Ssim023063.1
Basic Information
- Insect
- Spicauda simplicius
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949699795.1
- Location
- OX453079.1:3697258-3710212[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-14 1.8e-11 44.3 0.0 1 38 101 139 101 145 0.93 2 2 2.6e-18 1.1e-15 57.8 0.0 1 43 309 352 309 354 0.95
Sequence Information
- Coding Sequence
- ATGAATTCTCTTATCAGGAGACGAGATTTTATGGCTAAGTTCAGCTTGGATAGATTTTGTGAATTAGCCCTTAGACCATCTCTCTCAGAAATGAAAATGCACCTGCTACCAGACGTGGGAGACAAGGTGGCGGCTGCCAGTTCGTCGCCGAGCCTGACGGAGCAGCCGCTAGACCTGAGCGCCAAGTCCACCTCCAGCACCAGCGGGACCCCGCCACCGGACCCCAAGAACTTGGACAACTCTAGATTAAAACGAGCCGCTCTCGAAACTGCCAGCAACAGTGCGACCAGACGCGCGTATACCGACGATGAGCTGCAATCAGCGTTGCGCGACATCCAATCTGGCCGTCTGGGCACCCGGCGCGCCGCCGTCGTCTACGGCATCCCGAGGTCCACTCTTCGGAACAAGGTCAACAAATTCGGCCTTGCCTCCGAAACGGGCCACGAATCCGACCAGGACAGCGACCCGGACAGACCTGAGTCACCGCCCTCTGTCATCTTAAAAATACCCACCTTCCCGCCGCCGGACGAGAAGAGCCCGTCTCCCGCCACGCCCGTCACTACTCCGGTCACGCCGATCACCCCCATCTTACCTTCCCAGCCGCCTCTCAACCCGCCTTCGCAGTTGCTCCTGCCATCGGTCTTCGCAGATCCACCGTCAACCCAGCATCTCTTGACGTCTCTCAACGACGTGATAGCCAAAAGCATCAGTCAAAAGTTCCAGCAGCCCCTAGATAGGCCACCTCACCTCGGTGACCTTCAGTTCATGAGGCCAGATAGACACGTATCGGTAATAAAAACGCCACCGGACAATCAAAGAAACTACGCGGCGCCCAGCAATTCGAGAGGAACGCCGAACAACAACGGCCAACCGTCGACAGGCGGCAAGGGAACGAGACCCAAGAGAGGAAAGTACCGAAACTACGACCGGGATAGTCTAGTGGAAGCGGTGAAAGCGGTCCAAAGAGGCGAGATGTCGGTACATCGAGCGGGCTCCTACTACGGGGTGCCGCACTCTACGCTAGAATACAAAGTGAAGGAGCGGCACTTGATGCGGCCGCGGAAGCGGGAGCCGAAACCCCAGCAGGAGGTGAAGCCGCAGCCGCCGAAGCCGCCGCAGCCGAAGCCGCCGACGAAGCCGTTCTCGAACGGGCTGAACGGGCCGGAGACGCCGGGCTACCCGCCGAGCTACCCGTTCTGGCAAGCGGGCGGGttcgcgccgcccgcgccggaCCTGTACGCGTCGCACATGATGCGGCGGCTGCGGGAGGAGGCGCCGCCGCCGGCGAACGGGTCGTTCCTGGAGGGCATCATCCGGTCGAGCCTGGAGCGGCCGGGCGCGGCGCTGCTGCAGCGGCTGACGGGCGAGGCGCGGCCGGACGCGCCCACGCTGCTGCGGCGGCTGGCCGGCTCGCCCGAGGAgccgcccgcgcgccgcccgcggcTGGCCAGCTCCGACCGCGCGCTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCGGACAAGCTGCGCCCGCGCAACGGCACGCCCACGCCGccccccgcgcccgccgcgccgcccgccgccgcgccgtccGACCGCGCCTAG
- Protein Sequence
- MNSLIRRRDFMAKFSLDRFCELALRPSLSEMKMHLLPDVGDKVAAASSSPSLTEQPLDLSAKSTSSTSGTPPPDPKNLDNSRLKRAALETASNSATRRAYTDDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLASETGHESDQDSDPDRPESPPSVILKIPTFPPPDEKSPSPATPVTTPVTPITPILPSQPPLNPPSQLLLPSVFADPPSTQHLLTSLNDVIAKSISQKFQQPLDRPPHLGDLQFMRPDRHVSVIKTPPDNQRNYAAPSNSRGTPNNNGQPSTGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEVKPQPPKPPQPKPPTKPFSNGLNGPETPGYPPSYPFWQAGGFAPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTGEARPDAPTLLRRLAGSPEEPPARRPRLASSDRALAAEMREAVQRLRADKLRPRNGTPTPPPAPAAPPAAAPSDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00971151;
- 90% Identity
- iTF_00166850;
- 80% Identity
- -