Mqua013897.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melipona quadrifasciata
Gene Symbol
-
Assembly
GCA_001276565.1
Location
KQ435756.1:1606692-1617019[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 1.2e-05 0.001 19.1 0.9 1 23 226 248 226 248 0.98
2 28 0.0066 0.56 10.4 3.7 1 23 271 294 271 294 0.96
3 28 9.8e-05 0.0083 16.2 0.5 2 23 301 323 300 323 0.96
4 28 0.021 1.8 8.9 0.0 1 21 344 364 344 365 0.94
5 28 0.011 0.9 9.8 1.2 2 23 485 507 484 507 0.91
6 28 8.6e-05 0.0073 16.4 0.1 1 23 573 596 573 596 0.96
7 28 0.017 1.5 9.1 0.4 1 23 602 625 602 625 0.96
8 28 0.045 3.8 7.8 0.8 1 23 638 660 638 660 0.97
9 28 2.6e-05 0.0022 18.0 0.9 3 23 704 725 703 725 0.96
10 28 0.00092 0.079 13.1 0.9 2 23 785 808 784 808 0.95
11 28 2.3 1.9e+02 2.5 0.0 2 23 817 839 817 839 0.84
12 28 0.029 2.4 8.4 0.1 2 23 846 868 845 868 0.95
13 28 9.5e-06 0.0008 19.4 1.2 1 23 876 898 876 898 0.98
14 28 0.73 63 4.0 0.8 3 23 926 948 924 948 0.83
15 28 0.00015 0.013 15.6 3.3 1 23 951 974 951 974 0.97
16 28 0.00046 0.039 14.1 0.6 2 23 981 1003 980 1003 0.96
17 28 0.00066 0.057 13.6 3.9 1 21 1027 1047 1027 1048 0.95
18 28 0.002 0.17 12.1 1.8 2 23 1062 1083 1061 1084 0.93
19 28 0.32 27 5.1 1.4 1 23 1087 1110 1087 1110 0.94
20 28 0.019 1.6 9.0 1.3 2 23 1117 1140 1116 1140 0.92
21 28 2.2 1.9e+02 2.5 0.2 2 23 1148 1170 1148 1170 0.94
22 28 6.8 5.8e+02 1.0 0.0 2 23 1177 1199 1176 1199 0.88
23 28 0.16 14 6.0 2.7 2 23 1208 1230 1208 1230 0.96
24 28 1.3 1.1e+02 3.3 0.1 2 23 1236 1258 1236 1258 0.95
25 28 3.9e-05 0.0033 17.5 0.4 1 23 1321 1344 1321 1344 0.96
26 28 0.036 3.1 8.1 3.4 1 21 1369 1389 1369 1390 0.93
27 28 0.21 18 5.7 1.3 2 23 1481 1503 1480 1503 0.94
28 28 0.5 42 4.5 0.3 2 23 1510 1532 1509 1532 0.94

Sequence Information

Coding Sequence
ATGCCGACGATGGAGCCCAAGGAACGCTACCAGGAGCTCTGTCGACTTTGCGCATCCTACGACGCCGTCAAGATGGACATCTTCGGCCAAGAGGGCAAGAGCAGACAGCTCGTTGACAAGATACAAGCCTGTCTGCCGTTTAAGttAGCCTGTGTTGATTGTATTTTAATGACTATATCATTTAattcatcaaatttattaattaaGTGTATgtacaatttggaaaatttctatgattttAGAACAGCATGTGTTAATGCAGTTGCTCTTTTGGAAAGATGTTTATCACCTTTAGGAccgaatGGAGATGTTACTACCATCTTGACATGTAATGATTCAGACTTCTTTAAAGGAAGGAAAAGTATACCAGTCCTTATTCCAGAAGCTCCTATTGTAAATCCAAATGCTGCTTTAGGCACACCACCCAGATTAAATTCTGATGGAGAGGCTGACCATGAGATagaagaaattgataataGTGGCACAGATGAAGCAACAATCATGGATGATTCCGAAGATCATCATTCAGAGGAGTATGAAATGGATATGGAAACAAATCCTAGTGATTTTTTGGAAATGACTTCAATAGTTACAGAAGAACCTGAAGAATCAGAATTGAAACATCAGGATATTTCCAGTAACTTACCAGAGcACACATCTCAACAACATGAAGTTTATGTTTGTTCTTTGTGCAGCAAAGCATTTAGTTCAAAAGGTCATTTGTCTTTACATGCACGCATTCACGTTGGTGCGGGTGACGTGATTGGCGAAAAAGTTCTTACAGATGATCATACATCATATAAAAGGCCCTATCAATGTGATCTTTGTCATAAATCTTATTCCACTGCAAAACATCGTTGGGGTCATGTTTCTACAACTCATAGAGGTCATCCAGCAGTGACATGCGGTTATTGTTCTCGGATTTACTCAACTCGAACAAATTTGGAAGAACATATAAAATCACGTCACGCTGGTCTTCCAGCACCTACAGAGATTTCACTGAATAATGTCTATCAAccggaaaataaatatcagtgCAGTGCTTGTGGGAAGATTTGCATAGATGCCATGGAACTGAATCTTCATGGTAGAATTTGTACTGAAGGACAAAAATTAGATCTTCCAGGAAAAAACGAGATTAGgggtaataaaattgtagataGTTCCGAAGCTTCAAGTATTGGAAGTGATGATGATGGCAAAGATTATAGAAGTGCGGAAGCTAAATTGGCAAAAAATCCTCagttaacaattttaaaacaagcATTAACAAAGGGAGATAGTCTTAAGCGAGATTTTGAAGataaatttacttcaaattGTAAACcaaaaaaattgccaaaaacAGaGCATTgtgattttcaaaatactaAGAAATGGTATTGCGAATCTTGCTCTCAGTTTGAGGATTTAAGAGAGCATGAAGCAACTCATTTTACGGATAAaccatttatttgtattttgtgtAAAAAAGACTTTTTCCTTAAATCTTCCTTAAGCAGGCATATTCAAACCTTACATGGAGTTGATCCATGCCCTATAATAGAAAGTGATAAGTGTTTAAAGAAAGTTGTTTCACGTAATTGGAATGAATCTATGGACATTGATTCGTATGAGggtaaaatttctgaatttccaCTGTCTCCAgagataaatgtagaaaatgaagaagaccATGAGAGTGGGCAAGAAAAtcttattgaaattgaaactgtatttgtttgtgaaatttgtaCTCGTGATTTTAATGATCGTGCATCCCTCTGGCTTCATATTCGTGCTACACATAAAGAATTTGCAGCATTTGCATGTGgtgtttgtttgaaaatttgtgcAGACAATACTCAACTTTTGAATCATGTAAACATGTATCACGGTGGTTCAAAATTACTGCTTTCTGAACAAAGAAGGTACAGTTGTACTATTTGTGGTAGACAACAtgattcgagaaaaaaattaattgcccATGTATCCATACATAACGTAGATCCAAATTATGATCCTGCTacttttgttcaattaaatagtaattattacGGAGAGAATATTAATGGTAATGAAACAGCAGAACAAATGCTCGACTATGAAGAAGATGGAGATAAAGTGgattgttatatttgttataaatcaTTTCCTAATGAAGATCATTTGATACGACATCAAAGAAATGCACATAGatCGGAACAACTAATGCCAACAGGAGATCCTTTAAATCCGTCGAATTTAAATGGTGGCGGAAATAGAGCTCAATAtcatcttttctttgtttgtgAACTTTGTGGGAGTTCACATCATAGTAAATGGGAACGTTGGCTACATGTTAGCTCATCTCATAGCAATGAATCAACCATAAAATGTGATCGTGAAGACTGTGGTAAAATTTTTGCTACAAAATCTCTTAGAAATGAACATATTCAACATCACGCAATTCAAGGTTCATCCCCAAATACTTGTGAAATCTGCGGTAAACTTTGGGGCAGTAGAGTTGATTATTGGAAGCATGTTATGGGCGTACATTCAGATACCGTTCCATTAATTTGTGGCGTCTGTTTAAAAGTGTTCCCAAATGTTTTGCAATTAAGTACTCATGTAAGATCGAAACATTGGCCGTTAACGAGTGGTGATTTTAGTTGTGATATTTGTGGTAGACCATATTCGAATAAATCCAAAATGTCTAGACACAGAAAAATCCATGGTTTTGAAGAAAGCTGTGACAACGGGacagaaaatttcgagaataaaatcGACGGAAGAATGAGAGAAACAGAACTAAGTTGTGAGCTCTGTgcagatttgaaatttactagCTTAGAAAAATTGTGTAATCATAGACGAATCGTTCATGGACTTTTTCCTTGTGATCTCTGTAATAAATGCTATGGCAGAACTTCGCATTTATGGAAACATGTGAACAGAGTTCACAAAGGCCATGAAGATGTAACTTGTCCTTATTGTTTGAAAACTAGTGCTTCGAAAGATCATTTAGCAACtcacatttcaaaaattcatagaTACGAACCAGATTCTAGAAAAGATGGAAAAGATAGTAGACAATTTAAAACCGAAGAAGTTAGTTTACATTAttgtgaaaaatgtaataaaggATTTCACAAACGGTATCTTTTACGTAGACACATGAAAGGATGTCAGAATTATAGAAAAGATCCTGGGGCATTATTAACAAGATGCAGAGCTTGCGAAAGGATATTTAAAGATCGTGCCAGTTTACAAAAGCATATTGAGAATCATCATAGTACATACACATGTCATCTTTGTAATGAGACGATTACTTCAAAATTAGGAATTATGACACATAACAGAGTGAAACATATGGATCATCCAGATTTAACTTGTAATTTTGGATCTTGTAGGAAATTATTTAGAACTAAAGAAGATTTGGAATCTCATAGAAAAGATCACAGATATCATACAACTCCCAACGTTTGTGATTTCTGCGGTGATAcggttgaaaataaattgaaattaaagatgCACGTTTTGTCTCTTCATCGCAATGAAATTGGTGTATCTTGTGGAGTATGTTTAATTCCAATGAAAGATCCGAAAGAACTTAAAAGTCACGTAGAAGAAGTTCATTCTAGTGTGCTTTCAAAACCTAATACATGTCAAGTTTGTGGGAAACAATATGCTTCAAAATGGAAAGCTTTTGATCATACTAAAAAGTGTCATGGAAAAGTATTTAGGACTTGTAAACAGTGTTTAGCTGTTTTCACTGAAGATTCTGCGATTAGAGATCATTATGAAACAATACATAATATCCCCAAAGATCAGCTCGCATTATTCGAGCATAGATTAGATATTGGGTCAAAAAATGAGGATTTCGAAATAGAGTCTCCTGATGTAATAGTTAAAGAAGAACCAGAGGATTTAGAGTATGAAGTAGATATGTGTGATGAAGATTCTAGtgattcaaaaagaagaagatctTTAACTGATACTTACGATTGTGAAATGTGTCCAGAAATGTTTGTGAATAGTGATACACTTTCAAAACATTATCGTAATATGCACAATATAGATCCAGAGAGAATATTTAAGAGATTAAAACAGGATGAACAGAGAAAAATGCGTagcaaaatgaatttcttttgtaaaaattgtaggAGACAATTTTGTACTAAAACATTATATTGGAATCATATTGCAACTTGTagaaaaaatgtacgaaaaggCgaagaacgaaacgatatgttaaataatcaagaatttttgaaaaataataatcaaattaaaaaagaggAACCCACatcaaatttgaatattccTGATTTCAATCTCTTTGAAGATATAAATCTTCAACTCTCAGGACAGAGACCTCTTCCAAATCTTATGCCACTGAATCAGAGAACAAAATCTTCAATGAAATGTTCAAGAAAGGATTCTAGGAAAGTTTATGATGAATCAACAAATACAGAATGTGTTTGTGAAGTATGTGGAAAACAATGGCCTGCAAAGAAACATTTATGGCAACATCTAATTCGTTTCCATCGAGCGGAAGCAGCAGTCACTTGTGGAGTATGTCTAAAACTTTGCAAAGACTATAATGATTTGGCAGAACATTTGAAAGCTGCACACGAAGCAATCCTTTCTACCGaaggaaacaattttacatGTACTAGTACTTGGTGTCCAAAATGTCGGAAAAATATTACCGACGAAACTGCACATTTAACTACTTGTAATACGAAAACGGAAGAAGGAGAACAATTGAAAAGCAATGAAAAAGCAGAAGTACCGGATGACGCGATGATTGAAGAAGTGGAAGAAGGAGATTTTGAATCcgaagcagaagaagaagcagaaacaGAAGAATCGGAAAGTGGTAGTAGTACCGAGGTTGAAGAGGAACATGAGTCAGAGGATGAATCTAGAGTAACTGGAGATATTACTTATATATACAACTCAGAGAGTGAAGATTCAGAAGAACTggataatttagaaattgatgaaaagaaTATGGAGCATTATGCCTTAAAACACCTTCAAGAATCTAAAAATACAgaaaaacagaaacatGATGCGAATTTGTCAGATGATGATGAACCTCCAGTTCTCAGTCCCATGATGCCTTTGCTTTCTGAGAATATGTCTGAACAATCGTTGGGTCATAAACTAAGTTCTATAGTGCCTCTAACTGGGAAAGGAATAGGAATATGTGATTTATCAGAGATTCGAAATGGATCCTCTCCAAAATCTGTGAATCTATATGAAAAACACTTACCTAATAATGAATCTTTAGAGCTTGAATCTGAAACATTTGCGAATCAAAGCGATGAAGATTTTGAGGATgcgaaaaatgaatttgatgGAAACTCTACCGAAGAAAATGATGAAGAAAATGAGGATAATGAGgagattgaagaaaatgatgaaattgaattaaatggAGTGATAGAAGAAGTTGACGAGAATGAAGAAATTGAGAGAAATGAGGATAGTGAACAACAGATTGAAGATAATGACGGTAATGAAgagaatgaagaaaatgaagggtatgaagaaaatgaagaaaatgaagaaaatgaagaaaatgaagaaaatgaagggAATGGAGATATTGAAGAAATGGAagagattgaaagaaatggaagTATTGATGAGtcaaacgaagaagaaaatgatgaaaatgatgagagagaggaaaacatGCAATTGGATGATTTAGAAGGTGCTGTTTTAATGGTGGCTGAAGGGGATCAGATATTGATTCAACAAGAAATATTGGaagacgaaaatgaaaattcaaatcaagAATATGTTTATTCTGCGCTCAGATACAGTTCAGAGGAGGACAGTGACGATACAAGGAAATGA
Protein Sequence
MPTMEPKERYQELCRLCASYDAVKMDIFGQEGKSRQLVDKIQACLPFKLACVDCILMTISFNSSNLLIKCMYNLENFYDFRTACVNAVALLERCLSPLGPNGDVTTILTCNDSDFFKGRKSIPVLIPEAPIVNPNAALGTPPRLNSDGEADHEIEEIDNSGTDEATIMDDSEDHHSEEYEMDMETNPSDFLEMTSIVTEEPEESELKHQDISSNLPEHTSQQHEVYVCSLCSKAFSSKGHLSLHARIHVGAGDVIGEKVLTDDHTSYKRPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPAPTEISLNNVYQPENKYQCSACGKICIDAMELNLHGRICTEGQKLDLPGKNEIRGNKIVDSSEASSIGSDDDGKDYRSAEAKLAKNPQLTILKQALTKGDSLKRDFEDKFTSNCKPKKLPKTEHCDFQNTKKWYCESCSQFEDLREHEATHFTDKPFICILCKKDFFLKSSLSRHIQTLHGVDPCPIIESDKCLKKVVSRNWNESMDIDSYEGKISEFPLSPEINVENEEDHESGQENLIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICADNTQLLNHVNMYHGGSKLLLSEQRRYSCTICGRQHDSRKKLIAHVSIHNVDPNYDPATFVQLNSNYYGENINGNETAEQMLDYEEDGDKVDCYICYKSFPNEDHLIRHQRNAHRSEQLMPTGDPLNPSNLNGGGNRAQYHLFFVCELCGSSHHSKWERWLHVSSSHSNESTIKCDREDCGKIFATKSLRNEHIQHHAIQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLSTHVRSKHWPLTSGDFSCDICGRPYSNKSKMSRHRKIHGFEESCDNGTENFENKIDGRMRETELSCELCADLKFTSLEKLCNHRRIVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCPYCLKTSASKDHLATHISKIHRYEPDSRKDGKDSRQFKTEEVSLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVKHMDHPDLTCNFGSCRKLFRTKEDLESHRKDHRYHTTPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKELKSHVEEVHSSVLSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTEDSAIRDHYETIHNIPKDQLALFEHRLDIGSKNEDFEIESPDVIVKEEPEDLEYEVDMCDEDSSDSKRRRSLTDTYDCEMCPEMFVNSDTLSKHYRNMHNIDPERIFKRLKQDEQRKMRSKMNFFCKNCRRQFCTKTLYWNHIATCRKNVRKGEERNDMLNNQEFLKNNNQIKKEEPTSNLNIPDFNLFEDINLQLSGQRPLPNLMPLNQRTKSSMKCSRKDSRKVYDESTNTECVCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKDYNDLAEHLKAAHEAILSTEGNNFTCTSTWCPKCRKNITDETAHLTTCNTKTEEGEQLKSNEKAEVPDDAMIEEVEEGDFESEAEEEAETEESESGSSTEVEEEHESEDESRVTGDITYIYNSESEDSEELDNLEIDEKNMEHYALKHLQESKNTEKQKHDANLSDDDEPPVLSPMMPLLSENMSEQSLGHKLSSIVPLTGKGIGICDLSEIRNGSSPKSVNLYEKHLPNNESLELESETFANQSDEDFEDAKNEFDGNSTEENDEENEDNEEIEENDEIELNGVIEEVDENEEIERNEDSEQQIEDNDGNEENEENEGYEENEENEENEENEENEGNGDIEEMEEIERNGSIDESNEEENDENDEREENMQLDDLEGAVLMVAEGDQILIQQEILEDENENSNQEYVYSALRYSSEEDSDDTRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00218574;
90% Identity
iTF_00982438;
80% Identity
-