Basic Information

Insect: Melipona quadrifasciata
Gene Symbol: stc
Assembly: GCA_001276565.1
Location: KQ438551.1:103731-109860[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 1.4e+04 -4.4 1.6 15 19 602 606 601 606 0.81

2 15 0.087 6.1e+02 0.2 0.4 4 10 635 641 634 641 0.95

3 15 2.7e-05 0.19 11.4 14.9 4 19 652 667 650 667 0.93

4 15 6.7e-08 0.00047 19.8 13.1 1 18 703 720 703 721 0.97

5 15 0.37 2.6e+03 -1.8 1.5 7 13 725 731 725 732 0.81

6 15 1.2e-08 8.6e-05 22.1 11.5 1 19 759 777 759 777 0.98

7 15 1.5e-06 0.011 15.4 10.9 4 18 824 838 817 839 0.88

8 15 1.7 1.2e+04 -3.9 2.0 5 10 867 872 867 872 0.93

9 15 0.0078 55 3.6 9.1 1 11 878 888 878 889 0.96

10 15 0.034 2.4e+02 1.6 1.0 4 10 893 899 892 899 0.93

11 15 4.1e-09 2.9e-05 23.7 13.9 1 19 905 923 905 923 0.98

12 15 0.98 6.9e+03 -3.1 0.8 6 10 952 956 951 956 0.92

13 15 2 1.4e+04 -6.3 10.6 10 19 970 980 959 980 0.76

14 15 5.4e-07 0.0038 16.9 13.6 1 16 1016 1031 1016 1042 0.85

15 15 8.4e-06 0.059 13.1 13.6 1 19 1048 1067 1048 1067 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	1.4e+04	-4.4	1.6	15	19	602	606	601	606	0.81
2	15	0.087	6.1e+02	0.2	0.4	4	10	635	641	634	641	0.95
3	15	2.7e-05	0.19	11.4	14.9	4	19	652	667	650	667	0.93
4	15	6.7e-08	0.00047	19.8	13.1	1	18	703	720	703	721	0.97
5	15	0.37	2.6e+03	-1.8	1.5	7	13	725	731	725	732	0.81
6	15	1.2e-08	8.6e-05	22.1	11.5	1	19	759	777	759	777	0.98
7	15	1.5e-06	0.011	15.4	10.9	4	18	824	838	817	839	0.88
8	15	1.7	1.2e+04	-3.9	2.0	5	10	867	872	867	872	0.93
9	15	0.0078	55	3.6	9.1	1	11	878	888	878	889	0.96
10	15	0.034	2.4e+02	1.6	1.0	4	10	893	899	892	899	0.93
11	15	4.1e-09	2.9e-05	23.7	13.9	1	19	905	923	905	923	0.98
12	15	0.98	6.9e+03	-3.1	0.8	6	10	952	956	951	956	0.92
13	15	2	1.4e+04	-6.3	10.6	10	19	970	980	959	980	0.76
14	15	5.4e-07	0.0038	16.9	13.6	1	16	1016	1031	1016	1042	0.85
15	15	8.4e-06	0.059	13.1	13.6	1	19	1048	1067	1048	1067	0.97

Sequence Information

Coding Sequence: ATGGCTACATGGGACGGTTCTTATTTGGGACCGGATGACGAAGactattatcaaatatatgcTGATCAGAATACACCCGGACCTGCGTCAGGAAATTGGGCATTATTCTCTGATAATATGAGTCATGATTATTTACAACCTAAACGCGAGttttatgtacaaaatgaaCGCATGTTTGAACAGAATAGACCAAATACCTTTTATCATTCGAATGTGAATGTTATGCCAAACTTGATGGCCACCACTAGTTATGAATATGTAACGAATCCAATGAATACGCATGCACTGAACAGTCAGGAGTACTATTCGCATGTTGTCAAACCTGAACAATGTTATTTGTCTGATGCCTCTTGTAATtgcgataataatttaacaaacaacAGAAACAAGTATGATTGTATGAAAAGAATCGAAGAACCTTCGAGTAGTATAATGAGTCACTCAAAATTACATGTTATGGCCGAGGAGTTTGTGCCAAATAATAGAGAATACAATGATAGAAGCAAAAATGAGTCGCagaatgtaaaatgtattaacaATGTATTAACAAATTCTTGTGTCCAAGATAGTAACAAGACAATATcaggtaaatatttttcttgcaacATGAATAGGCATGATAAAAAGTACAATAGCAAAAAGAGTCCCAATGGTAAGCACAAAGAAAGACAGTGTTACAAAGAAGACCAATGTTACAAAAAGTACGCGTATGCAAATTACTATCAGCAACATGTCAGAGCTCATAAACTTCAAGGAAATAAGTACTTTATTAATAAGCATTATTCAGAAAACTCGCAAATAAGTTCAGAGTGTGCAAATGAGAATGCATCTGATGAACGTCCAATGAATAATGATGTTGCTTGCAGTAGTAAAGAGAATTGTGCAACAAATTCGAATAAAGGAGAATCatcttcaaatataaaaataagttcaaatagacataaaaatttatcaaataagaataataatgaaagaattattattgatgATAATAACGTACAGGATAACAACGTACAGGATAACAACGTACAGAATGACAATGTACAGAATGACAATGTACAGGATGACAACGTACAGAATAACAACATACAGGATAACAACATACAGGATAGTAATGTACAGGAATCCAATAATTTAGTTAAAGAATTTACTTACTATAACTCTGGATTAAAACAGACCTACAATAATCATAGAAATGCAAGGAGATATGAGTACAATGATAGATATAATAAAGAAGGAAACTTTAAAGAAAGGCGACATCACTATCAGAGATATGGCAGAGAGAATTATGGTAAAGAAGATAGATTTAGAGTGAAAGATCAAACGTGCAGTAATGAAGAATGTAATGAATACAAAGATGAATGTTTCAACGAGGAAACTGCGTCAGATGCAAAACAAGCAATAGAGAAAAGGCATAATTATCGGCGATATAAAGCATTTAAGGAACATTACAaaggtaattttgaaaataaagtggtaattttgaaagagaaagataaaggGAAATATACatctgaaaataaagaaaatgagaatgaACATTGGAGAAGTAGAAGGAAAATTAATGacagaaataatattccaaaacggggacaaaataaaaaatcactcgTTGATAGCGATGCAAGTCAGAGAGAAAGACTAGCAGAACAACTGAATAAGGGAGAATTGGAATGCTTAGTCTGTTGTGAATACATTAAGCAGAATGATTATACTTGGTCATGCTCCAATTGCTATCacgtgtttcatttaaaatgtattaaaaaatgggTAAACTCATCACAAGATGATAATGGTTGGAGATGTCCGGCATGTCAAAATGTTAGCTCAATAATTCCCGAGGATTACTTTTGCTTTTGTGGAAAAGTGAGAGCACCTGAATGGAATCGTAGAGATATTGCACATTCTTGCGGCGAAGTTTGTGGTAGAACTCTATCGAAAAATGATTGTCCACATAAATGCACTCTTTTGTGCCATCCAGGATCTTGTCCACAATGTACAGCAATGGTAACAAAATATTGTGGCTGTGGTAGAACTCTACAAACAGTACAATGTAAAACTCATAAATTATTGAAGTGTGATTCTATATGTGgtaaagatttaaattgtGGTAGACACAAATGTCAAAGTAAATGCCATTATGGAGAAtgtgaaaaatgtgaaaaaacaGTAAAGCAAGtatgTCATTGTGGGAAATACTCACTTGTATCAATGTGTGAAAGTTATATTCCACCTGCATATGCTTGTGAGgtcatttgtgagaaattgttGGAATGTGGTAATcacatttgtacaaaattatgtCATCCAGGGGCTTGCGAATCTTGCTCTTTGACTCCTGGGAAAATTACAACTTGTTGCTGTGGACAAACACCATTACCAGATAAAAGACAAACTTGTTTAGATCCAATTCCTGTCTGTGACCAAAtatgttcaaaaaatttaaattgtggACCATCTGATGACCCCCATAAGTGTAAAGTAAAATGTCACGTAGGAGATTGTCCTGTTTGCGATTTAACCACCATAGTTAAGTGTCGTTGTGGAAACATGGAGAAAGAAATAGCTTGTAAACGTTTGGTATCAAAAACTGATGTACGATGTGAaaagaaatgttcaaaaaaaaaatcctgcGGCAAACACAAATGTAATAAACGATGTTGTATAGAAACAGAACATACTTGTCCAGCAATCTGTCCAAAAACGCTAAGCTGTGGAAAGCATCAATGCGAACGAAATTGTCATAAAGGAAGATGTCAACCTTGTTGGCGAACTAGTTTTTACGAATTACGCTGCGAATGCGGAGCTTCTGTGGTGTATCCTCCTGTTCCTTGTGGAGCAAGAAGACCTATGTGTGAGAAACCGTGCTCTCGTCAGCATTCTTGTGGCCACGAAGTATTGCATAATTGCCATAGTGAACCAAATTGCCCACCTTGCACTGTCCTTACTCAAAGATGGTGTCACGGCAAGCACGAGTTACGTAAGGCTGTACCATGTTATGTTGACGAAATTTCATGTGGCTTACCATGTAACAAGCCCATATCTTGCGGTCGACATAAATGTATTACTACTTGTCATTCCGGACCATGTGAAAAACCGGGCCAACAGTGTACTCAACCTTGCACCGTTCAAAGAGAAATGTGTGGACATATCTGTGCTGCCCCGTGCCATGAGGGTAAATGTCCAGATACACCTTGCAAGGAAATGGTTAAGGTGACGTGTCAATGTGGGCATAGGACCATGTCACGTGTTTGTGccgaaaattccaaagaataTCAAAGAATAGCAAGTAGTATATTAGCCAGTAAAATGGCTGATATGCAATTAGGTCATTCCTTTAATTTGGAAGAAGTATTCGGCCAAGGAGTAAAGAAGCAGAATCAGTTAAAAACTTTAGACTGCAACGacgaatgtaaaataatagaacGAAATAGAAGATTAGCGTTGGgtttgcaaattgcaaatccGGATTTAAGTGGTAAATTAATGCCCAGATACAGCGATTTTATGAAACAGTGGGCTAAAAAGGATCCGCATTTTTGCCAAATGGTCCACGAGAAATTAACGGAATTAGTTCAACTAGCAAAGACCTCTAAGCAAAAATCACGCAGTTATTCCTTTGATAGTATGAATAAAGATAAACGTCATTTTATTCATGAATCTTGTGAACATTTCGGTTGTGAAAGTCAAGCATATGATCAAGAGCCAAAAAGAAATGTTGTTGCAACTGCTGTTAAAGATAAGtgTTGGTTACCTAGCTATAGTTTATTAGAAATTGTGCAACGGGAGAATGGCCAGAGAAAAGTTCCAGGTCCAATGTTAAATACTACAAAAACTGATGGATCTGTAAAGACAATATTATCACTGCCTGcgaagaaattccaaaaatcaGAAACGCCATCAACTATAAAGACATCAGAACCAGAAATagattattttgattataaagGCTAA
Protein Sequence: MATWDGSYLGPDDEDYYQIYADQNTPGPASGNWALFSDNMSHDYLQPKREFYVQNERMFEQNRPNTFYHSNVNVMPNLMATTSYEYVTNPMNTHALNSQEYYSHVVKPEQCYLSDASCNCDNNLTNNRNKYDCMKRIEEPSSSIMSHSKLHVMAEEFVPNNREYNDRSKNESQNVKCINNVLTNSCVQDSNKTISGKYFSCNMNRHDKKYNSKKSPNGKHKERQCYKEDQCYKKYAYANYYQQHVRAHKLQGNKYFINKHYSENSQISSECANENASDERPMNNDVACSSKENCATNSNKGESSSNIKISSNRHKNLSNKNNNERIIIDDNNVQDNNVQDNNVQNDNVQNDNVQDDNVQNNNIQDNNIQDSNVQESNNLVKEFTYYNSGLKQTYNNHRNARRYEYNDRYNKEGNFKERRHHYQRYGRENYGKEDRFRVKDQTCSNEECNEYKDECFNEETASDAKQAIEKRHNYRRYKAFKEHYKGNFENKVVILKEKDKGKYTSENKENENEHWRSRRKINDRNNIPKRGQNKKSLVDSDASQRERLAEQLNKGELECLVCCEYIKQNDYTWSCSNCYHVFHLKCIKKWVNSSQDDNGWRCPACQNVSSIIPEDYFCFCGKVRAPEWNRRDIAHSCGEVCGRTLSKNDCPHKCTLLCHPGSCPQCTAMVTKYCGCGRTLQTVQCKTHKLLKCDSICGKDLNCGRHKCQSKCHYGECEKCEKTVKQVCHCGKYSLVSMCESYIPPAYACEVICEKLLECGNHICTKLCHPGACESCSLTPGKITTCCCGQTPLPDKRQTCLDPIPVCDQICSKNLNCGPSDDPHKCKVKCHVGDCPVCDLTTIVKCRCGNMEKEIACKRLVSKTDVRCEKKCSKKKSCGKHKCNKRCCIETEHTCPAICPKTLSCGKHQCERNCHKGRCQPCWRTSFYELRCECGASVVYPPVPCGARRPMCEKPCSRQHSCGHEVLHNCHSEPNCPPCTVLTQRWCHGKHELRKAVPCYVDEISCGLPCNKPISCGRHKCITTCHSGPCEKPGQQCTQPCTVQREMCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCAENSKEYQRIASSILASKMADMQLGHSFNLEEVFGQGVKKQNQLKTLDCNDECKIIERNRRLALGLQIANPDLSGKLMPRYSDFMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNKDKRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTTKTDGSVKTILSLPAKKFQKSETPSTIKTSEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01418699;
90% Identity: iTF_00983329;
80% Identity: -