Mbee012194.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melipona beecheii
Gene Symbol
-
Assembly
GCA_032399605.1
Location
JAUCMO010000501.1:8248961-8258623[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 1.7e-05 0.0014 19.1 0.9 1 23 216 238 216 238 0.98
2 30 0.0094 0.77 10.5 3.7 1 23 261 284 261 284 0.96
3 30 0.00014 0.012 16.2 0.5 2 23 291 313 290 313 0.96
4 30 0.068 5.6 7.7 0.1 1 19 334 352 334 353 0.96
5 30 0.012 1 10.1 0.2 2 23 426 447 425 447 0.96
6 30 0.015 1.2 9.8 1.2 2 23 454 476 453 476 0.91
7 30 0.00012 0.01 16.4 0.1 1 23 542 565 542 565 0.96
8 30 0.025 2 9.1 0.4 1 23 571 594 571 594 0.96
9 30 0.064 5.3 7.8 0.8 1 23 607 629 607 629 0.97
10 30 3.7e-05 0.003 18.0 0.9 3 23 673 694 672 694 0.96
11 30 0.0013 0.11 13.1 0.9 2 23 754 777 753 777 0.95
12 30 3.2 2.7e+02 2.5 0.0 2 23 786 808 786 808 0.84
13 30 0.013 1.1 10.0 0.2 2 23 815 837 814 837 0.95
14 30 1.4e-05 0.0011 19.4 1.2 1 23 845 867 845 867 0.98
15 30 1.1 86 4.0 0.8 3 23 895 917 893 917 0.83
16 30 0.00022 0.018 15.6 3.3 1 23 920 943 920 943 0.97
17 30 0.00065 0.054 14.1 0.6 2 23 950 972 949 972 0.96
18 30 0.00095 0.078 13.6 3.9 1 21 996 1016 996 1017 0.95
19 30 0.0028 0.23 12.1 1.8 2 23 1031 1052 1030 1053 0.93
20 30 0.46 38 5.1 1.4 1 23 1056 1079 1056 1079 0.94
21 30 0.027 2.3 9.0 1.3 2 23 1086 1109 1085 1109 0.92
22 30 3.2 2.6e+02 2.5 0.2 2 23 1117 1139 1117 1139 0.94
23 30 9.7 8e+02 1.0 0.0 2 23 1146 1168 1145 1168 0.88
24 30 0.24 19 6.1 2.7 2 23 1177 1199 1177 1199 0.96
25 30 1.8 1.5e+02 3.3 0.1 2 23 1205 1227 1205 1227 0.95
26 30 5.9e-05 0.0049 17.4 0.2 1 23 1290 1313 1290 1313 0.96
27 30 0.052 4.2 8.1 3.4 1 21 1338 1358 1338 1359 0.93
28 30 0.3 24 5.7 1.3 2 23 1450 1472 1449 1472 0.94
29 30 0.71 58 4.6 0.3 2 23 1479 1501 1478 1501 0.94
30 30 5 4.1e+02 1.9 2.6 1 23 1512 1534 1512 1534 0.92

Sequence Information

Coding Sequence
ATGGAGCCCAAGGAACGCTACCAGGAGCTCTGTCGACTTTGCGCATCCTACGACGCCGTCAAGATGGACATCTTCGGCCAAGAGGGCAAGAGCAGACAGCTCGTTGACAAGATACAAGCCTGTCTACCGTTTAAGattGCAGAAAATGATCGACTACCAAAATGCCTGTGTTATAGGTGTATGtacaatttggaaaatttctatgattttAGAACAGCATGTGTTAATGCAGTTGCTCTCTTGGAAAGATGTTTATCACCTTTAGGAccgaatGGAGATGTTACTACCATCTTGACATGTAATGATTCAGAGTTCTTTAAAGGAAGGAAAAGTATACCAGTTCTTATTCCAGAAGCTCCTATTGTAAATCCAAATGCTGCTTTAGGCACACCACCCAGATTAAATTCTGATGGAGAGGCTGACCATGAGATagaagaaattgataataGTGGCACAGATGAAGCAACAATCATGGATGATTCCGAAGATCATCATTCAGAGGAATATGAAATGGATATGGAAACAAATCCTAGTGATTTTTTGGAAATGACTTCAATAGTTACAGAAGAACCTGAAGAATCAGAATTGAAACATCAGGATATTTCCAGTAACTTACCAGAGcACACATCTCAACAACATGAAGTTTATGTTTGTTCTTTGTGCAGCAAAGCATTTAGTTCAAAAGGTCATTTGTCTTTACATGCACGCATTCACGTTGGTGCGGGTGACGTGATTGGCGAAAAAGTTCTTACAGATGATCATACATCATATAAAAGGCCCTATCAATGCGATCTTTGTCATAAATCTTATTCCACTGCAAAACATCGTTGGGGTCATGTTTCTACAACTCATAGAGGTCATCCAGCAGTGACATGCGGTTATTGTTCTCGGATTTACTCAACTCGAACAAATTTGGAAGAACATATAAAATCACGTCACGCTGGTCTTCCACCACCTACAGAGATTTCACTGAATAATGTCTATCAGccggaaaataaatatcagtgCAGTGCTTGTGGGAAGATTTGCATAGATGCCATGGAACTGAATCTTCATGTTCCGAAGCTTCAAGTATTGGAAGTGATGATGATGGCAAAGATTATAGAAGTGCGGAAGCTaaattggcaaaaaaatcctcagttaacaattttaaaacaagCATTAACAAAGGGAGATAGTCTTAAGCGAGATTTTGAAGataaatttacttcaaattGCAAACcaaaaaaattgccaaaaaCAGaGCATTGTGATTTTCAAAATACTAAGAAATGGTATTGCGAATCTTGCCCTCAGTGTTTTATTTCAGTTGAGGATTTAAGAGAGCATGAAGCAACTCATTTTACGGATAAAccatttatttgtattttgtgtAAAAAAGACTTTTTCCTTAAATCTTCCTTAAGCAGGCATATTCAAACCTTACATGGAGTTGATCCATGCCCTATAATAGAAAGTGATAAGTGTTTAAAGAAAGTTGTTTCACGTAATTGGAATGAATCCATGGATATTGATTCGTATGAGggtaaaatttctgaatttccaCTGTCTCCAGagataaatgtagaaaatgaagaagaccATGAGAGTGGGCAAGAAAATCTtatcgaaattgaaactgtATTTGTTTGTGAAATTTGTACTCGTGATTTTAATGATCGTGCATCCCTCTGGCTTCATATTCGTGCTACACATAAGGAATTTGCAGCATTTGCATGTGgtgtttgtttgaaaatttgtgcAGACAATACTCAACTTTTGAACCATGTAAACATGTATCACGGTGGTTCAAAATTACTGCTTTCTGAACAAAGAAGGTACAGTTGTACTATTTGTGGTAGACAACAtgattcgagaaaaaaattaattgcccATGTATCTATACATAATGTAGATCCAAATTATGATCCTGCTacttttgttcaattaaatagtaattattacGGAGAGAATATTAATGGTAATGAAACAGCAGAACAAATGCTCGACTATGAAGAAGATGGAGATAAAGTGgattgttatatttgttataaatcaTTTCCTAATGAAGATCATTTGATACGACATCAAAGAAATGCACATAgatCGGAACAACTAATGCCAACAGGAGATCCtttaaattcgtcgaatttaaaTGGTGGCGGAAATAGAGCTCAATAtcatcttttctttgtttgtgAACTTTGTGGGAGTTCACATCATAGTAAATGGGAACGTTGGCTACACGTTAGCTCATCTCATAGCAATGAATCAGCCATAAAATGTGATCGTGAAGACTGTGGTAAAATTTTTGCTACAAAATCTCTTAGAAATGAACATATTCAACATCACGCAATTCAAGGTTCATCCCCAAATACTTGTGAAATCTGCGGTAAACTTTGGGGCAGTAGAGTTGATTATTGGAAGCATGTTATGGGTGTACATTCGGATACCGTTCCATTAATTTGTGGCGTTTGTTTAAAAGTATTCTCAAATGTTTTGCAATTAAGTACTCATGTAAGATCGAAACATTGGCCGTTAACGAATGGTGATTTTAGTTGTGATATTTGTGGTAGACCATATTCGAATAAATCCAAAATGTCTAGACACAGAAAAATCCATGGTTTTGAAGAAAGCTGTGACAACGGGacagaaaatttcgagaataaaatcGATGGAAGAATGAGAGAAACAGAACTAAGTTGTGAGCTTTGTgcagatttgaaatttactaGCTTAGAAAAATTGTGTAATCATAGACGAATCGTTCATGGACTTTTTCCTTGTGATCTCTGTAATAAATGCTATGGCAGAACTTCGCATTTATGGAAACATGTGAACAGAGTTCACAAAGGCCATGAAGATGTAACTTGTCCTTATTGTTTGAAAACTAGTGCTTCGAAAGATCATTTAGCAACtcacatttcaaaaattcatagaTACGAACCAGATTCTAGAAAAGATGGAAAAGATAGTAGACAATTTAAAACCGAAGAAGTTAGTTTACATTattgtgaaaaatgtaataaaggATTTCACAAGCGGTATCTTTTACGTAGACACATGAAAGGATGTCAGAATTATAGAAAAGATCCTGGGGCATTATTAACAAGATGCAGAGCTTGCGAAAGGATATTTAAAGATCGTGCGAGTTTACAAAAGCATATTGAGAATCATCATAGTACATACACATGTCATCTTTGTAATGAGACGATTACTTCAAAATTAGGAATTATGACACATAACAGAGTGAAACATATGGATCATCCAGATTTAACTTGTAATTTTGGGTCTTGTAGGAAATTATTCAGAACTAAAGAAGATTTGGAATCTCATAGAAAAGATCACAGATATCATACAACTCCCAACGTTTGTGATTTCTGCGGTGATAcggttgaaaataaattgaaattaaagatgCACGTTTTGTCTCTTCATCGCAATGAAATTGGTGTATCTTGTGGAGTATGTTTAATTCCAATGAAAGATCCGAAAGAACTTAAAAGTCACGTAGAAGAAGTTCATTCTAGTGTGCTTTCAAAACCTAATACATGTCAAGTTTGTGGGAAACAATATGCTTCAAAATGGAAAGCTTTTGATCATACTAAAAAGTGTCATGGAAAAGTATTTAGGACTTGTAAACAGTGTTTAGCTGTTTTCACTGAAGATTCTGCGATTAGAGATCATTATGAAACAATACATAATATCCCCAAAGATCAGCTCGCATTATTCGAGCATAGATTAGATATTGGGtcaaaaaatgaagatttcGAAATAGAGTCTCCTGATGTAATAGTTAAAGAAGAACCAGAGGATTTAGAATATGAAGTAGATATATGTGATGAAGATTCTAGtgattcaaaaagaagaagatctTTAACTGATACTTACGATTGTGAAATGTGTCCAGAAATGTTTGTGAACAGTGATGCACTTTCAAAACATTATCGTAATATGCACAATATAGATCCACAGAGAATATTTAAGAGATTGAAACAGGATGAACAGAGAAAAATGCGTagcaaaatgaatttcttttgtaaaaattgtaggAGACAATTTTGTACTAAAACATTATATTGGAATCATATTGCAACTTGTagaaaaaatgtacgaaaaggCGAAGAACGAAATGATATGTTAAATAatcaagaatttttgaaaaataataatcaaattaaaaaagaggAGCCCACatcaaatttgaatattcCTGATTTCAATCTCTTTGAAGATATAAATCTTCAACTCTCAGGTCAGAGACCTCTTCCAAATCTTATGCCACTGAATCAGAGAACAAAATCTTCAATGAAATGTTCAAGAAAGGATTCTAGGAAAGTTTATGATGAATCAACAAATACAGAATGTGTTTGTGAAGTATGTGGAAAACAATGGCCTGCAAAAAAACATTTATGGCAACATCTAATTCGTTTCCATCGAGCGGAAGCAGCAGTCACTTGTGGAGTATGTCTAAAACTTTGCAAAGACTATAATGATTTGGCAGAACATTTGAAAGCTGCACACGAAGCAATCCTTTCTACTGAAGGAAAcaattttacatgtaaaacTTGTGGCAGATATCACAATGCTCGTagtaaattgttattacataCGAGTATTCATATCGGCCATCCAGGTACTAGTACTTGGTGTCCAAAATGTCGGAAAAATATTACCGACGAAACTGCACATTTAACTACTTGTAATACGAAAACGGAAGAAGGAGAACAATTGAAAAGTAGTGAAAAAGCAGAAgGAAGTTTAATAGCGGATGACGCGATGATTGAAGAAGTGGAAGAAGGAGATTTTGAATccgaagcagaagaagaagcagaaacaGAAGAATCGGAAAGTGGTAGTAGTACCGAGGTTGAAGAGGAACATGAGTCAGAGGATGAATCTAGAGTAACTGGAGATATTACTTACAACTCAGAGAGTGAAGATTCAGAAGAACTggataatttagaaattgatgaaaagaaTATGGAGCATTATGCCTTAAAACACCTTCAAGAATCTAAAAATACAgAAAAACAGAATTCGAATTTGTCAGATGATGATGAACCTCCAGTTCTCAGTCCCATGATGCCTTTGCTTTCTGAGAATATGTCTGAACAATCGATGGGTCATAAACTAAGTTCTATAGTGCCTCTAACTGGGAAAGGAATGGGAATATGTGATTTATCAGAGATTCGAAATGGATCCTCTCCAAAATCTGtgaatttatatgaaaaacaCTTACCTAATAATGAATCTTTAGAGCTTGAATCTGAAACATTTGCGAATCAAAGCGATGAAGATTTTGAGGAtacgaaaaatgaatttgatgGAAACTCTACCGAAGAAAATGATGAAGAAAATGAGGATAATGAGGAGATtgaagaaaatgatgaaatggaattaaatgAAGTGATAGAAGAAGTTGACGAGAATGAAGAAATTGAGAGAAATGAGGATAGTGAACAGATTGAAGATAATGACGGTAATgaaggaaatgaagaaaatgaagaaaatgaagagaatgaagagaatgaagaaaatgaaggGAATGGAGATATTGAAGAAATGGAAGAGattgaaagaaatggaagTATTGATGAGTCaggcgaagaagaagaaaatgatgaaagagaggaaaacaTGCAATTGGATGATTTAGAAGGTGCTGTTTTAATGGTGGCTGAAGGTGATCAGATATTGATTCAACAAGAAATATTGGaggacgaaaatgaaaattcaaatcaagAATATGTTTATTCTGCGCTCAGATACAGTTCAGAGGAAGACAGTGACGATACAAGGAAATGA
Protein Sequence
MEPKERYQELCRLCASYDAVKMDIFGQEGKSRQLVDKIQACLPFKIAENDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLSPLGPNGDVTTILTCNDSEFFKGRKSIPVLIPEAPIVNPNAALGTPPRLNSDGEADHEIEEIDNSGTDEATIMDDSEDHHSEEYEMDMETNPSDFLEMTSIVTEEPEESELKHQDISSNLPEHTSQQHEVYVCSLCSKAFSSKGHLSLHARIHVGAGDVIGEKVLTDDHTSYKRPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPPPTEISLNNVYQPENKYQCSACGKICIDAMELNLHVPKLQVLEVMMMAKIIEVRKLNWQKNPQLTILKQALTKGDSLKRDFEDKFTSNCKPKKLPKTEHCDFQNTKKWYCESCPQCFISVEDLREHEATHFTDKPFICILCKKDFFLKSSLSRHIQTLHGVDPCPIIESDKCLKKVVSRNWNESMDIDSYEGKISEFPLSPEINVENEEDHESGQENLIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICADNTQLLNHVNMYHGGSKLLLSEQRRYSCTICGRQHDSRKKLIAHVSIHNVDPNYDPATFVQLNSNYYGENINGNETAEQMLDYEEDGDKVDCYICYKSFPNEDHLIRHQRNAHRSEQLMPTGDPLNSSNLNGGGNRAQYHLFFVCELCGSSHHSKWERWLHVSSSHSNESAIKCDREDCGKIFATKSLRNEHIQHHAIQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFSNVLQLSTHVRSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGFEESCDNGTENFENKIDGRMRETELSCELCADLKFTSLEKLCNHRRIVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCPYCLKTSASKDHLATHISKIHRYEPDSRKDGKDSRQFKTEEVSLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVKHMDHPDLTCNFGSCRKLFRTKEDLESHRKDHRYHTTPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKELKSHVEEVHSSVLSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTEDSAIRDHYETIHNIPKDQLALFEHRLDIGSKNEDFEIESPDVIVKEEPEDLEYEVDICDEDSSDSKRRRSLTDTYDCEMCPEMFVNSDALSKHYRNMHNIDPQRIFKRLKQDEQRKMRSKMNFFCKNCRRQFCTKTLYWNHIATCRKNVRKGEERNDMLNNQEFLKNNNQIKKEEPTSNLNIPDFNLFEDINLQLSGQRPLPNLMPLNQRTKSSMKCSRKDSRKVYDESTNTECVCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKDYNDLAEHLKAAHEAILSTEGNNFTCKTCGRYHNARSKLLLHTSIHIGHPGTSTWCPKCRKNITDETAHLTTCNTKTEEGEQLKSSEKAEGSLIADDAMIEEVEEGDFESEAEEEAETEESESGSSTEVEEEHESEDESRVTGDITYNSESEDSEELDNLEIDEKNMEHYALKHLQESKNTEKQNSNLSDDDEPPVLSPMMPLLSENMSEQSMGHKLSSIVPLTGKGMGICDLSEIRNGSSPKSVNLYEKHLPNNESLELESETFANQSDEDFEDTKNEFDGNSTEENDEENEDNEEIEENDEMELNEVIEEVDENEEIERNEDSEQIEDNDGNEGNEENEENEENEENEENEGNGDIEEMEEIERNGSIDESGEEEENDEREENMQLDDLEGAVLMVAEGDQILIQQEILEDENENSNQEYVYSALRYSSEEDSDDTRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00218574;
90% Identity
iTF_00983113; iTF_00983730; iTF_01417853; iTF_00734081; iTF_00873933;
80% Identity
-