Basic Information

Insect: Ostrinia nubilalis
Gene Symbol: -
Assembly: GCA_963855985.1
Location: OY979739.1:5668402-5677041[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0086 0.78 11.3 1.5 3 23 697 718 696 718 0.96

2 23 0.26 23 6.6 0.3 1 22 1107 1128 1107 1128 0.95

3 23 8.3 7.4e+02 1.9 0.3 1 22 1169 1190 1169 1192 0.82

4 23 0.041 3.7 9.1 2.3 2 21 1202 1221 1201 1222 0.94

5 23 0.59 53 5.5 0.1 2 23 1230 1252 1229 1252 0.89

6 23 0.026 2.3 9.7 0.4 3 23 1272 1293 1270 1293 0.96

7 23 0.0029 0.26 12.8 3.1 1 23 1299 1322 1299 1322 0.96

8 23 0.15 14 7.3 0.0 1 23 1348 1371 1348 1371 0.90

9 23 0.0068 0.61 11.6 3.5 1 23 1376 1398 1376 1398 0.97

10 23 0.02 1.8 10.1 0.2 1 23 1404 1427 1404 1427 0.95

11 23 0.0013 0.11 13.9 1.3 1 23 1440 1462 1440 1462 0.98

12 23 0.0018 0.16 13.4 4.0 1 23 1511 1534 1511 1534 0.96

13 23 0.0084 0.75 11.3 1.8 1 23 1597 1620 1597 1620 0.96

14 23 0.0014 0.12 13.8 2.1 2 23 1638 1660 1637 1660 0.95

15 23 0.11 9.6 7.8 0.1 2 23 1666 1688 1665 1688 0.93

16 23 0.028 2.5 9.6 0.2 1 21 1733 1753 1733 1754 0.94

17 23 0.0015 0.14 13.6 0.6 1 23 1764 1786 1764 1786 0.93

18 23 0.00043 0.039 15.4 0.2 2 23 1876 1898 1876 1898 0.93

19 23 1.4e-06 0.00013 23.2 1.3 3 23 1905 1925 1904 1925 0.98

20 23 0.0057 0.51 11.8 1.1 1 23 1944 1966 1944 1967 0.93

21 23 0.15 13 7.4 0.0 1 23 1988 2010 1988 2010 0.97

22 23 0.012 1 10.9 0.3 1 23 2016 2039 2016 2039 0.96

23 23 0.00031 0.028 15.8 0.4 1 23 2047 2070 2047 2070 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0086	0.78	11.3	1.5	3	23	697	718	696	718	0.96
2	23	0.26	23	6.6	0.3	1	22	1107	1128	1107	1128	0.95
3	23	8.3	7.4e+02	1.9	0.3	1	22	1169	1190	1169	1192	0.82
4	23	0.041	3.7	9.1	2.3	2	21	1202	1221	1201	1222	0.94
5	23	0.59	53	5.5	0.1	2	23	1230	1252	1229	1252	0.89
6	23	0.026	2.3	9.7	0.4	3	23	1272	1293	1270	1293	0.96
7	23	0.0029	0.26	12.8	3.1	1	23	1299	1322	1299	1322	0.96
8	23	0.15	14	7.3	0.0	1	23	1348	1371	1348	1371	0.90
9	23	0.0068	0.61	11.6	3.5	1	23	1376	1398	1376	1398	0.97
10	23	0.02	1.8	10.1	0.2	1	23	1404	1427	1404	1427	0.95
11	23	0.0013	0.11	13.9	1.3	1	23	1440	1462	1440	1462	0.98
12	23	0.0018	0.16	13.4	4.0	1	23	1511	1534	1511	1534	0.96
13	23	0.0084	0.75	11.3	1.8	1	23	1597	1620	1597	1620	0.96
14	23	0.0014	0.12	13.8	2.1	2	23	1638	1660	1637	1660	0.95
15	23	0.11	9.6	7.8	0.1	2	23	1666	1688	1665	1688	0.93
16	23	0.028	2.5	9.6	0.2	1	21	1733	1753	1733	1754	0.94
17	23	0.0015	0.14	13.6	0.6	1	23	1764	1786	1764	1786	0.93
18	23	0.00043	0.039	15.4	0.2	2	23	1876	1898	1876	1898	0.93
19	23	1.4e-06	0.00013	23.2	1.3	3	23	1905	1925	1904	1925	0.98
20	23	0.0057	0.51	11.8	1.1	1	23	1944	1966	1944	1967	0.93
21	23	0.15	13	7.4	0.0	1	23	1988	2010	1988	2010	0.97
22	23	0.012	1	10.9	0.3	1	23	2016	2039	2016	2039	0.96
23	23	0.00031	0.028	15.8	0.4	1	23	2047	2070	2047	2070	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAATTATGATCGTGTTTGTCGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTTCTCGCTTCGAAAATCAAGGATTGCGTCTCTGTACAGATAAGCGAGAATGACGACCTGCCGACGAATGTCTGCAGGAAATGTGTGGATAATGTCAATAACTGGCATATTTTCAAGACAGTATGTGAAAGGACACAAAACAAATTAGAGTTGCTGATAAAAAAGGATGGCAGCCAACTAGAAGAGATAAAAATAAAGAGTGAACCTGCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGGTCATACCCTGACAATGAGAATGCAGCAGGTTCCAGTAAGGTGCAGCCAGAAGGTCCACCTATCTTGGCGTCATTGGGGCTCACTCCACGAAGTGATAAGAAAAATGTAGACCCTCGCATGGACTGGCAACGAGTCCATGCAATATTGGACATGGTGCAAGACGATGATGTCATTGATTCACTCCAGTCCATTGAAGAGTGTGACTATGTGCAAGAGTCCGATCACAACTCTGACTCGGAGGCTGAGCTTCAAATGGATATAGATGACGAATACATTGATTGTAAAACTGGATACATGTGCAAAAACAGGACGGTCCTATCAAAAAATCCAAAATTGTCTACATCACTGATcaatgcaaaaataaaagaagccGCAAGATTGAGAAAGCACAAGATAGGAACAAACAAATTATGTGCACTACCTAAAAAGGCATGGCAAATGCTCTTTACAGACGACTTGCTTGAATTAATTGTTGCATCTACAAATGATAACATTCTCAAAGCTGGAAATGATATATCAACTTCCACTAACGCTGGGGAAATTAGAACActcattggtattttttatcTCCATGGCATTATGCGACCAACACATCAAAGTACCCGTGACCTTTGGAATAAGGACTGTGGAATTCCATGTGTCAGAAGTGCAATGAAGTATGAACGATTCAAGTTCCTTATACAGAACATGAGCTTCGAcaaagatgatgatgacagcATTATACAATTTGATATCATGAAAAGAATGCGTAAGGTGTTTGAAATATTCGCAATGAACTGCAGGACTGCTTATGAAGTTGATAACTTGGTTGTCATTGATGAGGTCATTGTCCCAGTTTATGGGCCTTGTCCATTTCGGTACAACATTGATAAGAAACCGCTAAAACGCGGCTTGAAAATGGTGCTTTTGGTGGATTCGGCGAGTTTTTATATCGGCAATTTGGATGTAATTACCGATCACTATTTTGGTGCTGATGCGATTgtgaataagatggtgcaacactTGGCTGGTTCGGGCAGAACCATAATAATGGACAGCTGGTACTCATCATTGGATTTGATTGATAAACTCAAGAAGGAATATCAGCTGTATTCGATTGCGGCCACCCATCCTAATGATGACATTATACCGCCGCTCTTTGTTTCGCAATACAGAAAATGTAAGACGTTTTTGACTGGATTTCTTGACAACGATATCGCACTGACGTCTTATATGAATTCTAAGAAAAAGTCATTGAATGTGTTGACGAATGAGCCAAAGTTTTATAAGAGGGGACATAAAAATTTCAACACAGCTGCTGCTTCGTATAGGAAGAACCAATCTGCTGTGGAAGTTATAGATGTGCTGATGCACTACTACACCACCATGCAGCACACCAATGATTGGACTCTTTCGTTATTTTTTACTCTTCTAAATATTGCTGCCGTTAATGCCCAAGTTATATGGTGTTCGCAGAATATGCACCAAGTGACAAAACGTCGTAACTTCATCAATGAACTGGCTTTTAGTCTCCTAGAAAGTGAGGATTCGTTTGTAGCAGATTATCCCATTGATCTGAATTTCCAGGGTATCGAGAGTGAGAAAGAGGACGAAGAGGAAGACGACGAGGAGGAGATGAGGGAACCTCCACAGAAGTATACTAAAGTGCCCAACATGCCTGAGGTATCCATCACGGTAATGCGGCCCACCGGGGAGACCCTGCATGCAAGGCAAGGCATCCAGCAACTCGCCTCCAAGGACTGCCTCGTCTGCGGCCGCTCATACAGGTACTCCCACAACGCGCGTCGTCACGAACTCACGTCACACAGCTTCgataggtacaccaacaaagtcgtCAACAAAAAACAACCCTCCCACATGCAACCGAAACTAAGACCAAACCCGTTCAACCCCAAAGCCCGCCTCATGCCAAACCCCATCAGCCACAAAATGCAACTCCTCAAACAACCGATGCCTTCGAAAATAGCACCACACAAAGTTATCACTCCACCGAAACCGATACTTATTAAAACGCCTAAAGGAGCTCAAAATAATCTGCCGTATCCTCTGCGCATAAAAGCGCTTAAAGAtttgcaaataaagaaaaaggaACCGCAAATTTTGAAGACCCTCCTAACGTCCAAACCAGAAGTTCTCGTGTCCGAACCTGAAATTGTTAACTCGGGCCCAGAAAGTCCCGAAACGTTGATTTCCGAACCAGAAATTGCATCTTTCCAAGTGGAAACCATTTTGTCAGAGCCGGATGGATTCGACCACCAGGGTGATGGTGATGAAGAAATGGACGGCGACATGACTAACAACCAAGGTCAAAACTATGACACGGTCGACATGGAATCGGACAACGAAATAGAGATAGCACGTGAGCAGGAGAATGAAGGAGAAGTTGAAGGTGAAGATGACGATAATAATGCCGAAGATGGAGAAGAACATAACCaaaatgatgaagaaatgaatcaCTTTGAGCAAAATAGTGAAAACGAGAAAGATCCAGCGGAGGAAAATGAACCAGAACACAATGAGGAGCATATCGGCATCGATGAAAGTGACCTTCAAGCTGCAGAGGAAAATCAAGAAAGAGAAGATGGAATCGAGGACGGTGATAATGATCATGAAATGAATCACGATGAGATTAGGGATGAAGATGACGATGATCTCCCTCCGATGGAAATAGCACCAGAAGTAGAAATAAATGAGGATATGCAAACAAATTCCTACAACAGTGAAGTTAATGAGGAGGAGGAGGAGGAACTTGAAGAATCTGCTGATCTAAATGACACAGCAGAAGAAGGCGTCAAAGAACTCGATCCTGACAAGTTGTACGTCACTAAAACACAAAGAGATTTCATTCTCAAATATCGCGACATCATCCAacaaatcaatacaaaacggtGTCTATGTTGTGATCGTGAGCATCCTCGGAGAAAGGCGGTCATCCAACATTTGCAAAAGAATGGACACAAAGTTCCTAAACACACCTGCTACAACTGTGTTATAACCTTCGGACACATTGGCGCCCTGCTCAGCCACATGAGGTCCAACAGTTGCACAGATTTATGGAAAATAAtctacaacgaaaatggaataACTGACGACCTAGTATTGGAAGAGCCAAAGGATAATAAAGTCCAGTATAAGGACATATTTAACGCAAGATCTTATGCTTGCAAATTATGTCCAGCCAAGTTCCAATTGAAGCAGTTCATAATGAAACATGTTTTGGATGTTCATGAAGATGGCCAGTCTAGGGTGCCCCTTCACTGCGTTCATTGTAGAGCACGATTCAAAGATAAAAGTCTTATCAAAAAACATATCCGTAACGGTGAATGCACAGTCATAATATCATGTGATTTGTGTTCTGAAAAGTTTGTCAATATGCAAGATTTCAATGATCACGCTTTGGCCGTTCATGCCGGAAGCTTTGACTCTGATAGTCAAAATAAGTGTGTTGATGGACGACCCACAGATTGTTCGCTTTGTGGAAAGAAGAATAGTAGCTATCCAAATTTGATAAAACATTTAAAGATGGTTCACAACGAGGATAAACCACATTATTGTCAACACTGTGATGGCAAATTTGAACAAGCTACTGATCTTAACAAACATATTTACACTGAGCATTCTGATAGGACCTTGGGTATGCAAAGCACCGAACCTGATATGTCCTTGGTCAAGGAAGAAGCTGAGGAATATCATTATTCGTGTACTGAGTGTAATGCCATATTTGAAACCGTTGACGCTTGGACGGATCACCAGGTCGCTGAACATAATCAAGTCGCTCATCATTGCGACCAGTGTGACAAGAAGTTCTTACGTCCATCTGAGCTCGCCGAGCATAAGAACACCCATCTGCGTGTCAAATTTTATCCTTGCAGCGTTTGTACAAATTCCTACAGTACTCCACAAAAACTTTCAGAACACGTTCAACAAGCTCACCCAGGCGCTGGGTCATTCCCGACGATGGATTCAGAGTTCTATTGTGACATATGCATACGATCATTCAAAAGTCGTCAAGCATATTCTAATCACATGCGCATTCATGCTAAAGTGCCCACGACCAATAGAAAACCCGGAGAACCAAAGGGTTTTGCTCCACAAATCATTGGCAAACCAATCAAATCGTTTACTGCCGTACAACCTGGTTTTGTAGCCTTCAAACCAAATTGTAACGTTCCTAATGCTCCTTACTGTTGTGATATATGCGGCAAAGGATTTATGCACAAGAAGAACATTTGGAAACACAAGAAAGTGCTTCACGCTGACCTCATCAACGATAGGAATGACAGTGAAGAAAATACCATGCAAGCGTCCACAGAAGACGATGAATATAATGCAGATGAAAGTGGAGCCATTCTGTCGACGCCACAGTTTAATAGTTTCAACTTCACAAACTTTGCCAATAACGTTCAACAATCGACGCCTCAGGGTCAAGATCTGCTGCCATTCTCGTGCGAACTTTGTTTCAAACGGTTTCCTCTTCGAACCAGTTTGTGGAAGCACAAGCGAGCCAAACATGGAATATCTGGATCTGATAACCAGCAGCCAAGCGAAGCCGGTAGCAGATCTAGTTGCACGATTTGTAAAATTACCTTTTCAGATAAGAAGTCATACTACCGTCACAGGAAGAATGTTCACAAATCGTCATCCCAGATGTGTAAGATCTGCGGCAAGCCACTGAATTCGACATTGGAGCTGTATGAACATCTCAAAGCTGCTCACGCACGCGAACTATTAGGCTATAATGCGAACCAAGGCAATAATAGCAAGATGCAGGATAACGAGCAAGAATTAGATGCAGATTACGAAAATGATCAAGATTCGGCGGACCCGAGTGTAGAATATCAAGCTAGATATCCTTGCGACACATGCGGCAAACAGTTCGTGGGAATGCTTGCGTTACAAAACCACCAGTGTATCAATCAGGTCCCTTCCCAACCGCAAACCTTCGACTGCGAAATCTGTCATAAGAGTTACACATCGATCGCGGCGCTCAAGAGCCACCGAGGCTGGCATCTGCGTTCGCCGGACGGCAAAGCGGCCGCCAACAACACCGGGCTTTGGATGCCTCAGCACAAAGTGACCAGCAAGGTCAGCAAACACGAGGTCGTCGATCCGGTCCAACTCGCCCGCGTGTCGCACTCGtcgcccgccgccgccgtcgcCGCCAAGCGAAGGTTACCACCGGAGGTCGAAGTGACGGTCGTAAACCCAAACAAAAAGTTGCGGTCGGATGACTCCGTAGAAATGGATCAGAACATGTCCGGCGGCGTCGAAGACAGATACTGCACGATATGCGACAAAGAGTTCACGAAGCGCGCCGCGTACCTTCGCCACATGGATGAGGTGCATCAACCCAACTCGGTGTTCTGTCCCGTCTGTGAGAAGAGTTTCACGCGGAAGTCGACTTTGCTGGTTCATATGAAGAAGCATTACGAAGGCGGCGAGGGTAGCTCGTCCGGGGCGGTCCAGGAGGAGGAGGAGAATCACGCGTGTGATTTATGCGGAGCTCAGTTTGACAGCGAGAAGGCGTTGAAGGCCCACCTGACGAGGCACCACGGGGAAGATTCGGGGGAGTCGGATGACGATGGTAGCGTGCCGGTGTCGCAGCCGGGCGAGTTTACATGTGGCCAGTGCGGCGACGGCGTTGCAACCCCGCGTGACTTGATCGCGCACCGCACGATGCACGCGACGCCCACCAAATTCGTCTGCAACATCTGCAAGGTCTACTTCGCCCGAGCCCTCGACCTGTCTTCTCACACTCGTGCGAGGCACGCGGACAACGAGAAGGTGTACTTCCCCTGTGCCATGTGTGACCGTTTCTACATGAACAAGAAGAGTCTGCAGCGACACATCGAGATGGCTCATTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIKDCVSVQISENDDLPTNVCRKCVDNVNNWHIFKTVCERTQNKLELLIKKDGSQLEEIKIKSEPADEAYDDGVVIDGSYPDNENAAGSSKVQPEGPPILASLGLTPRSDKKNVDPRMDWQRVHAILDMVQDDDVIDSLQSIEECDYVQESDHNSDSEAELQMDIDDEYIDCKTGYMCKNRTVLSKNPKLSTSLINAKIKEAARLRKHKIGTNKLCALPKKAWQMLFTDDLLELIVASTNDNILKAGNDISTSTNAGEIRTLIGIFYLHGIMRPTHQSTRDLWNKDCGIPCVRSAMKYERFKFLIQNMSFDKDDDDSIIQFDIMKRMRKVFEIFAMNCRTAYEVDNLVVIDEVIVPVYGPCPFRYNIDKKPLKRGLKMVLLVDSASFYIGNLDVITDHYFGADAIVNKMVQHLAGSGRTIIMDSWYSSLDLIDKLKKEYQLYSIAATHPNDDIIPPLFVSQYRKCKTFLTGFLDNDIALTSYMNSKKKSLNVLTNEPKFYKRGHKNFNTAAASYRKNQSAVEVIDVLMHYYTTMQHTNDWTLSLFFTLLNIAAVNAQVIWCSQNMHQVTKRRNFINELAFSLLESEDSFVADYPIDLNFQGIESEKEDEEEDDEEEMREPPQKYTKVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTSHSFDRYTNKVVNKKQPSHMQPKLRPNPFNPKARLMPNPISHKMQLLKQPMPSKIAPHKVITPPKPILIKTPKGAQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIVNSGPESPETLISEPEIASFQVETILSEPDGFDHQGDGDEEMDGDMTNNQGQNYDTVDMESDNEIEIAREQENEGEVEGEDDDNNAEDGEEHNQNDEEMNHFEQNSENEKDPAEENEPEHNEEHIGIDESDLQAAEENQEREDGIEDGDNDHEMNHDEIRDEDDDDLPPMEIAPEVEINEDMQTNSYNSEVNEEEEEELEESADLNDTAEEGVKELDPDKLYVTKTQRDFILKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPLHCVHCRARFKDKSLIKKHIRNGECTVIISCDLCSEKFVNMQDFNDHALAVHAGSFDSDSQNKCVDGRPTDCSLCGKKNSSYPNLIKHLKMVHNEDKPHYCQHCDGKFEQATDLNKHIYTEHSDRTLGMQSTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCTNSYSTPQKLSEHVQQAHPGAGSFPTMDSEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIIGKPIKSFTAVQPGFVAFKPNCNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLINDRNDSEENTMQASTEDDEYNADESGAILSTPQFNSFNFTNFANNVQQSTPQGQDLLPFSCELCFKRFPLRTSLWKHKRAKHGISGSDNQQPSEAGSRSSCTICKITFSDKKSYYRHRKNVHKSSSQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGNNSKMQDNEQELDADYENDQDSADPSVEYQARYPCDTCGKQFVGMLALQNHQCINQVPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVVDPVQLARVSHSSPAAAVAAKRRLPPEVEVTVVNPNKKLRSDDSVEMDQNMSGGVEDRYCTICDKEFTKRAAYLRHMDEVHQPNSVFCPVCEKSFTRKSTLLVHMKKHYEGGEGSSSGAVQEEEENHACDLCGAQFDSEKALKAHLTRHHGEDSGESDDDGSVPVSQPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFVCNICKVYFARALDLSSHTRARHADNEKVYFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961156;
90% Identity: -
80% Identity: -