Mvio007589.1
Basic Information
- Insect
- Megathymus violae
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_003671415.1
- Location
- PDGT01000028.1:3481447-3505261[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-14 1.8e-11 44.1 0.0 1 38 151 189 151 195 0.93 2 2 1.1e-18 1.1e-15 57.6 0.0 1 43 356 399 356 401 0.95
Sequence Information
- Coding Sequence
- ATGATGTGTCATTTGCTGCAGAGTCCCGCGTCAGAATCGGACAGCAGTTCAGTGTCGGGGGCGAGGAGTCCGGCCGGGGGGCCGCCCCTGCTCCAGCACCTGCTGCAGCTACAGCTCCAACAAGGGCAAAACCCCCAGGCAATCGCACAGTTCCAGCAGATGCTCGCTGCGTTGGCGGCGCTGGGGACCGCGCCGGCGCTCTCGCAGGCCTGGATGATACAGCGGCTGGCGCAGGCGAGGCCGCAACTCGACAGGCTCCCAGACGTGGCGGATAAGGTAACGGCAGCCAGCTCGTCTCCCAGCCTCACGGAGCAGCCACTCGACCTGAGTGCCAAGTCCACCTCCAGCACCAGTGGAACACCACCTCCCGATGCCAAGAATCCTGAAAATTCTAGATTAAAACGAGCCGCTCTCGAAACCGCTAGCAATAGCGCGACCAGACGCGCTTACACCGACGATGAGCTGCAATCAGCCCTGCGGGATATCCAATCCGGCCGGCTCGGCACACGCCGCGCCGCCGTCGTCTATGGGATCCCTCGTTCCACCCTCAGGAACAAGGTCAATAAATTCGGTCTCGCCTCCGAAACGGGCCACGAATCTGATCAGGACAGCGACCCAGAAAGACCGGAATCTCCGCCTTCGGTCATCTTAAAAATACCAACCTTCCCGCCGCCCGACGAAAAAAGTCCGTCGCCGGCGACGCCAGTCACCACACCGGTCACACCGATCACACCCATCTTACCTCAACCGTCTCTTAACCCGTCACAGCTGCTCCTGCCACCCGTCTTCGCCGACCAATCCTCCAGTCAACTCCTGACGTCCCTCAACGACGTCATAGCCAAAAGCATCAGTCAGAAGTTCCAACAGCCCATGGACAGACCACCGCACCTCGGCGACCTGCAGTTCATGAGGCCCGACAGACACGTGTCGGTGATCAAAACTCCGCCCGATAGTCAAAGGAACTACGCAGCGCCCAGCAACTCGAGGGGCACTCCGAACAACAACGGGCAATCTGCGACCGGGGGAAAGGGCACGAGGCCCAAGAGAGGGAAATATAGGAATTACGACCGGGATAGCCTAGTGGAAGCGGTCAAAGCTGTGCAGCGGGGCGAGATGTCTGTGCACCGCGCGGGCTCATACTACGGAGTGCCGCACTCGACGCTAGAATACAAAGTCAAGGAGCGGCATCTGATGCGTCCCAGGAAGAGGGAGCCGAAGCCGCAACAGGACGTAAAACCGCAGCCGCCGAAGCCTCCGCAACCGAAGCCTCCGTCGAAGCCATTCTCGAACGGGCTGAATGGACCGGAGACGCCGAGCTACCCGCCGAGCTACCCATTCTGGCAGACCGGCTTCGCGCCTCCAGCGCCCGATCTATACGCATCGCACATGATGCGGAGGTTGCGCGAGGAGGCACCGCCGCCTGCAAACGGGTCGTTCCTCGAAGGCATCATTCGGTCGAGCTTGGAACGTCCGGGTGCGGCGCTGCTGCAGCGGTTGACGGGAGAGCCGCGACCACTACCGGCGGAGGCACCGAATTTGCTGCGACGGCTGGCCGGGTCTCCCGAGGATTCGCCGCCGGTGCGTCGAGCGCGCATCGATAGTTCAGACCGCGCGCTCGCAGCGGAGATGCGGGAAGCGGTGCAGCGATTGCGAGCGGACAAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCGACGCCCCGCTCGCCGCGCCGCCCGACCGCACCTAGCCCCTACCGATCTCCTCAGTCTTGTGATAATAATGTAA
- Protein Sequence
- MMCHLLQSPASESDSSSVSGARSPAGGPPLLQHLLQLQLQQGQNPQAIAQFQQMLAALAALGTAPALSQAWMIQRLAQARPQLDRLPDVADKVTAASSSPSLTEQPLDLSAKSTSSTSGTPPPDAKNPENSRLKRAALETASNSATRRAYTDDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLASETGHESDQDSDPERPESPPSVILKIPTFPPPDEKSPSPATPVTTPVTPITPILPQPSLNPSQLLLPPVFADQSSSQLLTSLNDVIAKSISQKFQQPMDRPPHLGDLQFMRPDRHVSVIKTPPDSQRNYAAPSNSRGTPNNNGQSATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDVKPQPPKPPQPKPPSKPFSNGLNGPETPSYPPSYPFWQTGFAPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTGEPRPLPAEAPNLLRRLAGSPEDSPPVRRARIDSSDRALAAEMREAVQRLRADKLXXXXXXXXXXXPRRPARRAARPHLAPTDLLSLVIIM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00166850; iTF_00970327; iTF_00287979; iTF_01359637; iTF_01082358; iTF_01437890; iTF_01438819; iTF_00795620;
- 90% Identity
- iTF_00166850;
- 80% Identity
- -