Basic Information

Insect: Glyphodes pyloalis
Gene Symbol: -
Assembly: GCA_037074685.1
Location: JAYKKO010000002.1:15101324-15111393[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0053 0.51 11.8 1.0 3 23 623 644 622 644 0.96

2 23 0.54 52 5.5 0.2 1 21 1032 1052 1032 1053 0.96

3 23 7.4 7.1e+02 1.9 0.3 1 22 1094 1115 1094 1117 0.82

4 23 0.037 3.5 9.2 2.3 2 21 1127 1146 1126 1147 0.94

5 23 0.99 96 4.7 0.0 2 23 1155 1177 1154 1177 0.89

6 23 0.0066 0.64 11.5 0.1 3 23 1198 1219 1196 1219 0.96

7 23 0.0013 0.13 13.7 1.9 1 23 1225 1248 1225 1248 0.96

8 23 0.14 13 7.4 0.0 1 23 1274 1297 1274 1297 0.90

9 23 0.021 2 10.0 3.4 1 23 1302 1324 1302 1324 0.97

10 23 0.0096 0.92 11.0 0.2 1 23 1330 1353 1330 1353 0.95

11 23 0.0011 0.11 13.9 1.3 1 23 1366 1388 1366 1388 0.98

12 23 0.0016 0.15 13.5 4.0 1 23 1436 1459 1436 1459 0.96

13 23 0.026 2.5 9.7 1.3 1 23 1522 1545 1522 1545 0.95

14 23 0.0012 0.12 13.8 2.1 2 23 1567 1589 1566 1589 0.95

15 23 0.1 9.8 7.8 0.2 2 23 1595 1617 1594 1617 0.93

16 23 0.011 1.1 10.8 0.2 1 21 1661 1681 1661 1682 0.95

17 23 0.0014 0.13 13.7 0.6 1 23 1692 1714 1692 1714 0.93

18 23 0.00012 0.012 17.0 0.3 2 23 1807 1829 1807 1829 0.93

19 23 3.7e-07 3.5e-05 24.9 1.4 3 23 1836 1856 1835 1856 0.98

20 23 0.0044 0.42 12.1 0.8 1 23 1876 1898 1876 1899 0.95

21 23 0.13 13 7.4 0.0 1 23 1921 1943 1921 1943 0.97

22 23 0.03 2.9 9.4 0.6 1 23 1949 1972 1949 1972 0.95

23 23 0.00028 0.027 15.8 0.4 1 23 1980 2003 1980 2003 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0053	0.51	11.8	1.0	3	23	623	644	622	644	0.96
2	23	0.54	52	5.5	0.2	1	21	1032	1052	1032	1053	0.96
3	23	7.4	7.1e+02	1.9	0.3	1	22	1094	1115	1094	1117	0.82
4	23	0.037	3.5	9.2	2.3	2	21	1127	1146	1126	1147	0.94
5	23	0.99	96	4.7	0.0	2	23	1155	1177	1154	1177	0.89
6	23	0.0066	0.64	11.5	0.1	3	23	1198	1219	1196	1219	0.96
7	23	0.0013	0.13	13.7	1.9	1	23	1225	1248	1225	1248	0.96
8	23	0.14	13	7.4	0.0	1	23	1274	1297	1274	1297	0.90
9	23	0.021	2	10.0	3.4	1	23	1302	1324	1302	1324	0.97
10	23	0.0096	0.92	11.0	0.2	1	23	1330	1353	1330	1353	0.95
11	23	0.0011	0.11	13.9	1.3	1	23	1366	1388	1366	1388	0.98
12	23	0.0016	0.15	13.5	4.0	1	23	1436	1459	1436	1459	0.96
13	23	0.026	2.5	9.7	1.3	1	23	1522	1545	1522	1545	0.95
14	23	0.0012	0.12	13.8	2.1	2	23	1567	1589	1566	1589	0.95
15	23	0.1	9.8	7.8	0.2	2	23	1595	1617	1594	1617	0.93
16	23	0.011	1.1	10.8	0.2	1	21	1661	1681	1661	1682	0.95
17	23	0.0014	0.13	13.7	0.6	1	23	1692	1714	1692	1714	0.93
18	23	0.00012	0.012	17.0	0.3	2	23	1807	1829	1807	1829	0.93
19	23	3.7e-07	3.5e-05	24.9	1.4	3	23	1836	1856	1835	1856	0.98
20	23	0.0044	0.42	12.1	0.8	1	23	1876	1898	1876	1899	0.95
21	23	0.13	13	7.4	0.0	1	23	1921	1943	1921	1943	0.97
22	23	0.03	2.9	9.4	0.6	1	23	1949	1972	1949	1972	0.95
23	23	0.00028	0.027	15.8	0.4	1	23	1980	2003	1980	2003	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCCATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGTATCAAAAATCAAGAATTGTGTCTCTGTGCAGATAAGCGAGAATGACGACTTGCCTACGAAAGTCTGCAGGAAATGTATGGACAATGTCAACAATTGGCATATATTCAAGTCAGTGTGTGAAAGGACACAAAACAAACTACAGTTGCTGATAAAAAAGGATGGCAGCCAACTAGAAGAGATTCATATAAAAAGTGAGCCTGTATTTGATGAGGCATATGATGATGGAGTGACTATTGATGGCTCCTACCCTGATGGTGACAATGATGCTGGCGCAGGCTCGAGTAAGATGCAGCCAGAAGGCCCACCAATATTGGCGTCACTGGGCCTCACTCCACGGAGTGATAAGAAAAATGTAGACCCTCGAATGGACTGGCAACGAGTCCATGCAATATTGAACATGGTTCAAGATGATGATGTCATTGATTCACTGCAGTCCATCGAGgagtgtgatgttgtccagcaGTCTGATCACAACTCTGACTCGGAGGCTGAACTTCAAGTAGATATAGATGACAGCTACGTAGATTGCAAGAATGGATATATTTGTAGAAGCAGGAAAGTTTTATCGAAAAATCCAAAGTTGTCAACATCCCAAAATAATGCTAAAATCAAAGAAGCCTCAAGACTGAGGAAAAGAAAGCTGGAAATGTCCAAGCACTGCCCGTTACCCAAACAGGCCTGGCAAATGTTATTTTCGGATGACTTGCTTGAATTAATTGTGGCATCCACAAATGACAATATACTTAAATCCGGTAATGCGCTTTTAACATCAACGAATGttgcagaaataaaaacactCATTGGAATTTTGTACTTACATGGTATAATGAGACCTACACACCAAAGTTGCCGTGACCTTTGGAACAGGGACTGTGGAATACCTTGTGTCAGAAGTGCTATGAAGTATGAccgttttaaatatttgctaCAAAACTTGTGTTTTGACAAAGAGGATGATGATAGCATTATACAGTTTGATATCATGAAGAGAATTCGTAAAGTGTTTGAAATATTTGCTATGAATTGTAGAACAGCATTTGATGTGGAGAACTTAGTTGTTGTTGATGAGATCATTGTCCCAGTTTATGGGCCTTGCCCATTCCGTTATGATATTGATAAGAAACCACTTAAACGCGGTTTGAAGATGGTGCTTCTGGTTgattcatataatttttatgttagcAACTTGGATGTTATAACAGATCCTTATTTTGGACCAGAAGAAATTGTTAGTAAGTTGATACAACATTTAGCTGGTTCTGGAAGAACTGTGGTAATAGATAGTTGGTTTACATCATCTGAtctaattgacaaactaaaGAGAGAATATCAGCTATTTACAATTGCGGCTGTGAATCCCAAAGATGATGTCATTCCACCTCTCTTTGTATCAAAGTACAGAAAGTGCAGGACGTTCTTAACTGGGTTTTTAGATAATGACATCACACTGACATCTTATATGAATTCTGATATGAAGTCTGTAAATGTCTTAACAAATGAGCCTAAGTTTTATAAAAGGGGTCATGTTAATCATAACACAGTAGTCGCTGCTTATAAAAAGAACTCTTCGTCTGTTGAGGGCGCCGAAAGTGAGAAAGATGAAGAGGAAGAAGAAGATGAAGACGATGACATGAACGAGCCAATTAAATCTTTCACGAAAATGCCTCACATGCCGGAAGTGTCCATCACAGTGATGCGACCCACCGGTGAAACGTTGCAGTCCCGTCAAGGTATTCAGCAACTTGCCTCCAAAGATTGCCTCGTATGTGGACGTTCGTATAGGTACTCCCATAATGCTAGACGTCATGAACTCACTGCTCATAGTTTTGACCGCTACACAAATAAAGTTACGAACAACAAAAAACCGCCCGCTCATATGCAACCAAAATTAAGACCAAATCCGTTTAATCCTAAAGCACGTCTAATGCCGAATCCGATTAGTCACAAAATGCAACTTATGTCTAAGCCCATGCCTCAAAAAATTATGCCGCATAAAGTAGTAACACCACCGAAACCTATACTTATCAAATCAGCGAAAGGACCCCAAAATAATTTACCTTACCCGCTTCGGATTAAGGCGTTAAAAGActtacaaataaagaaaaaggaaccgcaaattttaaaaacgttattaACAGCTGCACCTGAAGTTTTGGTATCTGAACCGGAAATTATGAATTCGGGACCAGAAAGTCCCGAAACATTAATTTCGGAACCAGAAATCGCCTCTTTCCAAGTTGAAACTATTCTATCGGAACCAGACGGCTATGACCAGCAGCCTGGCGATGACGAAATGGACGGTGACTTAACTAATAATCAAAATCAGCATTACGATACTGTTGATATGGATTctgaaaatgaaattgaaattgcTCGCGAACAAGAGCAAAACGAAGGTGAAGAGGAGGATCAAGATCAGATCGTAGACGGTGTTGATAACCACGAAGAGCAAAATCATGATGGGGATCCTTTTGACGGGCaaagtgaaaatgaaaaagaTAATGCCGAAGATAATATAGAGCAGGAAGAGCATATCGGAGTTGACGAAAGCGATATAAGAGATGAAGAAGAAATGCGAGAAGGAGATGACTGTAATGAGGAACGAGAAAACGATGAACAAGATATGAATCATGATGAAAACGCAGACGATGATGACGATCTTCCTCCTATGGAGATCGCTCCTGAAGTAGAAATTAATGAAGACATGCAAACTAATTCATATAATAGCGAAATCAACGAAGAAGAGGAAGAAGAGCTTGAGGAAACTGCTGAATTAAATGACACTGCGGTTGAAGAGGAACCCCCTAAAGAACTTGACCCAGATAAACATTACGTTACTAAGACCCAAAGAGACTTCATACACAAGTATCGCGACATCATACAACAAATCAACACCAAGCGTTGTCTTTGTTGCGATAGAGAACATCCTCGCAGAAAAGCTGTCATTCAACATTTGCAAAAGAATGGACACAAGGTGCCCAAACATACTTGTTACAACTGTGTAGTAACATTCGGTCATATCGGCGCTCTACTTAGCCACATGAGAGCAAATAACTGTACAGATTTATGGAAAATAATCTACAACGAAAATGGTATAACCGATGATTTGGTCTTGGAAGAACCAAAGGATAACAAAGTTCAGTACAAAGATATATTCAATGCTAGGTCATACGCATGCAAATTATGTCCAGCTAAATTCCAATTGAAACAATTTATAATGAAACATGTTTTGGATGTTCACGAAGATGGACAGTCAAGAGTGCCTTTGCATTGTGTGCACTGTAGGGCTCGATTTAAAGACAAGAGCctaattaaaaaacacattcGTAACGGTGAGTGTACTGTTAACATTTCTTGTGATCTGTGTTCAGAGATATTTGTGAATATGCAGGACTTCAATGATCACGCCTTGGCTGTTCATGCCGGAAGTTTCGATCAATCTGATAATCAAAACAAGTGTGTCGATGGACGTCCTACAGATTGTCCGATCTGTGGAAAGAAGAATAGTAGCTATCCGAATTTggtaaaacatttgaaaataattcacAATGAGGAAAAACCTCACTACTGCCAGCACTGTGACGCCAAATACGAGCAAGCTGCTGATCTTAACAAGCACATTTACACGGAACATTCTGATAGAACATTGGGTATGCAGAATACCGAGCCTGACATGTCTTTGGTTAAAGAAGAACAAGAAGAGTATCATTATTCGTGCACAGAATGTAATGCCATATTCGAAACCGTTGACGCTTGGACGGATCATCAGGTTGCTGAACATAATCAGGTTGCTCATCATTGCGACCAATGCGAGAAGAAATTCTTGCGACCATCCGAACTCGCCGAGCATAAGAACACTCATTTGCGCGTGAAATTTTATCCTTGTAGCATTTGTTCCAACTCTTACAGTACTCCTCAGAAATTATCTGACCACGTTCAGAACGCTCACCCTGGCGTTAGTACAATACCGACATTGGATTCCGAGTTCTATTGTGACATATGCATCCGGTCATTCAAGAGTCGACAAGCTTACTCTAACCACATGCGTATACATGCTAAAGTGCCCACCACTAATAGAAAACCTCAGGATCCAAAAGGATTTTCTCCGAAAATTATCGGAAAGCCAATCAAGCAATTTACCGATGATATGCAAATTGTTTCATTTAAACGAAGTTACAATGTTCCTAATGCTCCTTATTGTTGTGATATATGTGGCAAAGGATTTATgcataagaaaaatatttggaaaCACAAGAAAGTGCTACACGCTGACCTTCTCAACGACGTAAGGAATGACAGTGAAGAGAATACTATGCATGCATCCACGGAAGAGGATGAATATAATGCTGATGAAAATGGGGCTGCCCTCTCCACACCACAGTTCAACAGCTTTAACTTTACCAATTTCGCCAATAATGTGCAACCACAGGTGCAGCAATCGGACCCTATGCCATTTTCCTGCGATATTTGCTTCAAACGCTTCCCATTAAGAACTAGTGTATGGAAACATAAACGAGCAAAACATGGAGTTGTTGGTAATTCTGGCTCTGAAACACAAACTCAACCCAATGAAGCAGGAAGCAGGTCGAGTTGTACAATATGTAAAATAACCTTCTCAGACAAAAAATCTTACTATCGTCACAGAAAGAATGTCCATAAATCGTCTTCGCAAATGTGCAAAATTTGCGGTAAGCCGTTGAATTCAACTTTGGAGTTATATGAGCATTTGAAAGCGACTCACGCGCGTGAACTCCTAGGCTATAATGCTAATCAAGGTACTAGCCAAATGCAAGAAATGAAACCAGAGTTGGATGTTGATTATGAAAATGATCAAGACTCTGCCGATCCTAGTGTAGAATATCAAGCCAGATATCCTTGCGATACCTGTGGTAAACAATTTGTTGGTTTGTTGGCGTTACAAAACCACCAATGCATCAATCAATTACAATCACAGCCACAAACATTTGATTGTGAGATTTGCCATAAGAGCTATACTTCGATAGCTGCTCTGAAGAGTCATCGTGGCTGGCATTTACGTTCTCCTGACGGCAAAGCAGCCGCCAACAATTCTGGGTTATGGATGCCACAACACAAAGTAACTAGTAAGGTTAGTAAACATGAAGTTGTCGACCCATCCCAACTTGCGCGAGTGACGCATTCAACGCCAGTGGCCACCTCGGTTGTGGCCAAAAGAAGATTACCACCAGAAGTAGAAGTGACAGTGGTAAATCcaaataaaaagttacgatCAGACGACTCAGTCGAAATGGAACAGAACAACAGTATGTCCGGTAGTGTCGAGGATAGGTACTGCACGATATGTGACAAGGAGTTCACGAAGAGAGCGGCTTACCAGCGCCATATGGACGAAGTGCATCAGCCAAATTCTGTCTTCTGCCCCGTGTGTGACAAGAGTTTTACGCGAAAGTCGACGTTGCTGGTCCACATGAAGAAGCATTACGAAGGCGGTGAAGGCAGTTCAGCGGGAACTGCTCAGGTGGATGACGATGCTCCGTACGCTTGCGACCTATGTGGTGCGCAGTATGACAACGAAAAAGCATTGAAGACTCATCGGATGAGGCACCATGGGGAGGATGAGTCTGGTGAATCAGAAGACGAGGGCAGCGTGCCCATCGCTCAGCCTGGCGAGTTCACCTGTGGGCAGTGCGGCGACGGCGTCGCGACGCCTCGAGACTTGATTGCCCACCGCACAATGCACGCGACACCCACCAAATTTTTCTGCAACATTTGCAAGGTATACTTTGCACGCGCTCTCGACCTGTCATCGCACACTCGGGCGAGGCACGCAGAcaacgaaaaagtttttttcccaTGTGCCATGTGTGATCGCTTTTACATGAACAAGAAGAGTTTACAACGACACATCGAGATGGCACATTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLVSKIKNCVSVQISENDDLPTKVCRKCMDNVNNWHIFKSVCERTQNKLQLLIKKDGSQLEEIHIKSEPVFDEAYDDGVTIDGSYPDGDNDAGAGSSKMQPEGPPILASLGLTPRSDKKNVDPRMDWQRVHAILNMVQDDDVIDSLQSIEECDVVQQSDHNSDSEAELQVDIDDSYVDCKNGYICRSRKVLSKNPKLSTSQNNAKIKEASRLRKRKLEMSKHCPLPKQAWQMLFSDDLLELIVASTNDNILKSGNALLTSTNVAEIKTLIGILYLHGIMRPTHQSCRDLWNRDCGIPCVRSAMKYDRFKYLLQNLCFDKEDDDSIIQFDIMKRIRKVFEIFAMNCRTAFDVENLVVVDEIIVPVYGPCPFRYDIDKKPLKRGLKMVLLVDSYNFYVSNLDVITDPYFGPEEIVSKLIQHLAGSGRTVVIDSWFTSSDLIDKLKREYQLFTIAAVNPKDDVIPPLFVSKYRKCRTFLTGFLDNDITLTSYMNSDMKSVNVLTNEPKFYKRGHVNHNTVVAAYKKNSSSVEGAESEKDEEEEEDEDDDMNEPIKSFTKMPHMPEVSITVMRPTGETLQSRQGIQQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKVTNNKKPPAHMQPKLRPNPFNPKARLMPNPISHKMQLMSKPMPQKIMPHKVVTPPKPILIKSAKGPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAAPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPDGYDQQPGDDEMDGDLTNNQNQHYDTVDMDSENEIEIAREQEQNEGEEEDQDQIVDGVDNHEEQNHDGDPFDGQSENEKDNAEDNIEQEEHIGVDESDIRDEEEMREGDDCNEERENDEQDMNHDENADDDDDLPPMEIAPEVEINEDMQTNSYNSEINEEEEEELEETAELNDTAVEEEPPKELDPDKHYVTKTQRDFIHKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRANNCTDLWKIIYNENGITDDLVLEEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPLHCVHCRARFKDKSLIKKHIRNGECTVNISCDLCSEIFVNMQDFNDHALAVHAGSFDQSDNQNKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEEKPHYCQHCDAKYEQAADLNKHIYTEHSDRTLGMQNTEPDMSLVKEEQEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSDHVQNAHPGVSTIPTLDSEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPQDPKGFSPKIIGKPIKQFTDDMQIVSFKRSYNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNDVRNDSEENTMHASTEEDEYNADENGAALSTPQFNSFNFTNFANNVQPQVQQSDPMPFSCDICFKRFPLRTSVWKHKRAKHGVVGNSGSETQTQPNEAGSRSSCTICKITFSDKKSYYRHRKNVHKSSSQMCKICGKPLNSTLELYEHLKATHARELLGYNANQGTSQMQEMKPELDVDYENDQDSADPSVEYQARYPCDTCGKQFVGLLALQNHQCINQLQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPVATSVVAKRRLPPEVEVTVVNPNKKLRSDDSVEMEQNNSMSGSVEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSAGTAQVDDDAPYACDLCGAQYDNEKALKTHRMRHHGEDESGESEDEGSVPIAQPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961156;
90% Identity: -
80% Identity: -