Basic Information

Insect: Frieseomelitta varia
Gene Symbol: stc
Assembly: GCA_011392965.1
Location: WNWW01000192.1:191962-198047[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 1e+04 -4.4 1.6 15 19 568 572 567 572 0.81

2 15 0.085 4.3e+02 0.3 0.4 4 10 601 607 600 607 0.95

3 15 2.6e-05 0.13 11.5 14.9 4 19 618 633 616 633 0.93

4 15 4.8e-08 0.00024 20.2 12.3 1 18 669 686 669 687 0.97

5 15 1.1 5.5e+03 -3.3 1.5 7 13 691 697 691 698 0.79

6 15 4.5e-09 2.3e-05 23.5 13.2 1 19 725 743 725 743 0.98

7 15 3.9e-06 0.02 14.1 11.1 4 18 790 804 783 805 0.86

8 15 1.6 8.2e+03 -3.8 2.0 5 10 833 838 833 838 0.93

9 15 0.0056 29 4.0 9.2 1 11 844 854 844 855 0.95

10 15 0.08 4.1e+02 0.4 1.1 4 10 859 865 858 865 0.92

11 15 9.6e-08 0.00049 19.3 15.0 1 19 871 889 871 889 0.98

12 15 0.62 3.2e+03 -2.5 0.7 5 10 917 922 917 923 0.88

13 15 2 1e+04 -6.3 10.6 10 19 936 946 925 946 0.76

14 15 2.3e-07 0.0012 18.1 12.3 1 16 982 997 982 1008 0.85

15 15 8.1e-06 0.041 13.1 13.6 1 19 1014 1033 1014 1033 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	1e+04	-4.4	1.6	15	19	568	572	567	572	0.81
2	15	0.085	4.3e+02	0.3	0.4	4	10	601	607	600	607	0.95
3	15	2.6e-05	0.13	11.5	14.9	4	19	618	633	616	633	0.93
4	15	4.8e-08	0.00024	20.2	12.3	1	18	669	686	669	687	0.97
5	15	1.1	5.5e+03	-3.3	1.5	7	13	691	697	691	698	0.79
6	15	4.5e-09	2.3e-05	23.5	13.2	1	19	725	743	725	743	0.98
7	15	3.9e-06	0.02	14.1	11.1	4	18	790	804	783	805	0.86
8	15	1.6	8.2e+03	-3.8	2.0	5	10	833	838	833	838	0.93
9	15	0.0056	29	4.0	9.2	1	11	844	854	844	855	0.95
10	15	0.08	4.1e+02	0.4	1.1	4	10	859	865	858	865	0.92
11	15	9.6e-08	0.00049	19.3	15.0	1	19	871	889	871	889	0.98
12	15	0.62	3.2e+03	-2.5	0.7	5	10	917	922	917	923	0.88
13	15	2	1e+04	-6.3	10.6	10	19	936	946	925	946	0.76
14	15	2.3e-07	0.0012	18.1	12.3	1	16	982	997	982	1008	0.85
15	15	8.1e-06	0.041	13.1	13.6	1	19	1014	1033	1014	1033	0.97

Sequence Information

Coding Sequence: ATGGCCACATGGGACGGTTCTTATTTGGGACCGGATGACGAAGACTACTACCAAATGTATGCTGATCAGAATGCATCTGGACCTGCGTCAGGAAATTGGGCATTATTCTCTGATAATATGAGTCATGAGTATTTACAACCTAAACGCGAGTTCTATGTACAAAATGAACGCATGTTTGAACAGAATAGACCAAGTACCTTCTATCATTCGAATGTGAATGTTATGCCAAACTTGGTGGCCACGACCACTAGTTATGAGTATGTAACGAATCCAATGAATACGCATGCATTGAATAGTCAGGAGTACTATCCACATGTTGCCAAACCTGAGCAATGTTATTTGTCCAATGCCTCTTGGAATTGCGATAATGACTTAGAAGGCAACAGAGACAAGTACGATCATACGAAAAGCATCAAAGAACCTTCGGATAGTATAATGAGTCACTCAAAATTACATGTAATGGCCGAGGAGTTTGTGCCAAATAATAGAGAATATGATGATAGGAGCAAAAATGAGTCGCAGAACGTAAAATGTACTAACAATACTTGTGTCCAACATAGTAACAAGATAGTACcaggtaaatatttttcttgcaaCATGAATAGGcatgataaaaaatacaatagcaAAAAGAATCCCAATGGTAAGCACAAAGAAGACCAATGTTATAAGAAGTATGCATATGCAAATTACTATCAGCAACATGTCAGGGCTCATAAACTTCAAGGTAATAAGTACTTTATTAATAAGCATTATTCAGAAAACTCGCAAGTAAgttccaaatttccaaatgagAATGCATCGGATGAACGTCCAATGAATAATGATGTTGCTTGCAATAGTAAAGAAGATTGTGCAACAAATTCGAATAAAGGAAAATCatcttcaaatataaaaataagttcaaatagacataaaaatttatcacataagaataataatgaaagaattattattgatgatAATAACGTACAGGATAATAACATACAGGATAGTAATGTACAGGATAATAATGTACAGGAATCCAATAATCTAGTTAAAGAATTTACTTACTATAACTCTGGATTAAAACAGACCTACAATAATCATAGAAATGTAAGGAGATATCAGTACAATGATAGATATAATagagaaggaaatttttataaagaaaggCGACATCATTATCCGAGATATGGCAGAGAGAATTGTGGTaaagaagataaatttaaagcGAAAGATCAAACGTGCAGTAGTGAAGAATGTAATGAatataaagaatgtttcaacGAGGAAACTGGGTTAGATGCAAAAGAAGCAATAGAGAAAAGGCACAATTATCAGCGATATAATGCATTTAAGGAACATTACAGaggtaattttgaaaataaactggtaattttgaaagagaaagataaaggGAAATATGtatctgaaaataaagaaaaggagaatgaACATTGGAGAAGTAGaaggaaaattaatgaaagaaataatattccaaaacggggacaaaataaaaaatcacttGTTGATAACGATGCAAGTCAGAGAGAAAGACTAGCAGAACAACTGAATAAGGGTGAATTGGAATGCTTAGTATGTTGTGAATGTATTAAACAGAATGATTATACTTGGTCATGCTCCAATTGCTATCACGTGTTTCacttaaaatgtattaaaaaatgggCAAACTCATCACAAGCTGAAAATGGTTGGAGATGTCCGGCATGTCAAAATGTTAGCTCAATAATTCCCGACGATTACTTTTGCTTTTGTGGGAAAGTGAGAGCACCTGAATGGAATCGTAGAGATATTGCACATTCTTGCGGCGAAGTTTGTGGTAGAACATTATCGAAAAATGATTGTCCACATAAATGCACCCTTTTGTGTCATCCAGGATCTTGTCCACAATGTACAGCAATGGTAACAAAGTATTGTGGCTGTGGTAGAACTCTACAAACAGTACAATGTAAAACTCATAAATTATTGAAGTGTGATTCTATATGTGGTAAAGATTTAAATTGTGGTAGACACAAATGTCAAAGTAAATGTCATTATGGAGAATGtgcaaaatgtgaaaaaacaATAGAGCAAGcatGTCATTGcgggaaattttcaaatgtattaatttgtGAGAGTTATATTCCACCTGCATATGCTTGTGAGGTCATTTGTGGGAAATTGTTGGAATGTGGTAATCacgtttgtacaaaattatgtCATCCGGGCGCTTGCAAACCTTGCTCTTTGACTCCTGGGAAAATTACAACCTGTTGCTGTGGACAAACACCATTACCAGATAAAAGACAAACTTGTTTAGATCCAATTCCTGTCTGTGACCAAATatgttcgaaaaatttaaattgtggACAACCTGATGACCCTCATAATTGTAAAGTAAAATGTCACGTAGGAGATTGTCCTGTTTGCGATTTAACCACCAATGTTAAGTGTCGTTGTGGAAACATGGATAAAGAAATAGCTTGTAAAGATTTGATATCAAAAGCTGATGTACGATGCGAAAAGAAATGTTCAAAGAAAAAATCCTGCGGCAAACACAAATGTAATAAACGATGTTGTGTGGAAACAGAACATACTTGTCCAGTAATCTGTTCGAAAACGCTAAGCTGTGGAAAGCATCAATGCGGACGAAATTGTCATAAAGGAAGATGTCAACCTTGTTGGCGAACTAGTTTTTACGAATTACGCTGCGAATGTGGAGCTTCTGTGGTGTATCCTCCTGTTCCTTGTGGAACAAGAAGACCCACGTGTGACAAACCGTGCTCCCGTCAGCATTCTTGTGGCCACGAAGTATTGCATAATTGCCATAGTGAACCAAATTGTCCACCTTGCACTGTCCTTACTCAAAGATGGTGTCACGGCAAGCACGAGTTACGTAAAGCTGTACCATGTTATGTGGACGAAATTTCATGTGGTTTACCATGTAACAAGCCCATATCTTGCGGTCGACATAAATGTATTACTATTTGTCATTCCGGACCATGTGAAAAACCGGGCCAACAGTGTACTCAACCTTGCACTGTTCAAAGAGAAATGTGTGGACATATCTGTGCTGCCCCGTGCCACGAGGGTAAATGTCCAGATACACCTTGCAAGGAAATGGTTAAgGTGACGTGTCAGTGTGGGCATAGGACCATGTCACGTGTTTGTGCcgaaaattccaaagaatATCAAAGAATAGCAAGTAATATATTAGCCAGTAAAATGGCTGATATGCAATTAGGTCATTCCTTTAATTTGGAAGAAGTATTCGGCCAAGGAGTAAAGAAGCAGAATCAGTTAAAAACTTTAGACTGCAACGACGAATGCAAAATAATAGAACGAAATAGAAGATTAGCGTTGGGTTTGCAAATTGTAAATCCGGATTTAAGTGGCAAATTAATGCCTAGATACAGTGATTTTATGAAACAGTGGGCTAAAAAGGATCCGCATTTTTGCCAAATGGTCCACGAGAAATTAACGGAATTAGTTCAACTAGCAAAGACCTCTAAGCAAAAATCACGCAGTTATTCCTTTGATAGTATGAATAAAGATAAACGTCATTTTATTCATGAATCTTGTGAACATTTCGGTTGTGAAAGTCAAGCATATGATCAAGAGCCAAAAAGAAATGTTGTTGCAACTGCTGTTAAAGATAAGtgtTGGTTACCTAGCTATAGTTTATTAGAAATTGTGCAACGGGAGAATGGCCAGAGAAAAGTTCCAGGTCCAATGTTAAATACTACAAAAACTGATGGATCTGTAAAGACAATATTATCACTGCCTGcgaagaaattccaaaaatcaGAAACGCCATCAACCATAAAGACATCAGAACCAGAAAtagattattttgattataaagGCTAA
Protein Sequence: MATWDGSYLGPDDEDYYQMYADQNASGPASGNWALFSDNMSHEYLQPKREFYVQNERMFEQNRPSTFYHSNVNVMPNLVATTTSYEYVTNPMNTHALNSQEYYPHVAKPEQCYLSNASWNCDNDLEGNRDKYDHTKSIKEPSDSIMSHSKLHVMAEEFVPNNREYDDRSKNESQNVKCTNNTCVQHSNKIVPGKYFSCNMNRHDKKYNSKKNPNGKHKEDQCYKKYAYANYYQQHVRAHKLQGNKYFINKHYSENSQVSSKFPNENASDERPMNNDVACNSKEDCATNSNKGKSSSNIKISSNRHKNLSHKNNNERIIIDDNNVQDNNIQDSNVQDNNVQESNNLVKEFTYYNSGLKQTYNNHRNVRRYQYNDRYNREGNFYKERRHHYPRYGRENCGKEDKFKAKDQTCSSEECNEYKECFNEETGLDAKEAIEKRHNYQRYNAFKEHYRGNFENKLVILKEKDKGKYVSENKEKENEHWRSRRKINERNNIPKRGQNKKSLVDNDASQRERLAEQLNKGELECLVCCECIKQNDYTWSCSNCYHVFHLKCIKKWANSSQAENGWRCPACQNVSSIIPDDYFCFCGKVRAPEWNRRDIAHSCGEVCGRTLSKNDCPHKCTLLCHPGSCPQCTAMVTKYCGCGRTLQTVQCKTHKLLKCDSICGKDLNCGRHKCQSKCHYGECAKCEKTIEQACHCGKFSNVLICESYIPPAYACEVICGKLLECGNHVCTKLCHPGACKPCSLTPGKITTCCCGQTPLPDKRQTCLDPIPVCDQICSKNLNCGQPDDPHNCKVKCHVGDCPVCDLTTNVKCRCGNMDKEIACKDLISKADVRCEKKCSKKKSCGKHKCNKRCCVETEHTCPVICSKTLSCGKHQCGRNCHKGRCQPCWRTSFYELRCECGASVVYPPVPCGTRRPTCDKPCSRQHSCGHEVLHNCHSEPNCPPCTVLTQRWCHGKHELRKAVPCYVDEISCGLPCNKPISCGRHKCITICHSGPCEKPGQQCTQPCTVQREMCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCAENSKEYQRIASNILASKMADMQLGHSFNLEEVFGQGVKKQNQLKTLDCNDECKIIERNRRLALGLQIVNPDLSGKLMPRYSDFMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNKDKRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTTKTDGSVKTILSLPAKKFQKSETPSTIKTSEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01418699;
90% Identity: iTF_00983329;
80% Identity: -