Basic Information

Insect: Tetragonisca angustula
Gene Symbol: stc
Assembly: GCA_036937485.2
Location: JAWNGG010000343.1:81584-86399[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3 2.5e+04 -4.4 1.6 15 19 569 573 568 573 0.81

2 15 0.13 1e+03 0.3 0.4 4 10 602 608 601 608 0.95

3 15 3.9e-05 0.32 11.5 14.9 4 19 619 634 617 634 0.93

4 15 7.2e-08 0.00059 20.2 12.3 1 18 670 687 670 688 0.97

5 15 1.6 1.3e+04 -3.3 1.5 7 13 692 698 692 699 0.79

6 15 6.8e-09 5.6e-05 23.5 13.2 1 19 726 744 726 744 0.98

7 15 5.9e-06 0.048 14.1 11.1 4 18 791 805 784 806 0.86

8 15 2.4 2e+04 -3.8 2.0 5 10 834 839 834 839 0.93

9 15 0.0085 69 4.0 9.2 1 11 845 855 845 856 0.95

10 15 0.12 9.8e+02 0.4 1.1 4 10 860 866 859 866 0.92

11 15 1.4e-07 0.0012 19.3 15.0 1 19 872 890 872 890 0.98

12 15 0.93 7.7e+03 -2.5 0.7 5 10 918 923 918 924 0.88

13 15 3 2.5e+04 -6.3 10.6 10 19 937 947 926 947 0.76

14 15 7.4e-07 0.0061 17.0 13.5 1 16 983 998 983 1009 0.85

15 15 1.2e-05 0.1 13.1 13.6 1 19 1015 1034 1015 1034 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3	2.5e+04	-4.4	1.6	15	19	569	573	568	573	0.81
2	15	0.13	1e+03	0.3	0.4	4	10	602	608	601	608	0.95
3	15	3.9e-05	0.32	11.5	14.9	4	19	619	634	617	634	0.93
4	15	7.2e-08	0.00059	20.2	12.3	1	18	670	687	670	688	0.97
5	15	1.6	1.3e+04	-3.3	1.5	7	13	692	698	692	699	0.79
6	15	6.8e-09	5.6e-05	23.5	13.2	1	19	726	744	726	744	0.98
7	15	5.9e-06	0.048	14.1	11.1	4	18	791	805	784	806	0.86
8	15	2.4	2e+04	-3.8	2.0	5	10	834	839	834	839	0.93
9	15	0.0085	69	4.0	9.2	1	11	845	855	845	856	0.95
10	15	0.12	9.8e+02	0.4	1.1	4	10	860	866	859	866	0.92
11	15	1.4e-07	0.0012	19.3	15.0	1	19	872	890	872	890	0.98
12	15	0.93	7.7e+03	-2.5	0.7	5	10	918	923	918	924	0.88
13	15	3	2.5e+04	-6.3	10.6	10	19	937	947	926	947	0.76
14	15	7.4e-07	0.0061	17.0	13.5	1	16	983	998	983	1009	0.85
15	15	1.2e-05	0.1	13.1	13.6	1	19	1015	1034	1015	1034	0.97

Sequence Information

Coding Sequence: ATGGCCACATGGGACGGTTCTTATTTGGGACCGGATGACGAAGACTATTACCAAATGTATGCTGATCAGAATGCACCCGGGCCTGCGTCAGGAAATTGGGCATTATTCTCTGATAATATGAGTCATGATTATTTACAACCTAAACGCGAATTCTATGTACAAAATGAACGCATGTTTGAACAGAATAGACCAAGTACCTTCTATCATTCGAATGTGAATGTTATGCCAAACTTAGTGGCCACGGCAGCTAGTTATGAATACGTAACGAATCCAATGAATACGCATGCATTGAATAGTCAGGAGTACTATCCACATGTTACCAAACCTGAACAATGTTATTTATCCAATGCTCCTTGGAATTGCGATAATGACTTAGAAGACAACAGAGACAAGTACGATCGTACGAAAAGAATCAAAGAACCTTCGGATAGTATAATGAGTCACTCAAAATTACATGTTATGGCCGAGGAGTTTGTGCCAAATAATAGAGAATACGATGATAGGAGCAAAAATGAGTCGCAGAACGTAAAATGTATTAACAATACAAATTCTTGTGTCCAGGATAGTAACAAGATAGTAccagataaatatttttcttgcaacATGAATAGGCatgataaaaaatacaatagcAAAAAGAGTCCCAATGGTAAGCACAAAGAAGACCAATGTTATAAGAAGTATGCATATACAAATTACTATCAGCAACATGTCAGAGCTCATAAACTTCAAGGTAATAAGTACTTTGTTAATAAGCATTATTCAGAAAACTCGCAAGTAAGTCCAAAATGTGCAAATGAGAATGCATCGGATGAACGTCCAATGAATAATGATGTTGCTTGTAATAGTAAAGAAGATTGTGcaacaaattcaaataaaggaaaatcatctttaaacataaaaataagttCAAAtagacataaaaatttatcacataaGAACAACAATgaacgaattattattgatgATAATAACGTACAAGATAATAACATACAGGATAGTAATGTACAGGATAATAATGTACAGGAATCCAACAATCTAGTTAAAGAATTTACTTACTATAACTCTGGATTAAAACAGACGTACAATAATCATAGAAATGTAAGGAGATATCAGTACAATGATAGATATAATagagaaggaaatttttataaagaaaagcGACATCATTATCAGAGATATGGCAGAGAGAATTGTGGTAAAGAAGATAGATTTAAAGCGAAAGATCAAACGTGCAGTAGTGAAGAATGTAATGAATACAAAGAATGTTTCAACGAGGAAACTGGGTTAGATGCAAAAGAAGCAATAGAGAAAAGGCACAATTATCAGCGATATAATGCATTTAAGGAACATTACAGaggtaattttgaaaataaactggtaattttgaaagagaaagataaaggGAAATATGtatctgaaaataaagaaaaggagaatGAACATTGGAGAAGTAGGaggaaaattaatgaaagaaatattccaaaacggggacaaaataaaaaatcacttGTTGATAACGATGCAAGTCAGAGAGAAAGACTAGCAGAACAACTGAATAAGGGAGAATTGGAATGCTTAGTATGTTGTGAATGTATTAAACAGAATGATTATACTTGGTCATGCTCCAATTGCTATCacgtgtttcatttaaaatgtattaaaaaatgggCAAACTCATCACAAGCTGAGAATGGTTGGAGATGTCCGGCATGTCAAAATGTTAGCTCAATAATTCCCGACGATTACTTCTGCTTTTGTGGAAAAGTGAGAGCACCTGAATGGAATCGTAGAGATATTGCACATTCTTGCGGCGAAGTTTGTGGTAGAACATTATCGAAAAATGATTGTCCACATAAATGTACTCTTTTGTGTCATCCAGGATCTTGTCCACAATGTACAGCAATGGTAACAAAGTATTGTGGCTGTGGTAGAACTCTACAAACAGTACAATGTAAAACTCATAAATTATTGAAGTGTGATTCTATCTGTGGTAAAGATTTAAATTGTGGTAGACACAAATGTCAAAGTAAATGTCATTATGGAGAATGtgcaaaatgtgaaaaaacAATAGAGCAAGcatGTCATTGtgggaaattttcaaatgtattaatttgtGAGAGTTATATTCCACCTGCATATGCTTGTGAGGTCATTTGTGGGAAATCGTTGGAATGTGGTAATCAcgtttgtacaaaattatgtCATCCGGGAGCTTGCAAACCTTGCTCTTTGACTCCTGGAAAAATTACAACCTGTTGCTGTGGACAAACACCATTACCAGATAAAAGACAAACTTGTTTAGATCCAATTCCTGTCTGTGACCAAGTgtgttcgaaaaatttaaattgtggACAACCTGATGACCCTCATAATTGTAAAGTAAAATGTCACGTAGGAGATTGTCCTGTTTGCGATTTAACCACCAATGTTAAGTGTCGTTGTGGAAACATGGATAAAGAAATAGCTTGTAAAGATTTGGTATCAAAAGCTGATGTACGATGCGAAAAGAAATGTTCAAAGAAAAAATCCTGCGGCAAACACAAATGTAACAAACGATGTTGTGTAGAAACAGAACATACTTGTCCAGTAATCTGTTCGAAAACGCTGAGCTGTGGAAAGCATCAATGCGGACGAAATTGTCATAAAGGAAGATGTCAACCTTGTTGGCGAACTAGTTTTTACGAATTACGCTGCGAATGCGGAGCTTCTGTGGTGTATCCTCCTGTTCCTTGTGGAACAAGAAGACCTACGTGTGACAAACCATGCTCCCGTCAGCATTCTTGTGGCCACGAAGTATTGCATAATTGCCATAGTGAACCAAATTGTCCACCTTGCACTGTCCTTACTCAAAGATGGTGTCACGGCAAGCACGAGTTACGTAAAGCTGTACCATGTTATGTTGACGAAATTTCATGTGGCTTGCCATGTAACAAGCCCATATCTTGCGGTCGACATAAATGTATTACTACTTGTCATTCCGGACCGTGTGAAAAACCGGGCCAACAGTGTACTCAACCTTGCACCGTTCAAAGAGAAATGTGTGGACATATCTGTGCTGCCCCGTGCCACGAGGGTAAATGTCCAGATACACCTTGCAAGGAAATGGTTAAgGTGACGTGTCAGTGTGGGCATAGGACCATGTCACGTGTTTGTGctgaaaattccaaagaatATCAAAGAATAGCAAGCAGTATATTAGCCAGTAAAATGGCTGATATGCAATTAGGTCATTCCTTTAATTTGGAAGAAGTATTCGGCCAAGGAGTAAAGAAGCAGAATCAGTTAAAAACTTTAGACTGCAACGACGAATGCAAAATAATAGAACGAAATAGGAGATTAGCGTTGGGTTTGCAAATTGCAAATCCGGATTTAAGTGGCAAATTAATGCCTAGATACAGTGATTTTATGAAACAGTGGGCTAAAAAGGATCCGCATTTTTGCCAAATGGTCCACGAGAAATTAACGGAATTAGTTCAACTAGCAAAGACCTCTAAGCAAAAATCACGCAGTTATTCCTTTGATAGTATGAATAAAGATAAACGTCATTTTATTCATGAATCTTGTGAACATTTCGGTTGTGAAAGTCAAGCATATGATCAAGAGCCAAAAAGAAATGTTGTTGCAACTGCTGTTAAAGATAAGtgtTGGTTACCTAGCTATAGTTTATTAGAAATTGTGCAACGGGAGAATGGCCAGAGAAAAGTTCCAGGTCCAATGTTAAATACTACAAAAACTGATGGATCTGTAAAGACAATATTATCACTGCCTGcgaagaaattccaaaaatcaGAAACGCCATCAACCATAAAGACATCAGAACCAGAAATagattattttgattataaagGCTAA
Protein Sequence: MATWDGSYLGPDDEDYYQMYADQNAPGPASGNWALFSDNMSHDYLQPKREFYVQNERMFEQNRPSTFYHSNVNVMPNLVATAASYEYVTNPMNTHALNSQEYYPHVTKPEQCYLSNAPWNCDNDLEDNRDKYDRTKRIKEPSDSIMSHSKLHVMAEEFVPNNREYDDRSKNESQNVKCINNTNSCVQDSNKIVPDKYFSCNMNRHDKKYNSKKSPNGKHKEDQCYKKYAYTNYYQQHVRAHKLQGNKYFVNKHYSENSQVSPKCANENASDERPMNNDVACNSKEDCATNSNKGKSSLNIKISSNRHKNLSHKNNNERIIIDDNNVQDNNIQDSNVQDNNVQESNNLVKEFTYYNSGLKQTYNNHRNVRRYQYNDRYNREGNFYKEKRHHYQRYGRENCGKEDRFKAKDQTCSSEECNEYKECFNEETGLDAKEAIEKRHNYQRYNAFKEHYRGNFENKLVILKEKDKGKYVSENKEKENEHWRSRRKINERNIPKRGQNKKSLVDNDASQRERLAEQLNKGELECLVCCECIKQNDYTWSCSNCYHVFHLKCIKKWANSSQAENGWRCPACQNVSSIIPDDYFCFCGKVRAPEWNRRDIAHSCGEVCGRTLSKNDCPHKCTLLCHPGSCPQCTAMVTKYCGCGRTLQTVQCKTHKLLKCDSICGKDLNCGRHKCQSKCHYGECAKCEKTIEQACHCGKFSNVLICESYIPPAYACEVICGKSLECGNHVCTKLCHPGACKPCSLTPGKITTCCCGQTPLPDKRQTCLDPIPVCDQVCSKNLNCGQPDDPHNCKVKCHVGDCPVCDLTTNVKCRCGNMDKEIACKDLVSKADVRCEKKCSKKKSCGKHKCNKRCCVETEHTCPVICSKTLSCGKHQCGRNCHKGRCQPCWRTSFYELRCECGASVVYPPVPCGTRRPTCDKPCSRQHSCGHEVLHNCHSEPNCPPCTVLTQRWCHGKHELRKAVPCYVDEISCGLPCNKPISCGRHKCITTCHSGPCEKPGQQCTQPCTVQREMCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCAENSKEYQRIASSILASKMADMQLGHSFNLEEVFGQGVKKQNQLKTLDCNDECKIIERNRRLALGLQIANPDLSGKLMPRYSDFMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNKDKRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTTKTDGSVKTILSLPAKKFQKSETPSTIKTSEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01418699;
90% Identity: iTF_00983329;
80% Identity: -