Tlin027010.1
Basic Information
- Insect
- Thymelicus lineola
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963932265.1
- Location
- OZ010703.1:3101099-3104832[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-14 1e-11 45.2 0.0 1 38 74 112 74 117 0.94 2 2 2.4e-18 1.2e-15 57.9 0.0 1 43 279 322 279 324 0.95
Sequence Information
- Coding Sequence
- ATGGTCACAGTTATATTAAGACTTGAACTTGATCAACCTTGTACTGGACGAATGGAGCGGCACAGAGTATACAGTGTCAGAAAGAGTCGAGTGTCGGCGGGACGGGAAAAGGAAATAAAAGGCGAAGGGAAAGATAAAGATGCATTCATAGTAGTCCGTTATCGATTAAAGCGCTCCGCTCTGGATACAGGTAGCAATAGCGTGACCAGACGCGCCTACACCGAGGATGAGCTGCAGTCGGCGCTGCGCGACATCCAGTCGGGTCGGCTCGGCACCCGGCGCGCCGCCGTCGTCTACGGCATCCCCCGCTCCACCCTCAGGAACAAGGTCAACAAGTTCGGCCTCGCCTCCGACGTCACCCACGACTCCGACCAGGACAGCGATCCCGACAGACCCGAGTCTCCCCCCTCCGTCATCCTCAAGATCCCCACCTTCCCGCCGCCCGACGACAAGAGCCCTTCCCCTGCGACGCCCGTCACCACCCCCGTCACGCCGATCACCCCCATCCTGCCGCAGCCCACGCTCAACCCCTCGCAGCTGCTCCTGCCGCCCGTCTTCGCCGACCAGTCCTCCACCCAGCTCCTCACCTCCCTCAACGACGTCATCGCCAAGAGCATCAGCCAGAAGTTCCAGCAGCCCATGGACAGGCCGCCGCACCTCGGCGACCTGCAGTTCATGAGGCCCGACCGACACGTGTCCGTGATCAAGACGCCCCCCGACAACCAGAGGAACTACGCGGCGCCCAGCAACTCCCGAGGCGCCCCCAACAACAACGGGCAGCCGGCCACCGGGGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACAGGAACTACGACCGGGACAGCCTCGTGGAGGCGGTGAAGGCGGTGCAGCGCGGCGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACGCTCGAGTACAAGGTGAAGGAGCGCCACCTGATGCGCCCGCGGAAGCGCGAGCCGAAGCCTCAGCAGGAGGTGAAACCGCAGCCGCCGAAGCCGCCACAGCCGAAGCCGCCGACCAAGCCGTTCTCGAACGGGCTGAATGGACCGGAGGGGCCGGGCTACCCGCCGGGCTACCCCTTTTGGCAGGCGGGGttcgcgccgcccgcgcccgacCTGTACGCCTCGCACATGATGCGGCGGCTGCGCGAGGAGGCGCCGCCGCCCGCCAACGGCTCCTTCCTCGAGGGGATTATCCGGTCGAGCCTCGAGCGGCCGGGCGCCGCGCTACTGCAGCGGTTGACGGGTGAGCCGCCCCGGCTGCCGGCGGAGGCGCCCACGCTGCTGCGACGGTTGGCGGGCGGCGGGGGCGCGGGGAGCGAGGAGGACGGGCCGCCCGCGCGGCGCGCACGCGTCGACAGCTCGGACCGCGCGCTGGCCGCCGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCCTACGCCGCCACCTGCGCCGCCCGACGCGCCGCTCGCCGCCCCGCTGGCCACCCCGCTCGCCGCGCCGCCCGACCGCACCTAG
- Protein Sequence
- MVTVILRLELDQPCTGRMERHRVYSVRKSRVSAGREKEIKGEGKDKDAFIVVRYRLKRSALDTGSNSVTRRAYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLASDVTHDSDQDSDPDRPESPPSVILKIPTFPPPDDKSPSPATPVTTPVTPITPILPQPTLNPSQLLLPPVFADQSSTQLLTSLNDVIAKSISQKFQQPMDRPPHLGDLQFMRPDRHVSVIKTPPDNQRNYAAPSNSRGAPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEVKPQPPKPPQPKPPTKPFSNGLNGPEGPGYPPGYPFWQAGFAPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTGEPPRLPAEAPTLLRRLAGGGGAGSEEDGPPARRARVDSSDRALAAEMREAVQRLRADKLRPRNGTPTPPPAPPDAPLAAPLATPLAAPPDRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00971151;
- 90% Identity
- iTF_00166850;
- 80% Identity
- -