Osyl001846.1
Basic Information
- Insect
- Ochlodes sylvanus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905404295.1
- Location
- FR990148.1:6265456-6278022[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-14 1.7e-11 44.2 0.0 1 38 147 185 147 191 0.93 2 2 1.1e-18 1e-15 57.6 0.0 1 43 352 395 352 397 0.95
Sequence Information
- Coding Sequence
- ATGGTTAACACGCCGGATCGCCGTTCCGAGGGTCCTGGGTTCGATGCCCAGCGAGGCGGAAATTTGAATGATGAATTTAAATTTCCGTTCTTGGTCTGGGTGTGTGTGTTCTTGTCTTGTGTGTTGTCCATGGCACCCACGACACAGGGTATCCTAGTGTGGTTTGTTGATACACAAGCACTTCAAGATCTTGACCTGAGTAGACTTGAAGCGTGGAGTACTGACGGTCTCCCTGCCCCCAGGCTACCAGACGTTGCGGATAAGGTGGCTGCAGCCAGCTCCTCGCCGAGCCTCACGGAGCAGCCGCTAGACCTCAGCGCCAAGTCTACCTCCAGCACCAGTGGAACTCCACCTCCTGATGGCAAGAATCTGGAGAATTCTAGATTAAAACGAGGCGGATTGGACGCTGCCAGCAACAGTGCGACCAGACGCGCCTACACCGACGATGAGCTCCAGTCGGCGCTCCGCGACATCCAGTCCGGCCGGCTCGGCACCCGCCGCGCCGCCGTCGTCTACGGCATCCCGCGCTCCACCCTCCGGAACAAGGTCAACAAGTTCGGCCTCGCCTCCGAAGCCGGCCACGAGTCCGACCAGGACAGCGATCCGGAGAGACCGGAGTCACCCCCCTCCGTCATCCTGAAGATACCCACCTTCCCGCCGCCCGACGACAAAAGCCCGTCCCCGGCGACGCCCGTCACCACGCCGATCACCCCGATCACGCCCCTCATGCCCCAGCCGTCTCTCAACCCGTCGCAGCTGCTCCTGCCGCCGGTGTTCGCCGATCAGTCCTCCACTCAACTCCTGACGTCCCTCAACGACGTCATAGCCAAGAGCATCAGTCAGAAGTTCCAGCAGCCCATGGACAGGCCGCCGCACCTCGGGGACCTGCAGTTCATGAGGCCCGACCGACACGTGTCGGTGATCAAGACGCCTCCCGACAACCAGAGGAACTACGCGGTCCCGAGCAACTCCCGGGGCACCCCCAACAACAACGGGCAGCCGGCCACCGGGGGGAAGGGGACGCGGCCGAAGCGCGGGAAGTACAGGAACTACGACCGGGACAGCCTCGTGGAGGCGGTGAAGGCGGTGCAGCGCGGCGAGATGTCGGTGCACCGCGCGGGCTCCTACTACGGCGTCCCGCACTCGACGCTCGAGTACAAGGTGAAGGAGCGGCACTTGATGCGCCCCAGGAAGCGGGAGCCGAAGCCGCAGCAGGAGGTGAAGCCGCCGCCGCCGAAGCCGCCGCAACCGAAACCGCCGTCGAAGCCATTCTCGAACGGGCTGAACGGGCCGGAGCCGCCGGGCTACCCGCCGGGGTACCCGTTCTGGCAGACCGGGTTCGCGCCGCCCGCGCCGGACCTGTACGCGTCGCACATGATGCGGCGGCTGCGGGAGGAGGCGCCGCCGCCGGCGAACGGCTCGTTCCTGGAGGGCATCATCCGGTCGAGCCTGGAGCGGCCCGGCGCGGCGCTGCTGCAGCGGCTGACGGGCGAGCCGCGGCCGCTGGCGGACGCGCCCAACCTGCTGCGGCGGCTGGCCGGCGAGCCCGAGGAGCCGCCGCCCGCGCGCCGCGCGCGCATCGACAGCTCCGACCGCGCGCTCGCCGCCGAGATGCGCGAGGCCGTGCAGCGGCTGCGCGCCGACAAGCTGCGCCCGCGCAACGGCACGCCCACGCCGCCGCCCGCGCCGCCCGACGCGCCGCTCGCCGCGCCGCCCGCGCCGCCCGACCGCACCTAG
- Protein Sequence
- MVNTPDRRSEGPGFDAQRGGNLNDEFKFPFLVWVCVFLSCVLSMAPTTQGILVWFVDTQALQDLDLSRLEAWSTDGLPAPRLPDVADKVAAASSSPSLTEQPLDLSAKSTSSTSGTPPPDGKNLENSRLKRGGLDAASNSATRRAYTDDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLASEAGHESDQDSDPERPESPPSVILKIPTFPPPDDKSPSPATPVTTPITPITPLMPQPSLNPSQLLLPPVFADQSSTQLLTSLNDVIAKSISQKFQQPMDRPPHLGDLQFMRPDRHVSVIKTPPDNQRNYAVPSNSRGTPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEVKPPPPKPPQPKPPSKPFSNGLNGPEPPGYPPGYPFWQTGFAPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTGEPRPLADAPNLLRRLAGEPEEPPPARRARIDSSDRALAAEMREAVQRLRADKLRPRNGTPTPPPAPPDAPLAAPPAPPDRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00971151;
- 90% Identity
- iTF_00166850;
- 80% Identity
- -