Clyc005035.1
Basic Information
- Insect
- Cecropterus lyciades
- Gene Symbol
- Mblk-1
- Assembly
- GCA_002930495.1
- Location
- MOOZ01000289.1:228015-244396[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-14 1.5e-11 44.4 0.0 1 38 86 124 86 130 0.93 2 2 8.1e-19 9.5e-16 57.9 0.0 1 43 294 337 294 339 0.95
Sequence Information
- Coding Sequence
- ATGCATTATGCTGTGGTGTTGGTGGTGGTAACACCACTCACTCTTTACGCGTGGATgtgGCTACCAGACGTTGGAGACAAGGTGGCGGCCGCCAGCTCGTCGCCGAGCCTCACGGAGCAGCCTCTCGACCTGAGCGCCAAGTCCACCTCCAGCACCAGCGGCACCCCGCCACCGGATCCCAAGAATCTGGATAACTCTAGATTAAAACGAGCCGCTCTGGAAACTGCCAGCAACAGTGCGACCAGACGCGCGTATACCGACGATGAGCTGCAATCAGCGTTGCGCGACATCCAATCCGGGAGACTGGGTACCCGGCGCGCCGCCGTCGTCTACGGCATCCCGCGGTCCACGCTTCGGAACAAGGTCAACAAATTCGGCCTAGCTTCCGAAACGGGCCACGAATCCGACCAGGACAGCGATCCGGACAGACCCGAATCACCGCCCTCCGTCATCTTAAAAATACCCACCTTCCCGCCGCCGGACGAGAAGAGCCCATCTCCCGCCACGCCCGTCACCACTCCGGTCACGCCGATCACCCCCATCTTACCCTCCCAGCCACCTCTCAACCCGCCTTCGCAGTTGCTTCTGCCCTCCGTTTTCGCAGATCCACCGTCTACCCAGCATCTCTTGACGTCTCTCAATGACGTGATAGCAAAAAGTATCAGTCAAAAGTTCCAGCAGCCCCTAGATAGGCCACCCCACCTTGGTGACCTTCAGTTCATGAGGCCGGATAGACACGTATCGGTAATCAAAACGCCACCTGACAATCAAAGAAATTACGCGGCGCCCAGCAATTCGAGAGGAACGCCGAATAACAACGGCCAACCGTCTACCGGCGGTAAGGGAACGAGACCAAAAAGAGGAAAGTATCGAAATTACGATCGGGACAGTCTAGTAGAGGCGGTGAAGGCGGTCCAAAGAGGCGAGATGTCGGTCCACCGAGCGGGCTCCTACTACGGGGTGCCACACTCGACGCTAGAATACAAAGTGAAGGAACGGCATTTGATGCGGCCGAGGAAGCGGGAGCCGAAGCCCCAGCAGGAGGTGAAGCCGCAGCCGCCGAAGCCGCCGCAGCCGAAGCCGCCGACGAAACCGTTCTCTAACGGCCTCAACGGCCCCGAGACGAGCTACCCGAGCTACCCGTTCTGGCAGGGAGGGtacgcgccgcccgcgccggaCCTATACGCGTCGCACATGATGCGGAGACTCCGCGAGGAGGCGCCGCCGGCGAACGGGTCGTTCCTGGAGGGGATCATCCGGTCGAGCCTGGAGCGGCCGGGCGCGGCGCTGCTGCAGCGGCTGAGCGAAGCGCGGCCGGACGCGCCGACGCTGCTGCGGCGGCTGGCGGGGTCGCCGGAGGAGCCGCCGGCGCGCCGCCCGCGGCTGGCCAGCGGCGACCGCGCGCTGGCCGCGGAGATGCGCGACGCGGTGCAGCGGCTGCGCGCGGACAAGCTGCGGCCGCGCAACGGCACGCCgacgccgccgcccgcgccgcccgcgccctcCGCCGCGCCCCCCGACCGCGCCTAG
- Protein Sequence
- MHYAVVLVVVTPLTLYAWMWLPDVGDKVAAASSSPSLTEQPLDLSAKSTSSTSGTPPPDPKNLDNSRLKRAALETASNSATRRAYTDDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLASETGHESDQDSDPDRPESPPSVILKIPTFPPPDEKSPSPATPVTTPVTPITPILPSQPPLNPPSQLLLPSVFADPPSTQHLLTSLNDVIAKSISQKFQQPLDRPPHLGDLQFMRPDRHVSVIKTPPDNQRNYAAPSNSRGTPNNNGQPSTGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEVKPQPPKPPQPKPPTKPFSNGLNGPETSYPSYPFWQGGYAPPAPDLYASHMMRRLREEAPPANGSFLEGIIRSSLERPGAALLQRLSEARPDAPTLLRRLAGSPEEPPARRPRLASGDRALAAEMRDAVQRLRADKLRPRNGTPTPPPAPPAPSAAPPDRA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00971151;
- 90% Identity
- iTF_00166850;
- 80% Identity
- -