Mgen003096.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Megalopta genalis
Gene Symbol
TFIP11
Assembly
GCA_011865705.1
Location
NW:358147-383774[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.1e-101 3.8e-97 324.2 15.8 1 275 539 806 539 806 0.99
2 2 0.0013 6.2 5.4 0.1 244 272 820 848 811 851 0.88

Sequence Information

Coding Sequence
ATGAGGAGAAATATGGCACATCTAGTGTACAGTGTGCTACTTCTGGCGTCGTTCCTCGCCACGCCGACGGAATCCCAAACGCTGCTAGAAACGCTGAAGAGCTTCGGGCCGCCGGCAGAGGCCTTGAACAGAGCCGATCCTAACAACAAGATATACGACTTCATCATAGTAGGCGCCGGTTCCGCTGGCTCTGTTCTTGCCAATCGTCTCTCGGAGAACAAGAAATGGAACGTGCTGCTCCTGGAGGCGGGGGGTACAGAGACGCTGCTTCACCAGATCCCGATCCTCGTCTCGTACTTTCAACAGTCGAACTACAACTGGGGCTATAACGTGGAGCCGCAGAAGAACGCCTGTCTGGGGATGATCAACCATCAGTGCTCTTGGCCGCGGGGCAAAGTTCTAGGTGGCACCAGCACGCTCAATTACATGATCCATACGAGGGGGAACAGGCTCGATTATGATATCTGGGCCGCACTGGGTAACGAGGGCTGGTCTTACAACGAAATCCTGCCTTATTACATAAAGAGCGAGAAATTCAACGTGCCAGGTATTTGGGCAGATGATAGCGACGAAGAAGAATTATCTGCCAGACCATCGTTTAAAACTTTTGATAAAGGACCAAAGAATTATACAGCTCCTGTTAATTTCGTGGCAGGTGGTATTCAACAAGCAGGAAAACCaaaagaagaggaggagaaagacGAAGATGATAGTGATAAtgaaaatacaagtaaatcgcAGAGAGAATATCCAAATAGCTCTAGttCTGAAGATGAACGACCAAGCATGGCACCGTTACGTGCAACCTTTTCTATGAATACCGATGGAGACATCGCTGGCTTACGTAGGAAAAAAAGTAAAGTGAATCCCCTGCTCATGCAAAGCGGAATGGGTAGTTGGGAAGTTCATACGAAAGGTATTGGAGCAAAACTACTATTACAGaTGGGTTTCGAACCTGGCAAAGGATTGGGTAAGCAATTGCAAGGTATAAGTGCTCCAGTGGAAGTACATCTGAGAAAAGGGAGAGGTGCCATCGGTGCTTATGGTCCAGAAAAATGTCCAAAAGTgccagaaaagaaaaaggaagatgaTTTAGAGGAAGGGAAAGATTCTAAGGGCAAGCTATCACAGTGGCGAAAAGGAGACAGTAGTGCAACAAAGAAGAAAGTGAAATATGTTTATCGAAGTGTAGATCAGGTTTTGGAAGATGGAAAATTGAAACCTAATAAGAAAGTGAGGGTATCGAATGAAATGAGTAGAGTTAAGGTTATAGACATGACTGGTCCAGAACAAAGAATCCTTAGTGGATATCACGCAATAGCTGGAGGTCAGCAGAGACCCGATGAAAACGTTGTAATTACTGACAAGAAATCCAAAGTTAATTTTGCTCTACCAGAGCTTCAGCATAATTTGAATATACTTGTAGATATGTGTGAACAAGATATTATACAAAACGATAGACGCACAAGGCATTTGAGTGATAGAGTGGTTGCATTGGAAGCAGAAAAGAAAAGTATATCGAAAGTTATAGATCATCACGGTCAACTCATCGATACTTTAGAAAATGTGTTAGAAATTGTAGACAGGTTAATGGATGAAACCAATCAGTTGTCTTTACAAGAAACTGCCGAAGCCTTCAAAGATTTGCAAGATAAGTACTACGAGGAATATAAATTGTACGAGCTTGGCGAATTGGCCAGTAGTTTTGTCGGTCCCAAGATAAAGGATTGCTTAGCCAGTTGGAATCCCACAATGCAACCAAAGCAACCTATCAAATTGTTTGAACAGTGGAAGAGTATTCTGGAAAGTGGTACCACTACGCTTCAAACAAGAACTATGCATCCATATGATCAACTAGTTTGGAACGCATGGATGCCATCGATTAGAGGCGCCATTCAgCAGTGGGCTTGTAGACAGCCAGATCCGCTTAttgaattaatagaaatatggATGCCGTTGCTACCAGGTTGGATactggaaaatattttagatttattgaTTCTTCCAAAGCTTACTTTGGAAGTGGAAGAATGGAATCCTCTTACAGACACTGTGCCTATCCACACGTGGATTCATCCTTGGCTACCATTATTACGGAACCGTTTGGACACCTTAATATATCCAATAATCCGCCGTAAACTGGGTTCTGCATTAGGTGGTTGGCATCCATCCGACAGATCTGCAAGATTAATGCTGCAACCATGGGCCAACGTCTTTGCAAAGGGAGATATGGAAGCCTTCCTAGTTAAGAATATAATTCCAAAACTGCAAATAGCGCTCTCAGAGTTCGTCATAAACCCGCACCAGCAACACTTGGATCAGTGGAACTGGGTATACGAGTGGAAAGAACTGATTCCAACTCATATAATGGCCAGCTTAATGGACAAGTTCTTCTTCCCGAAATGGTTACAAGTTTTGGCCTTATGGTTGAATCATTCCCCCAACTATGATCAAGTCACAAACTGGTACATGGGTTGGAAAGGCATGCTAAGTGAGAAAATGCTCTCGGAACCACTAGTAAAAGAGCATTTCAAGAAAGCGTTGGACTTGATGAATAGAGCAGTCAGCGGGCCACAGAGTCACCAACCGGGAGCAATGGAGCAAGTTTCGTATCTGACAAGCTTAGAAAGAACTCAACCCACAATGTCGCAGATGCCAGCAAATGCTCAGCCAAGGATGGAGAGGCTCGCAGAGGCAGTGAGAACAGCATCGCAAATTCCTCAAGGCTTCAAGGACCTCGTGCAGAAGAAGTGCGAGGAAAGAGGCATCCTATTCATGCCAATACCAAATCGCTACAGAGAAGCGAAACAAGTATACAAAGTGGGCAACGTGCAAGCCTACATAGACGGCAACGTCTTATTCGTGTGCCACAACGGCATGAATTGGCTGCCGACGCATTTAAACGCACTGTTAGATATGTCTGAACTTTAG
Protein Sequence
MRRNMAHLVYSVLLLASFLATPTESQTLLETLKSFGPPAEALNRADPNNKIYDFIIVGAGSAGSVLANRLSENKKWNVLLLEAGGTETLLHQIPILVSYFQQSNYNWGYNVEPQKNACLGMINHQCSWPRGKVLGGTSTLNYMIHTRGNRLDYDIWAALGNEGWSYNEILPYYIKSEKFNVPGIWADDSDEEELSARPSFKTFDKGPKNYTAPVNFVAGGIQQAGKPKEEEEKDEDDSDNENTSKSQREYPNSSSSEDERPSMAPLRATFSMNTDGDIAGLRRKKSKVNPLLMQSGMGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEVHLRKGRGAIGAYGPEKCPKVPEKKKEDDLEEGKDSKGKLSQWRKGDSSATKKKVKYVYRSVDQVLEDGKLKPNKKVRVSNEMSRVKVIDMTGPEQRILSGYHAIAGGQQRPDENVVITDKKSKVNFALPELQHNLNILVDMCEQDIIQNDRRTRHLSDRVVALEAEKKSISKVIDHHGQLIDTLENVLEIVDRLMDETNQLSLQETAEAFKDLQDKYYEEYKLYELGELASSFVGPKIKDCLASWNPTMQPKQPIKLFEQWKSILESGTTTLQTRTMHPYDQLVWNAWMPSIRGAIQQWACRQPDPLIELIEIWMPLLPGWILENILDLLILPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWANVFAKGDMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVYEWKELIPTHIMASLMDKFFFPKWLQVLALWLNHSPNYDQVTNWYMGWKGMLSEKMLSEPLVKEHFKKALDLMNRAVSGPQSHQPGAMEQVSYLTSLERTQPTMSQMPANAQPRMERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQVYKVGNVQAYIDGNVLFVCHNGMNWLPTHLNALLDMSEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00898736;
90% Identity
iTF_00183943; iTF_00183281; iTF_00860386; iTF_00863266; iTF_00865315; iTF_00024614; iTF_00866698; iTF_00863949; iTF_00861871; iTF_00861136; iTF_00762547; iTF_00866004; iTF_00763224; iTF_00864633; iTF_00862559; iTF_01071018; iTF_00360209; iTF_00360898; iTF_00625490;
80% Identity
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