1	16	1020	1035	1020	1046	0.85
15	15	1.3e-05	0.11	13.1	13.6	1	19	1052	1071	1052	1071	0.97

Sequence Information

Coding Sequence: ATGGCCACATGGGACGGTTCTTATTTGGGACCGGATGACGAAGACTATTATCAAATGTATGCTGATCAGAATACACCCGGGCCTGCGTCAGGAAATTGGGCATTATTCTCTGATAATATGAGTCATGATTATTTACAACCTAAACGCGAGTTTTATGTACAAAATGAACGCATGTTTGAACAGAATAGACCAAATACCTTCTATCATTCGAATGTGAATGTTATGCCAAACTTGATGGCCACCACTAGTTATGAGTATGTAACGAATCCAATGAATACGCATGCACTGAACAGTCAGGAGTATTATTCGCATGTTGTCAAACCTGAACAATGTTATTTGTCTGATGCCCCTTGTAATTGCGATAATAACTTAACTAACAACAGAACCAAGTATGATCGTATGAAAAGAATCGAAGAACCTTCGAGTAGTATAATGAGTCACTCAAAATTACATGTTATGGCCGAGGAGTTTGTGCCAAATAATAGAGAATACAATGATAGAAGCAAAAATGAGTCGCagaatgtaaaatgtattaaCAATGTATTAACAAATTCTTGTGTCCAAGATAGTAACAAGACAATATcaggtaaatatttttcttgcaaCATGAGTAGGCATGATAAAAAGTACAATAGCAAAAAGAGTCCCAATGGTAAGCACAAAGAAAGACAGTGTTACAAAGAAGACCAATGTTACAAGAAGTACGCATATGCAAATTACTATCAGCAACATGTCAGAGCTCATAAACTTCAAGGAAATAAGTACTTTATTAATAAGCATTATTCAGAAAACTCGCAAGTAAGTTCAGAGTGTGCAAATGAGAATGCATCTGATGAACGTCCAATGAATAATGATGTTGCTTGCAGTAGTAAAGAGAATTGTGCAACAAATTCGAATAAAGGAGAATCatcttcaaatataaaaataagttcaaatagacataaaaatttatcaaataagaataataatgaaagaattattattgatgATAACAACGTACAGGATAACAACGTACAGGATAACAACGTACAGGATAACAACGTACAGGATAACAACGTACAGAATAACAATGTACAGGATGACAACATACAAGATAACGTACAGGATAATAACATACAGGATAGTAATGTACAGGAATCCAATAATCTAGTTAAAGAATTTACTTACTATAACTCTGGATTAAAACAGACCTACAATAATCATAGAAATGCAAGGAGATATGAGTACAGTGATAGATATAGTAGAGAAGGAAACTTTAAAGAAAGGCGACATCATTATCAGAGATATGGCAGAGAGAATTATGGTAAAGAAGATAGATTTAGAGCGAAAGATCAAACGTGCAGTAATGAAGAATGTAATGAATACAAAGATAAATGTTTCAACGTGGAAACTGGGTCAGATGCAAAACAAGCAATAGAGAAAAGGCATAATTATCGGCGATATAAAGCATTTAAGGAACATTACAAaggtaattttgaaaataaagtggtaattttgaaagagaaagataaaggaaaatatacatctgaaaataaagaaaaggaGAATGAACATTGGAGAAGTAGaaggaaaattaatgaaagaaataatattccaaaacggggacaaaataaaaaatcactcGTTGATAGCGATGCAAGTCAGAGAGAAAGACTAGCAGAACAACTGAATAAGGGAGAATTGGAATGCTTAGTGTGTTGTGAATACATTAAGCAGAATGATTATACTTGGTCATGCTCCAATTGCTATCAcgtgtttcatttaaaatgtattaaaaaatgggTAAACTCATCACAAGATGATAATGGTTGGAGATGTCCGGCATGTCAAAATGTTAGCTCAATAATTCCCGAGGATTACTTTTGCTTTTGTGGAAAAGTGAGAGCACCTGAATGGAATCGTAGAGATATTGCACATTCTTGCGGCGAAGTTTGTGGTAGAACTCTATCGAAAAATGATTGTCCACATAAATGCACTCTTTTGTGTCATCCAGGATCTTGTCCACAATGTACAGCAATGGTGACAAAGTATTGTGGCTGTGGTAGAACTCTACAAACAGTACAATGTAAAACTCATAAATTATTGAAGTGTGATTCTATATGTGGTAAAGATTTAAATTGTGGTAGACACAAATGTCAAAGTAAATGCCATTATGGAGAAtgtgaaaaatgtgaaaaaacaGTAGAGCAAgtatgTCATTGTGGGAAATTCTCACATGTATTAATGTGTGAAAGTTATATTCCACCTGCATGTGCTTGTGAGGTCATTTGTGAGAAATTGTTGGAATGTGGTAATCacatttgtacaaaattatgtCATCCAGGGGCTTGCGAATCTTGCTCTTTGACCCCTGGGAAAATTACAACCTGTTGCTGTGGACAAACACCATTACCAGATAAAAGACAAACTTGTTTAGATCCAATTCCTGTCTGTGACCAAAtatgttcaaaaaatttaaattgtggACCACCTGATGACCCTCATAAGTGTAAAGTAAAATGTCACGTAGGAGATTGTCCTGTTTGCGATTTAACCACCATTGTTAAGTGTCGTTGTGGAAACATGGAGAAAGAAATAGCTTGTAAACGTTTGGTATCAAAAACTGATGTACGATGTGAAAAGAAATGTTCAAAGAAAAAATCCTGCGGCAAACACAAATGTAATAAACGATGTTGTATAGAAACAGAACATATTTGTCCAGCAATCTGTCCAAAAACGCTAAGCTGTGGAAAGCATCAATGCGAACGAAATTGTCATAAAGGAAGATGTCAACCTTGTTGGCGAACTAGTTTTTACGAATTACGCTGCGAATGCGGAGCTTCTGTGGTGTATCCTCCTGTTCCTTGTGGAGCAAGAAGACCTACGTGTGACAAACCGTGCTCTCGTCAGCATCCTTGTGGCCACGAAGTATTGCATAATTGCCATAGTGAACCAAATTGTCCACCTTGCACTGTCCTTACTCAAAGATGGTGTCACGGCAAGCACGAGTTACGTAAAGCTGTACCATGTTATGTTGACGAAATTTCATGTGGCTTACCATGTAACAAGCCCATATCTTGCGGTCGACATAAATGTATTACTACTTGTCATTCCGGACCATGTGAAAAACCGGGCCAACAGTGTACTCAACCTTGCACCGTTCAAAGAGAAATGTGTGGACATATCTGTGCTGCCCCGTGCCACGAGGGTAAATGTCCAGATACACCTTGCAAGGAAATGGTTAAGGTAACGTGTCAATGCGGGCATAGGACCATGTCACGTGTTTGTgccgaaaattcgaaagaatatCAAAGAATAGCAAGTAGTATATTAGCCAGTAAAATGGCTGATATGCAATTAGGTCATTCCTTTAATTTGGAAGAAGTATTCGGCCAAGGAGTAAAGAAGCAGAATCAATTAAAAACTTTAGACTGCAACGacgaatgtaaaataatagaacGAAATAGAAGATTAGCGTTGGGTTTGCAAATTGCAAATCCGGATTTAAGTGGTAAATTAATGCCCAGATACAGCGATTTTATGAAACAGTGGGCTAAAAAGGATCCGCATTTTTGCCAAATGGTCCACGAGAAATTAACGGAATTAGTTCAACTAGCAAAGACCTCTAAGCAAAAATCACGCAGTTATTCTTTTGATAGTATGAATAAAGataaacgtaattttattcatgAATCTTGTGAACATTTCGGTTGTGAAAGTCAAGCATATGATCAAGAGCCAAAAAGAAATGTTGTTGCAACTGCTGTTAAAGATAAGtgTTGGTTACCTAGCTATAGTTTATTAGAAATTGTGCAACGGGAGAATGGCCAGAGAAAAGTTCCAGGTCCAATGTTAAATACTACAAAAACTGATGGATCTGTAAAGACAATATTATCACTGCCTGcgaagaaattccaaaaatcaGAAACGCCATCAACTATAAAGACATCAGAACCAGAAATagattattttgattataaagGCTAA
Protein Sequence: MATWDGSYLGPDDEDYYQMYADQNTPGPASGNWALFSDNMSHDYLQPKREFYVQNERMFEQNRPNTFYHSNVNVMPNLMATTSYEYVTNPMNTHALNSQEYYSHVVKPEQCYLSDAPCNCDNNLTNNRTKYDRMKRIEEPSSSIMSHSKLHVMAEEFVPNNREYNDRSKNESQNVKCINNVLTNSCVQDSNKTISGKYFSCNMSRHDKKYNSKKSPNGKHKERQCYKEDQCYKKYAYANYYQQHVRAHKLQGNKYFINKHYSENSQVSSECANENASDERPMNNDVACSSKENCATNSNKGESSSNIKISSNRHKNLSNKNNNERIIIDDNNVQDNNVQDNNVQDNNVQDNNVQNNNVQDDNIQDNVQDNNIQDSNVQESNNLVKEFTYYNSGLKQTYNNHRNARRYEYSDRYSREGNFKERRHHYQRYGRENYGKEDRFRAKDQTCSNEECNEYKDKCFNVETGSDAKQAIEKRHNYRRYKAFKEHYKGNFENKVVILKEKDKGKYTSENKEKENEHWRSRRKINERNNIPKRGQNKKSLVDSDASQRERLAEQLNKGELECLVCCEYIKQNDYTWSCSNCYHVFHLKCIKKWVNSSQDDNGWRCPACQNVSSIIPEDYFCFCGKVRAPEWNRRDIAHSCGEVCGRTLSKNDCPHKCTLLCHPGSCPQCTAMVTKYCGCGRTLQTVQCKTHKLLKCDSICGKDLNCGRHKCQSKCHYGECEKCEKTVEQVCHCGKFSHVLMCESYIPPACACEVICEKLLECGNHICTKLCHPGACESCSLTPGKITTCCCGQTPLPDKRQTCLDPIPVCDQICSKNLNCGPPDDPHKCKVKCHVGDCPVCDLTTIVKCRCGNMEKEIACKRLVSKTDVRCEKKCSKKKSCGKHKCNKRCCIETEHICPAICPKTLSCGKHQCERNCHKGRCQPCWRTSFYELRCECGASVVYPPVPCGARRPTCDKPCSRQHPCGHEVLHNCHSEPNCPPCTVLTQRWCHGKHELRKAVPCYVDEISCGLPCNKPISCGRHKCITTCHSGPCEKPGQQCTQPCTVQREMCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCAENSKEYQRIASSILASKMADMQLGHSFNLEEVFGQGVKKQNQLKTLDCNDECKIIERNRRLALGLQIANPDLSGKLMPRYSDFMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNKDKRNFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTTKTDGSVKTILSLPAKKFQKSETPSTIKTSEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01418699;
90% Identity: iTF_00983908; iTF_00734260; iTF_01418070; iTF_00982650;
80% Identity: -