Basic Information

Insect: Mecyna flavalis
Gene Symbol: -
Assembly: GCA_949319885.1
Location: OX439429.1:6426811-6435711[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.006 0.53 11.8 1.0 3 23 720 741 719 741 0.96

2 23 0.26 23 6.6 0.3 1 22 1130 1151 1130 1151 0.95

3 23 2.9 2.6e+02 3.3 0.5 1 22 1192 1213 1192 1215 0.83

4 23 0.041 3.6 9.1 2.3 2 21 1225 1244 1224 1245 0.94

5 23 3.4 3e+02 3.1 0.1 2 23 1253 1275 1252 1275 0.87

6 23 0.0075 0.66 11.5 0.1 3 23 1296 1317 1294 1317 0.96

7 23 0.017 1.5 10.4 2.0 1 23 1323 1346 1323 1346 0.95

8 23 0.16 14 7.3 0.0 1 23 1372 1395 1372 1395 0.90

9 23 0.023 2.1 9.9 3.4 1 23 1400 1422 1400 1422 0.97

10 23 0.012 1 10.8 0.2 1 23 1428 1451 1428 1451 0.95

11 23 0.0013 0.11 13.9 1.3 1 23 1465 1487 1465 1487 0.98

12 23 0.0018 0.16 13.4 4.0 1 23 1535 1558 1535 1558 0.96

13 23 0.041 3.6 9.1 0.8 1 23 1621 1644 1621 1644 0.95

14 23 0.0014 0.12 13.8 2.1 2 23 1664 1686 1663 1686 0.95

15 23 0.11 9.5 7.8 0.1 2 23 1692 1714 1691 1714 0.93

16 23 0.012 1.1 10.8 0.2 1 21 1759 1779 1759 1780 0.95

17 23 0.0015 0.13 13.6 0.6 1 23 1790 1812 1790 1812 0.93

18 23 0.00014 0.012 16.9 0.3 2 23 1905 1927 1905 1927 0.93

19 23 4.1e-07 3.6e-05 24.9 1.4 3 23 1934 1954 1933 1954 0.98

20 23 0.0075 0.66 11.4 0.3 1 23 1974 1996 1974 1997 0.95

21 23 0.15 13 7.4 0.0 1 23 2019 2041 2019 2041 0.97

22 23 0.034 3 9.4 0.6 1 23 2047 2070 2047 2070 0.95

23 23 0.00032 0.028 15.8 0.4 1 23 2078 2101 2078 2101 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.006	0.53	11.8	1.0	3	23	720	741	719	741	0.96
2	23	0.26	23	6.6	0.3	1	22	1130	1151	1130	1151	0.95
3	23	2.9	2.6e+02	3.3	0.5	1	22	1192	1213	1192	1215	0.83
4	23	0.041	3.6	9.1	2.3	2	21	1225	1244	1224	1245	0.94
5	23	3.4	3e+02	3.1	0.1	2	23	1253	1275	1252	1275	0.87
6	23	0.0075	0.66	11.5	0.1	3	23	1296	1317	1294	1317	0.96
7	23	0.017	1.5	10.4	2.0	1	23	1323	1346	1323	1346	0.95
8	23	0.16	14	7.3	0.0	1	23	1372	1395	1372	1395	0.90
9	23	0.023	2.1	9.9	3.4	1	23	1400	1422	1400	1422	0.97
10	23	0.012	1	10.8	0.2	1	23	1428	1451	1428	1451	0.95
11	23	0.0013	0.11	13.9	1.3	1	23	1465	1487	1465	1487	0.98
12	23	0.0018	0.16	13.4	4.0	1	23	1535	1558	1535	1558	0.96
13	23	0.041	3.6	9.1	0.8	1	23	1621	1644	1621	1644	0.95
14	23	0.0014	0.12	13.8	2.1	2	23	1664	1686	1663	1686	0.95
15	23	0.11	9.5	7.8	0.1	2	23	1692	1714	1691	1714	0.93
16	23	0.012	1.1	10.8	0.2	1	21	1759	1779	1759	1780	0.95
17	23	0.0015	0.13	13.6	0.6	1	23	1790	1812	1790	1812	0.93
18	23	0.00014	0.012	16.9	0.3	2	23	1905	1927	1905	1927	0.93
19	23	4.1e-07	3.6e-05	24.9	1.4	3	23	1934	1954	1933	1954	0.98
20	23	0.0075	0.66	11.4	0.3	1	23	1974	1996	1974	1997	0.95
21	23	0.15	13	7.4	0.0	1	23	2019	2041	2019	2041	0.97
22	23	0.034	3	9.4	0.6	1	23	2047	2070	2047	2070	0.95
23	23	0.00032	0.028	15.8	0.4	1	23	2078	2101	2078	2101	0.96

Sequence Information

Coding Sequence: atGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCCATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCATCCTCGCCTCAAAAATCAAGGATTGTGTCTCTGTACAGATAAGCGAGAATGACGACCTTCCAACGAATGTCTGCAGGAAATGTGTGGATAATGTCAACAATTGGCATATTTTCAAGTCAGTATGTGAAAGGACACAAAACAAACTACAGTTGCTGATAAAAAAGGATGGCAGCCAACTAGAAGAGATACAAATAAAGAGTGAACCATTGTTTGATGAGGCATATGATGATGGAGTGGTTATTGATGGAGGATATCCAGATGACAATGAGAATGGCGCTGGTTCCAGCAAGGTGCAGCCAGAAGGCCCACCGATACTGGCATCACTGGGCCTCACTCCACGGAGTGATAAGAAAAATGTAGACCCTCGAATGGACTGGCAACGTGTCCATGCAATATTGAACATGGTACAAGACGATGATGTCATTGATTCACTGCAGTCCATCGAGGAGTGTGATGTTGTCCAGCAGTCTGATCACAACTCTGAGTCGGAAGCTGAACTAGAAGTTAATATTGATGACAGCTATATTGACTGCAAGAATGGATACATAAGCAAGAACAGAAAAGTCCTATCTAAAAATCCAAAGTTAACAACATCACAAAATAACGCGAAAATAAAAGAAGCTTCCAGATTGAGGAAAAGGAAACTGGAAACACCAAAGCACTGCCCGTTACCTAAACAGGCCTGGCAATTACTGTTCTCAGATGATCTACTCGAGTTAATTGTAGCGTCTACAAATGATAACATTCTTAAAACTGGGAATACTATTTCCGCTTCAACTAATGTTGGGGAAATAAAAACACTTATTGGGATTTTGTATCTACATGGTATAATGAGACCCACACATCAAAGTTGCCGTGACCTTTGGGGCAGAGATTGTGGAATTCCATGTGTCAGAAGTGCAATGAAGTATGAccgttttaaatttttactccAAAATATGTGTTTTGATAAAGTTGATGATGATAGTATTATACAATTTGATATAATGAAAAGGATTCGCAAAGTTTTTGAAATCTTCGCCATGAACTGTAGAACAGCTTTTGATGTGCAGAATTTAGTTGTTGTTGATGAGGTCATCGTCCCTGTATATGGGCCGTGCCCATTCCGTTATGATATTGATAAGAAACCACTCAAACGTGGCTTGAAAGTTGTACTTCTTGTAGATTCTTACAACTTTTATGTCAGTAACTTAGATGTAATAACTGATCCTTATTTTGGGCCCGAGGAAATTGTGAGCAAGTTGGCTCAACATTTGGCAGGTTCGGGAAGAACTTTAGTACTGGACAGTTGGTATACATCATTTAATCTCATTGATAAGCTCAAGAAAGAATATCAGTTGTATACAATTGCAGCGGTAAATCCCAAGGATGATGTAATACCTCCTCTTTTTGTATCAAAGTACAGAAAATGTCGTACATTCTTAACTGGGTTTTTGGATAATGACATTGCATTGACATCTTATATGAATTCTGATATGAAGTCTATGAATGTTTTAACAAATGAGCCGAAATTTTATAAGAGAGGACATGTCAATCATAACACAGTTGTTGCAGCATACAAAAAGAATCAGTCTGCTGTAGAAGTTATTGATGTATTAATGCACTACTACACCACCATGCAGCATACAAATGATTGGACACTTTCATTGTTTTTTACACTGCTGAATATTGCCTCGGTAAATGCTCAAGTTATATGGTGTTCGCTCAACTCTCATCGAGTGACTAAGCGCAGAGCATTCATCAATGAATTGGCTGTTAGTCTAATAGAAACAGAAGAGCCGTTGTCTCTGCTGAATGATATTCCTTTGAGAAGAGAGAAGTTTACAACCATGACTGATGTAACAATACCATTCAGAAACAGGAAGAGATGCAGGATCTGTGGTGCGGAGAGTGAGaaagatgaagaagaagaagacgaTGACGAAGAGATGAACGAGCCAGTCCAATCGTTCACAAAAATGCCGCACATGCCAGAAGTCTCAATTACAGTAATGCGACCCTCCGGTGAGACGTTGCAATCCCGTCAAGGTATTCAACAGCTCGCTTCCAAAGATTGCCTCGTTTGCGGACGTTCTTATAGGTACTCCCATAATGCTAGACGTCATGAGCTTACCGCTCATAGCTTCGATAGGTACACAAATAAGGTTACTAATAACAAAAAACCACTATCGCATATGCAACCAAAATTAAGACCAAATCCGTTTAACCCTAAAGCGCGCCTAATGCCAAACCCTATTAGCCACAAACTGCAATTGATGTCTAAGCCTATGCCTCAAAAAATTATTCCGCACAAAATAGTATCCCCACCGAAACCGATACTCATCAAATCGGGTAAGGGATCGCAAAATAATTTACCATATCCGCTCCGTATAAAAGCGCTAAAAGAtttacaaataaagaaaaaggaACCGCAAATTTTAAAAACTCTCCTAACATCGAAACCAGAAGTTCTGGTGTCAGAACCTGAAATTTTAAATTCCGGCCCCGAAAGTCCAGAGACATTGATTTCTGAACCAGAAATTGCATCTTTCCAAGTTGAGACTATTCTGTCGGAGCCAGACGGTTTTGAACAGCAACCAGGTGATGATGAAATGGACGGCGacaataatcaaaatcaaaattatgatACAGTTGATATGGATTCAGAAAATGAAATTGAGATCGCTCGTGAGCGAGAAAATGAAGGagaagaggaagaccaagaacaagatcAAACTGCAGAAGCAGATGATAACGTCCAAAACGACGAAGAAAATAACCATTACGAAGGTCAAAGCGATAACGAAAAAGATAATGGTGAGGAAAATGTCGGGCCCGAGGAGCATATCGGAGTTGACGAGAGCGATATTAACAAAGCTGAGCAGGAGATGAGAGAGCCAGAAGAAGGTATCGAAGAAAGAGAAAACGAGGAACAAAATATGAACCACGATGATAACATGGATGACGACGATGACGATCTGCCACCTATGGAGATCGCTCCAGTCGTGGAAATAAATGAAGACTTGCAGGCTAACTCTTACAACAGCGAAATGAACGAAGAGGAAGAGGAGGAAGAACTTGACGAAACCGGTGACCTGAACGACACCGCTGTTGAGGAGGAGGCTCCAAAAGAACTTGACCCAGATAAGTTGTATGTTACAAAAACTCAACGAGATTTTATTAGCAAATACCGTGATATCATTGAGCAGATAAATACAAAGCGCTGCCTATGTTGCGACAGGGAACATCCTCGAAGAAAAGCTGTTATCCAACATTTGCAAAAGAATGGGCACAAGGTGCCTAAGCACACTTGCTACAACTGCGTTATAACTTTTGGACATATTGGGGCTCTACTGAGCCACATGAGGTCAAATAGCTGCACAGATTTGTGGAAAATCATCTATAATGAAAACGGAATTACCGATGATTTAGTCCTGGAAGAACCAAAGGATAACAAAGTTCAATATAAAGATATCTTTAATGCTCGGTCATACACATGTAAATTATGTCCCGCAAAATTCCAACTAAAACAATTCATAATGAAACACGTTTTAGATGTTCATGAAGATGGCCAGTCTAGAGTGCCATTGCATTGTGTGCATTGCAGAGCTCGATTCAAAGACAagagtttaattaaaaaacatattcgTAACGGGGAATGCACTGTTGAAATTTCTTGTGATTTGTGTTCAGAGAAATTTGTGAGTATGTTGGATTTCAATGATCACGCCTTGGCTGTTCATGCCGGAAGCTTCGATCAGTCTGACAATCAGAATAAGTGTGTTGATGGACGTCCTACAGATTGCCCAATATGTGGAAAGAAGAACAGTAGCTATCCGAATTTGGTAAAACATTTGAAGATAATTCATAACGAGGAAAAGCCTCATTACTGCCAGCATTGCGACTCCAAATACGAGCAAGCTGCTGATCTTAACCAACACATTTATATGGAGCATTCTGATAGAACTTTGGGTATGCCATCTACCGAGCCAGACATGTCGTTAGTCAAAGAAGAGCAAGAAGAGTATCACTACTCGTGCACAGAATGTAATGCCATATTTGAAACGGTTGATGCTTGGACAGACCATCAGGTTGCAGAGCATAATCAAATCGCTCATCACTGCGATCAGTGTGAAAAGAAATTCTTAAGGCCATCAGAACTCGCCGAGCATAAGAACACCCATTTGCGCGTGAAATTTTATCCTTGTAGCATTTGTTCTAATTCATACAGCACCCCTCAAAAGTTGTCTGAACACGTTCAGCAGGCGCACCCCGGCGCCGGTCCATTCCCTGGCACGTTGGAGTCAGAGTTCTACTGCGACATTTGTATAAGGTCATTCAAGAGTCGCCAAGCTTACTCCAACCATATGCGCATACATGCGAAGGTACCCACTACTAACAGAAAACCAGGTGATCCAAAAGGATTCTCACCGAAAATTATCGGAAAGCCAATCAAACAATTCGTTGATGAAATGCAAGTTGTGTCCTTTAAACGAAATTACAATGTTCCTAATGCTCCTTATTGCTGTGATATATGCGGTAAAGGATTTATGCATAAGAAGAATATTTGGAAGCATAAGAAAGTATTACATGCTGATCTTTTAAATGATATCAGAAATGATAGTGAAGAGAATACTATGCACGCATCAACCGAGGATGATGAATATAATGCTGATGAAAATGGTGCTGTGCTTTCTACGCCTCAATTTAACAGTTTTAATTTTACCAATTTCACTAATAATGTGCAACCACAAGTGCAGCAACCAGATCCTATGCCATTCGCATGTGACATTTGTTTCAAACGTTTTCCATTGCGCACAAGCGTGTGGAAACACAAGCGTGCCAAACATGGTATCGTCGGTAATCCCGATAATCCGGGCCAACCAAATGAAGCTGGTAGCAGATCGAGTTGTACAATTTGTAAAATTACATTTTCAGACAAAAAGTCTTATTACCGACATCGAAAGAATGTTCACAAATCGTCCTCGCAGATGTGCAAAATTTGTGGAAAACCACTTAACTCGACATTGGAGTTGTATGAGCATCTAAAAGCAGCTCACGCTCGCGAACTTCTAGGATATAATGCGAACCAAGGTAGCACAAGCAAGGTTCAAGAAATGAAACCAGAATTGGATGTTGATTATGAAAACGACCAAGATTCTGTTGACCCTAGTGTTGAATACCAGGCTAGATACCCTTGCGATACATGTGGGAAGCAATTTGTTGGACTTTTAGCATTGCAAAACCACCAGTGTATCAATCAGCTACAGGCACAACCCCAAACATTTGATTGTGAGATATGTCACAAGAGCTACACCTCGATAGCGGCCCTGAAAAGTCACCGTGGGTGGCATTTGCGATCACCGGACGGCAAAGCCGCTGCAAACAATTCTGGTCTATGGATGCCACAACACAAAGTAACTAGTAAAGTTAGTAAACATGAGGTAGTTGACCCGTCACAGCTTGCGCGCGTGACACATTCAACACCAGTGTCCACAGCTGTGACAGCAAAAAGAAGATTACCACCAGAAGTCGAAGTGACAGTGGTGAATCCAAATAAAAAGTTGCGATCGGACGACTCTGTCGAAATGGAGCAACATAACAGCATGTCTGGAAGTGTCGAGGATAGATATTGTACGATATGTGACAAAGAGTTTACAAAGAGGGCAGCCTATCAGCGGCACATGGATGAGGTGCATCAACCGAATTCCGTATTCTGCCCCGTCTGTGATAAGAGTTTCACACGGAAATCGACTTTGCTCGTTCATATGAAGAAGCATTACGAGAGCGGAGAAGGCAGTTCGGCTGGGACGGCACAGCTGGAAGAGGACATTCCGTACGCCTGCGATCTGTGTGGTGCGCAGTACGACAACGAGAAGGCGCTAAAGGCTCACCGAGCGAGGCACCATGGAGAGGACGAGTCAGGCGAGTCGGACGATGACGGCAGCGTGCCCATCGCGCAGCCCGGCGAGTTCACCTGCGGGCAGTGCGGCGACGGCGTGGCGACCCCCCGCGACCTCATAGCGCACCGCACCATGCACGCGACACCTACCAAATTTTTCTGCAACATTTGCAAAGTTTACTTTGCCCGTGCCCTTGACCTCTCGTCGCACACTCGCGCGAGGCACTCCGACAACGAAAAGGTGTTTTTTCCATGTGCCATGTGTGACCGGTTCTACATGAACAAAAAGAGTTTACAACGACACATTGAGATGGCTCATTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPILASKIKDCVSVQISENDDLPTNVCRKCVDNVNNWHIFKSVCERTQNKLQLLIKKDGSQLEEIQIKSEPLFDEAYDDGVVIDGGYPDDNENGAGSSKVQPEGPPILASLGLTPRSDKKNVDPRMDWQRVHAILNMVQDDDVIDSLQSIEECDVVQQSDHNSESEAELEVNIDDSYIDCKNGYISKNRKVLSKNPKLTTSQNNAKIKEASRLRKRKLETPKHCPLPKQAWQLLFSDDLLELIVASTNDNILKTGNTISASTNVGEIKTLIGILYLHGIMRPTHQSCRDLWGRDCGIPCVRSAMKYDRFKFLLQNMCFDKVDDDSIIQFDIMKRIRKVFEIFAMNCRTAFDVQNLVVVDEVIVPVYGPCPFRYDIDKKPLKRGLKVVLLVDSYNFYVSNLDVITDPYFGPEEIVSKLAQHLAGSGRTLVLDSWYTSFNLIDKLKKEYQLYTIAAVNPKDDVIPPLFVSKYRKCRTFLTGFLDNDIALTSYMNSDMKSMNVLTNEPKFYKRGHVNHNTVVAAYKKNQSAVEVIDVLMHYYTTMQHTNDWTLSLFFTLLNIASVNAQVIWCSLNSHRVTKRRAFINELAVSLIETEEPLSLLNDIPLRREKFTTMTDVTIPFRNRKRCRICGAESEKDEEEEDDDEEMNEPVQSFTKMPHMPEVSITVMRPSGETLQSRQGIQQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKVTNNKKPLSHMQPKLRPNPFNPKARLMPNPISHKLQLMSKPMPQKIIPHKIVSPPKPILIKSGKGSQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVETILSEPDGFEQQPGDDEMDGDNNQNQNYDTVDMDSENEIEIARERENEGEEEDQEQDQTAEADDNVQNDEENNHYEGQSDNEKDNGEENVGPEEHIGVDESDINKAEQEMREPEEGIEERENEEQNMNHDDNMDDDDDDLPPMEIAPVVEINEDLQANSYNSEMNEEEEEEELDETGDLNDTAVEEEAPKELDPDKLYVTKTQRDFISKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEEPKDNKVQYKDIFNARSYTCKLCPAKFQLKQFIMKHVLDVHEDGQSRVPLHCVHCRARFKDKSLIKKHIRNGECTVEISCDLCSEKFVSMLDFNDHALAVHAGSFDQSDNQNKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEEKPHYCQHCDSKYEQAADLNQHIYMEHSDRTLGMPSTEPDMSLVKEEQEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSEHVQQAHPGAGPFPGTLESEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFSPKIIGKPIKQFVDEMQVVSFKRNYNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNDIRNDSEENTMHASTEDDEYNADENGAVLSTPQFNSFNFTNFTNNVQPQVQQPDPMPFACDICFKRFPLRTSVWKHKRAKHGIVGNPDNPGQPNEAGSRSSCTICKITFSDKKSYYRHRKNVHKSSSQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSTSKVQEMKPELDVDYENDQDSVDPSVEYQARYPCDTCGKQFVGLLALQNHQCINQLQAQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPVSTAVTAKRRLPPEVEVTVVNPNKKLRSDDSVEMEQHNSMSGSVEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYESGEGSSAGTAQLEEDIPYACDLCGAQYDNEKALKAHRARHHGEDESGESDDDGSVPIAQPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01281537; iTF_01282607; iTF_00074762; iTF_00076812; iTF_01280629; iTF_00365115; iTF_01503184; iTF_01125681; iTF_00752278; iTF_01504093;
90% Identity: -
80% Identity: -