Basic Information

Insect: Melipona beecheii
Gene Symbol: stc
Assembly: GCA_032399605.1
Location: JAUCMO010000505.1:375608-380565[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3 2e+04 -4.4 1.6 15 19 584 588 583 588 0.81

2 15 0.13 8.4e+02 0.3 0.4 4 10 617 623 616 623 0.95

3 15 4e-05 0.26 11.5 14.9 4 19 634 649 632 649 0.93

4 15 9.9e-08 0.00065 19.8 13.1 1 18 685 702 685 703 0.97

5 15 0.41 2.7e+03 -1.3 1.7 7 13 707 713 707 714 0.84

6 15 1.8e-08 0.00012 22.1 11.5 1 19 741 759 741 759 0.98

7 15 4.6e-06 0.03 14.5 11.9 4 18 806 820 799 821 0.88

8 15 2.5 1.6e+04 -3.8 2.0 5 10 849 854 849 854 0.93

9 15 0.012 75 3.6 9.1 1 11 860 870 860 871 0.96

10 15 0.05 3.3e+02 1.6 1.0 4 10 875 881 874 881 0.93

11 15 6e-09 3.9e-05 23.7 13.9 1 19 887 905 887 905 0.98

12 15 1.2 7.6e+03 -2.8 0.8 5 10 933 938 933 938 0.95

13 15 3 2e+04 -6.3 10.6 10 19 952 962 941 962 0.76

14 15 5.4e-07 0.0035 17.4 13.0 1 16 998 1013 998 1024 0.85

15 15 1.2e-05 0.08 13.1 13.7 1 19 1030 1049 1030 1049 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3	2e+04	-4.4	1.6	15	19	584	588	583	588	0.81
2	15	0.13	8.4e+02	0.3	0.4	4	10	617	623	616	623	0.95
3	15	4e-05	0.26	11.5	14.9	4	19	634	649	632	649	0.93
4	15	9.9e-08	0.00065	19.8	13.1	1	18	685	702	685	703	0.97
5	15	0.41	2.7e+03	-1.3	1.7	7	13	707	713	707	714	0.84
6	15	1.8e-08	0.00012	22.1	11.5	1	19	741	759	741	759	0.98
7	15	4.6e-06	0.03	14.5	11.9	4	18	806	820	799	821	0.88
8	15	2.5	1.6e+04	-3.8	2.0	5	10	849	854	849	854	0.93
9	15	0.012	75	3.6	9.1	1	11	860	870	860	871	0.96
10	15	0.05	3.3e+02	1.6	1.0	4	10	875	881	874	881	0.93
11	15	6e-09	3.9e-05	23.7	13.9	1	19	887	905	887	905	0.98
12	15	1.2	7.6e+03	-2.8	0.8	5	10	933	938	933	938	0.95
13	15	3	2e+04	-6.3	10.6	10	19	952	962	941	962	0.76
14	15	5.4e-07	0.0035	17.4	13.0	1	16	998	1013	998	1024	0.85
15	15	1.2e-05	0.08	13.1	13.7	1	19	1030	1049	1030	1049	0.97

Sequence Information

Coding Sequence: ATGGCCACATGGGACGGTTCTTATTTGGGACCGGATGATGAAGATTATTATCAAATGTATGCTGATCAGAATACACCCGGGCCTGCGTCAGGAAATTGGGCATTATTCTCTGATAATATGAGTCATGATTATTTACAACCTAAACGCGAGttttatgtacaaaatgaACGCATGTTTGAACAGAATAGACCAAATACCTTCTATCATTCGAATGTGAATGTTATGCCAAACTTGATGGCCACCACTAGTTATGAGTATGTAACGAATCCAATGAATACGCATGCACTGAACAGTCAGGAGTACTATTCGCATGTTGTCAAACCTGAACAATGTTATTTGTCTGATGCCCCTTGTAATTGCGATAATAACTTAACAAACAACAGAAACAAGTATGATCGTAtgaaaagaatcgaagaacCTTCGAGTAGTATAATGAGTCACTCAAAATTACATGTTATGGCCGAGGAGTTTGTGCCAAATAATAGAGAATACAATGATAGAAGCAAAAATGAGTCGCagaatgtaaaatgtattacCAATGTATTAACAAATTCTTGTGTCCAAGATAGTAACAAGACAATATcaggtaaatatttttcttgcaacATGAGTAGGCATGATAAAAAGTACAATAGTAAAAAGAGTCCCAATGGTAAGCACAAAGAAAGACAGTGTTACAAAGAAGACCAATGTTACAAGAAGTACGCATATGCAAATTACTATCAGCAACATGTCAAAGCTCATAAACTTCAAGGAAATAAGTACTTTATTAATAAGCATTATTCAGAAAACTCGCAAGTAAGTTCAGAGTGTGCAAATGAGAATGCATCTGATGAACGTCCAATGAATAATGATGTTGCTTGCAGTAGTAAAGAGAATTGTGCAACAAATTCGAATAAAGGAGAATCatcttcaaatataaaaataagttcaaatggacataaaaatttatcaaataacgTACAGAATAATAACGCACAGGATAACAACGTACAAGATGACAACGTACAGGATGACAACGTACAGGATAACGTACAGGATAATAACATACAGGATAGTAATGTACAGGAATCCAATAATCTAGTCAAAGAATTTACTTACTATAACTCTGGATTAAAACAGACCTACAATAATCATAGAAATGCAAGAAGATATGAGTACAATGATAGATATAATagagaaggaaattttaaagaaaggcGACATCATTATCAGAGATATGGCAGAGAGAATTATGGTAAAGAAGATAGATTTAGAGCGAAAGATCAAACGTGCAGTAATGAAGAATGTAATGAATACAAAGATGAATGTTTCAACGAGGAAACTGGGTCAGATGCAAAACAAGCAATAGAGAAAAGGCATAATTATCGGCGATATAAAGCATTTAAGGAACATTACAAaggtaattttgaaaataaagtggtaattttgaaagagaaagataaaggGAAATATACatctgaaaataaagaaaaggagaatGAACATTGGAGAAGTAGaaggaaaattaatgaaagaaataatatttcaaaacggggacaaaataaaaaatcactcGTTGATAGCGATGCAAGTCAGAGAGAAAGACTAGCAGAACAACTGAATAAGGGAGAATTGGAATGCTTAGTGTGTTGTGAATACATTAAGCAGAATGATTATACTTGGTCATGCTCTAATTGCTATCacgtatttcatttaaaatgtattaaaaaatgggTAAACTCATCACAAGATGATAATGGTTGGAGATGTCCGGCATGTCAAAATGTTAGCTCAATAATTCCCGAGGATTACTTTTGCTTTTGTGGAAAAGTGAGAGCACCTGAATGGAATCGTAGAGATATTGCACATTCTTGCGGCGAAGTTTGTGGTAGAACTCTATCAAAAAATGATTGTCCACATAAATGCACTCTTTTGTGTCATCCAGGATCTTGTCCACAATGTACAGCAATGGTGACAAAGTATTGTGGCTGTGGTAGAACTCTACAAACAGTACAATGTAAAACTCATAAATTATTGAAGTGTGATTCTATATGTGgtaaagatttaaattgtGGTAGACACAAATGTCAAAGTAAATGTCATTATGGAGAAtgtgaaaaatgtgaaaaaacaGTAGAACAAgtatgTCATTGTGGGAAATTCTCACATGTATTAATGTGTGAAAGTTATATTCTACCTGCATATGCTTGTGAGGTCATTTGTGAGAAATTGTTGGAATGTGGTAATCacatttgtacaaaattatgtCATCCAGGGGCTTGCGAATCTTGCTCTTTGACTCCTGGGAAAATTACAACCTGTTGCTGTGGACAAACACCATTACCAGATAAAAGACAAACTTGTTTAGATCCAATTCCTGTCTGTGACCAAAtatgttcaaaaaatttaaattgtggACCACCTGATGACCCTCATAAGTGTAAAGTAAAATGTCATGTAGGAGATTGTCCTGTTTGCGATTTAACCACCATTGTTAAGTGTCGTTGTGGAAACATGGAGAAAGAAATAGCTTGTAAACGTCTCGTATCAAAAACTGATGTACGATGTGAAAAGAAATGTTCAAAGAAAAAATCCTGCGGCAAACACAAGTGTAATAAACGATGTTGTATAGAAACAGAACATACTTGTCCAGCAATCTGTCCAAAAACGCTAAGCTGTGGAAAGCATCAATGCGAACGAAATTGTCATAAAGGAAGATGTCAACCTTGTTGGCGAACTAGTTTTTACGAATTACGCTGCGAATGTGGAGCTTCTGTGGTGTATCCTCCTGTTCCTTGTGGGGCAAGAAGACCTACGTGTGACAAACTGTGCTCTCGTCAGCATTCTTGTGGCCACGAAGTATTGCATAATTGCCATAGTGAACCAAATTGTCCACCTTGCACTGTCCTTACTCAAAGATGGTGTCACGGCAAGCACGAGTTACGTAAAGCTGTACCATGTTATGTTGACGAAATTTCATGTGGCTTACCATGTAACAAGCCCATATCTTGCGGTCGACATAAATGTATTACTACTTGTCATTCCGGACCATGTGAAAAATCGGGCCAACAGTGTACTCAACCTTGCACTGTTCAAAGAGAAATGTGTGGACATATCTGTGCTGCCCCGTGCCACAAGGGTAAATGTCCAGATACACCTTGCAAGGAAATGGTTAAGGTGACGTGTCAATGTGGGCATAGGACCATGTCACGTGTTTGTGccgaaaattccaaagaataTCAAAGAATAGCAAGTAGTATATTAGCTAGTAAAATGGCTGATATGCAATTAGGTCATTCCTTTAATTTGGAAGAAGTATTCGGCCAAGGAGTAAAGAAGCAGAATCAGTTAAAAACTTTAGACTGCAACgacgaatgtaaaataatagaacGAAATAGAAGATTAGCGTTGGgtttgcaaattgcaaatcCCGATTTAAGTGGTAAATTAATGCCCAGATACAGCGATTTTATGAAACAGTGGGCTAAGAAGGATCCGCATTTTTGCCAAATGGTCCACGAGAAATTAACGGAATTAGTTCAACTAGCAAAGACCTCTAAGCAAAAATCACGCAGTTATTCCTTTGATAGTATGAATAAAGATAAACGTCATTTTATTCATGAATCTTGTGAACATTTCGGTTGTGAAAGTCAAGCATATGATCAAGAGCCAAAAAGAAATGTTGTTGCAACTGCTGTTAAAGATAAGtgTTGGTTACCTAGCTATAGTTTATTAGAAATTGTGCAACGGGAGAATGGCCAGAGAAAAGTTCCAGGTCCAATGTTAAATACTACAAAAACTGATGGATCTGTAAAGACAATATTATCACTGCCTGcgaagaaattccaaaaatcaGAAACGCCATCAACCGTAAAGACATCAGAACCAGAAAtagattattttgattataaagGCTAA
Protein Sequence: MATWDGSYLGPDDEDYYQMYADQNTPGPASGNWALFSDNMSHDYLQPKREFYVQNERMFEQNRPNTFYHSNVNVMPNLMATTSYEYVTNPMNTHALNSQEYYSHVVKPEQCYLSDAPCNCDNNLTNNRNKYDRMKRIEEPSSSIMSHSKLHVMAEEFVPNNREYNDRSKNESQNVKCITNVLTNSCVQDSNKTISGKYFSCNMSRHDKKYNSKKSPNGKHKERQCYKEDQCYKKYAYANYYQQHVKAHKLQGNKYFINKHYSENSQVSSECANENASDERPMNNDVACSSKENCATNSNKGESSSNIKISSNGHKNLSNNVQNNNAQDNNVQDDNVQDDNVQDNVQDNNIQDSNVQESNNLVKEFTYYNSGLKQTYNNHRNARRYEYNDRYNREGNFKERRHHYQRYGRENYGKEDRFRAKDQTCSNEECNEYKDECFNEETGSDAKQAIEKRHNYRRYKAFKEHYKGNFENKVVILKEKDKGKYTSENKEKENEHWRSRRKINERNNISKRGQNKKSLVDSDASQRERLAEQLNKGELECLVCCEYIKQNDYTWSCSNCYHVFHLKCIKKWVNSSQDDNGWRCPACQNVSSIIPEDYFCFCGKVRAPEWNRRDIAHSCGEVCGRTLSKNDCPHKCTLLCHPGSCPQCTAMVTKYCGCGRTLQTVQCKTHKLLKCDSICGKDLNCGRHKCQSKCHYGECEKCEKTVEQVCHCGKFSHVLMCESYILPAYACEVICEKLLECGNHICTKLCHPGACESCSLTPGKITTCCCGQTPLPDKRQTCLDPIPVCDQICSKNLNCGPPDDPHKCKVKCHVGDCPVCDLTTIVKCRCGNMEKEIACKRLVSKTDVRCEKKCSKKKSCGKHKCNKRCCIETEHTCPAICPKTLSCGKHQCERNCHKGRCQPCWRTSFYELRCECGASVVYPPVPCGARRPTCDKLCSRQHSCGHEVLHNCHSEPNCPPCTVLTQRWCHGKHELRKAVPCYVDEISCGLPCNKPISCGRHKCITTCHSGPCEKSGQQCTQPCTVQREMCGHICAAPCHKGKCPDTPCKEMVKVTCQCGHRTMSRVCAENSKEYQRIASSILASKMADMQLGHSFNLEEVFGQGVKKQNQLKTLDCNDECKIIERNRRLALGLQIANPDLSGKLMPRYSDFMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNKDKRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTTKTDGSVKTILSLPAKKFQKSETPSTVKTSEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01418699;
90% Identity: iTF_00983329;
80% Identity: -