Basic Information

Insect: Pyrausta despicata
Gene Symbol: -
Assembly: GCA_963921415.1
Location: OY992850.1:12129781-12138797[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0055 0.57 11.8 1.0 3 23 666 687 665 687 0.96

2 23 0.39 40 6.0 0.3 1 22 1074 1095 1074 1095 0.95

3 23 7.7 7.9e+02 1.9 0.3 1 22 1136 1157 1136 1159 0.82

4 23 0.059 6 8.6 2.2 2 21 1169 1188 1168 1189 0.94

5 23 1.5 1.5e+02 4.2 0.1 2 23 1197 1219 1196 1219 0.89

6 23 0.0069 0.7 11.5 0.1 3 23 1240 1261 1238 1261 0.96

7 23 0.018 1.9 10.2 3.1 1 23 1267 1290 1267 1290 0.95

8 23 0.14 15 7.3 0.0 1 23 1316 1339 1316 1339 0.90

9 23 0.0063 0.64 11.6 3.5 1 23 1344 1366 1344 1366 0.97

10 23 0.019 2 10.1 0.2 1 23 1372 1395 1372 1395 0.95

11 23 0.0012 0.12 13.9 1.3 1 23 1408 1430 1408 1430 0.98

12 23 0.0017 0.17 13.4 4.0 1 23 1479 1502 1479 1502 0.96

13 23 0.64 66 5.3 3.6 1 23 1564 1587 1564 1587 0.96

14 23 0.0013 0.13 13.8 2.1 2 23 1609 1631 1608 1631 0.95

15 23 0.099 10 7.8 0.1 2 23 1637 1659 1636 1659 0.93

16 23 0.011 1.2 10.8 0.2 1 21 1704 1724 1704 1725 0.95

17 23 0.0014 0.14 13.7 0.6 1 23 1735 1757 1735 1757 0.93

18 23 0.0004 0.041 15.4 0.2 2 23 1844 1866 1844 1866 0.93

19 23 3.8e-07 3.9e-05 24.9 1.4 3 23 1873 1893 1872 1893 0.98

20 23 0.013 1.3 10.7 0.3 1 23 1911 1933 1911 1934 0.95

21 23 0.14 14 7.4 0.0 1 23 1955 1977 1955 1977 0.97

22 23 0.031 3.2 9.4 0.6 1 23 1983 2006 1983 2006 0.95

23 23 0.00029 0.03 15.8 0.4 1 23 2014 2037 2014 2037 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0055	0.57	11.8	1.0	3	23	666	687	665	687	0.96
2	23	0.39	40	6.0	0.3	1	22	1074	1095	1074	1095	0.95
3	23	7.7	7.9e+02	1.9	0.3	1	22	1136	1157	1136	1159	0.82
4	23	0.059	6	8.6	2.2	2	21	1169	1188	1168	1189	0.94
5	23	1.5	1.5e+02	4.2	0.1	2	23	1197	1219	1196	1219	0.89
6	23	0.0069	0.7	11.5	0.1	3	23	1240	1261	1238	1261	0.96
7	23	0.018	1.9	10.2	3.1	1	23	1267	1290	1267	1290	0.95
8	23	0.14	15	7.3	0.0	1	23	1316	1339	1316	1339	0.90
9	23	0.0063	0.64	11.6	3.5	1	23	1344	1366	1344	1366	0.97
10	23	0.019	2	10.1	0.2	1	23	1372	1395	1372	1395	0.95
11	23	0.0012	0.12	13.9	1.3	1	23	1408	1430	1408	1430	0.98
12	23	0.0017	0.17	13.4	4.0	1	23	1479	1502	1479	1502	0.96
13	23	0.64	66	5.3	3.6	1	23	1564	1587	1564	1587	0.96
14	23	0.0013	0.13	13.8	2.1	2	23	1609	1631	1608	1631	0.95
15	23	0.099	10	7.8	0.1	2	23	1637	1659	1636	1659	0.93
16	23	0.011	1.2	10.8	0.2	1	21	1704	1724	1704	1725	0.95
17	23	0.0014	0.14	13.7	0.6	1	23	1735	1757	1735	1757	0.93
18	23	0.0004	0.041	15.4	0.2	2	23	1844	1866	1844	1866	0.93
19	23	3.8e-07	3.9e-05	24.9	1.4	3	23	1873	1893	1872	1893	0.98
20	23	0.013	1.3	10.7	0.3	1	23	1911	1933	1911	1934	0.95
21	23	0.14	14	7.4	0.0	1	23	1955	1977	1955	1977	0.97
22	23	0.031	3.2	9.4	0.6	1	23	1983	2006	1983	2006	0.95
23	23	0.00029	0.03	15.8	0.4	1	23	2014	2037	2014	2037	0.96

Sequence Information

Coding Sequence: atgaGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCCACCACCAGTTCGGATGACTCGGATCCTCCCGTCCTTGCTTCGAAAATCAAGGATTGTGTCTCAGTTCAGATAAGCGAGAATGACGACTTGCCAACGAATGTCTGCAGGAAATGTGTGGATAATGTCAATAACTGGCATATTTTCAAGTCAGTGTGTGAAAGGACTCAAAACAAACTAGAGTTGCTGATAAAAAAGGATGGCAGCCAACTAGAAGGGATCAAAATAAAGAGTGAACCATTATCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGATCATATCCTGATAATGAGaaTGGTGCTGGATCTAGTAAGGTGCAGCCAGAAGGTCCACCTATCTTGGCGTCATTGGGGCTCACTCCACGAAGTGATAAGAAAAATGTAGACCCCCGTATGGACTGGCAACGAGTCCATGCAATATTGGATATGGTGCAAGATGACGATGTGATTGATTCACTTCAGTCACTTGAAGAGTGCGATATTGTGGAGCAGTCTGATCATAACTCCGAATCAGAAGCTGAGCTACAAATAGACATAGATGACCAATTCATAGACTGTAAGACTGGGTACATGTGTAGAAATCAGAAAGTCCTTTTTAAAAACCCAAAGCTCTCAACAGCTGctataaatttgaaaataaaagaagCTTCCAAACTGAGAAAAAATAAGCAAAGAACACAAAAATTGTGTGGCCGACCTAGACAAGCATGGCAATTGCTCTTCACAGATGACTTGCTTGACTTAATTGTTGCATCAACTAATGATAGCATTCTCAAAACTGGAAATGACATTACCACTTCAACTAATGTTGGGGAAATAAAAACACTCATTGGAATATTATATCTGAACGGAATAATGAGACCGACTCACCAAAGTACACGTGACCTTTGGAATAAAGACTGTGGAATACCATGCGTCAGAAGCGCAATGAAGTATGAGCGATTCAAATTCCTTATCCAGAACATGAGTTTTGATAAGGATAATGATGGCAGCCTAATACAGTTTGATATAATGAAACGGATGCGCAAAGTATTTGAAATATTCGCAATGAACTGCAGAACTGCTTATGATGTTGATAATATGGTTGTTATTGATGAGGTCATTGTCCCAGTTTATGGGCCTTGTCCATTTCGGTACAACATTGATAAGAAGCCGCTAAAACGTGGCTTGAAAATGGTGCTTTTGGTTGATCCATCCAGTTTTTACATCAACAATTTAGATATAATAACTGATCATTATTTTGGACCTGAGGAAATTGTCAGTAAAATGGTACAGCACTTGGCGGGATCTGGGAGAACTGTGATGATGGACAGTTGGTATACTTCATTGGAATTGATTGAAAAGCTCAAGAGTGAATATCAATTGTTTTCTATTGCGTCCGCGCATCCGGGCGCTGACATCATACCTCCACTATTTATGTCTCAGTACAGAAAATGTAAGACATTCTTGACTGGATTTCTGGACAGTGATGTTGCTATGACGTCGTATATGAATTCTGAGAAGAAGTCACTGAATGTGTTGACAAATGATCCAAAGTTTTATAAGAGGGGACATAAGAATCACAGTACAGTGACTGCTTTGTATAGGAAGAACCAATCCGCTGTGGAAGTGGTTGATGTACTAATGCACTACTACAGTACTATGCAGCACACCAATGATTGGACCCTGTCTTTATTCTTCACTCTTCTTAACATTGCTGCAATCAATGCCCAAGTCATATGGTCTTGTCAAAACTTGAATGAAGGCGTTGAAAGCGAGAAAGATGACGAAGATGAAGAGGACGAAGAAGAGATGAGGGAGCCGGTGAAAAAGTATCCTACTAAAGTTCCCAACATGCCTGAAGTGTCTATCACGGTAATGCGTCCCACCGGGGAGACTTTGCACGCCCGTCAAGGCATCCAACAACTGGCCTCCAAAGACTGCCTCGTGTGCGGCCGGTCCTACAGGTACTCCCACAATGCCAGGCGACACGAGCTCACCGCTCACAGCTTCGATAGGTACACCAACAAAGTGTCACACAAGAAACAACCTTCACACATGCAACCAAAATTGAGACCAAATCCATTTAATCCTAAGGCACGGCTCATGCCCAATCCTATTAGCCATAAAATGAAACTACTCTCGAAACCGATGTCATCGAAAATGATACCGCACAAAGTTATTGCTCCACCGAAACCGCTCCTCGTCAAAACGTCTAAAGCAGGAGCACAACATAACTTACCCTACCCTCTTCGTATAAAAGCACTGAAAGActtacaaataaagaaaaaggAACCGCAAATCTTAAAAACACTTCTTACATCCAAACCCGAAGTTCTCGTGTCTGAACCTGAAATTGTGAATTCTGGTCCTGAGAGTCCCGAGACTTTGATTTCTGAGCCAGAAATTGCGTCTTTCCAAGTGGAAACCATATTGTCTGAGCCCGATGCCTATGACCAGCAACAGGGCGAAGAAGAAATGGACGGCGATATGACCAACAACCAAAGTCAAAACTACGACACAGTCGACATGGAGTCTGATAATGAAATAGAAATCGCGCGTGAACAGGAACAAGATAACGAAGGGGATGAAGAAGAACACAACGGAAATGACGAAAACAACCACATTGATGAAGATATCAATGACTACGAAGGGCAAAGTGATAATGAGAAGGATCACGCCGAAGGGAATGATGTTGAAGAAAATGATGAGCACATTGGTATTGATGAAAGTGATATCAAAGCAGCAGAAGAAAATCAAGTAAGAGATGATGCTTTTGATGAAGTTGACAACGAAGAGCCTGAGATGAACCATGACGAGAATCAAGAGGAAGAAGACGAGGAACTTCCTCCAATGGAATTAGCTCCTGTAGTAGAGATAAACGAGGATATGCAGACGAACTCTAACAACAGTGAAGTCAATgaggaagaagaagaggaaCTTGAAGAAACAGCTGAATTAAACGATACGGCTGAAGAAGAGGGTATCAAAGAACTCGACCCTGACAAATTGTATGTGACAAAAACTCAAAGGGACTTCATTCAAAAGTATCGTGACATTATTGAACAAATCAATACAAAACGTTGTTTATGCTGTGACCGCGAACACCCGCGAAGGAAAGCAGTCATCCAACATTTGCAAAAGAATGGACATAAGGTACCTAAGCATACCTGCTACAATTGTGTAGTAACGTTCGGACATATTGGCGCGCTGCTCAGTCACATGAGATCCAATAGTTGCACCAACTTGTGGAAAATAATCTACAACGAAAATGGAATTACTGATGACGTAGTAGTAGAAGATCCTAAGGACAACAAAGTTCTCTATAAAGACATTTTGAATGCAAGGTCGTATGCCTGTAAATTATGTCCAGCTAAATTCCAGTTGAAACAGTTTATAATGAAACACGTTTTAGATGTTCACGAAGATGGCCAGTCTAGAGTGCCTCTCCATTGCGTGCATTGCAGGGCAAGGTTCAAAGATAGGAGTCTTATTAAGAAACACATACGCAACGGTGAGTGCACAGTGATCATTTCATGCGATATGTGTTCAGAGAAGTTCGGAAATATACAAGATTTCAACGATCACGCCTTGGCTGTTCATGCCGGAACCTTTGACCAATCTGATAATCAAAGCAAGTGTGTCGACGGGAGACCTACAGATTGTCCGATTTGTGGAAAGAAAAATAGTAGCTACCCTAATTTGGTGAAACATTTGAAGATAATTCACAATGAGGAAAAACCTCATTACTGCCAGCACTGCGACTCCAAATTCGAACAAACTGCCGATCTAAACCAACACATTTACATGGAACATTCTGATAGAAGTTTAGGTGTACAAAGCACCGAACCTGACATGTCCTTGGTGAAGGAAGAAGCTGAGGAGTATCACTATTCGTGCACAGAATGTAATGCCATATTCGAAACCGTCGACGCTTGGACTGATCATCAAGTCGCTGAGCATAACCAAATAGCTCACCACTGCGACCAATGCGACAAGAAGTTCTTGCGTCCGTCCGAGCTCGCCGAGCATAAGAACACCCATTTACGTGTCAAGTTCTATCCTTGTAGCGTTTGTACCAACTCCTACAGCACTCCACAAAAACTGTCCGACCACGTCCAGCAGGCGCATCCCGGCGCTGGTGCATTCGCTTCGACGGAGTCTGAATTTTACTGTGACATATGCATCAGATCATTCAAAAGTCGTCAGGCGTATTCCAATCATATGCGTATTCATTCTAAAGTCCCCACAACCAATAGAAAGCCTGGGGAACCAAAATCGTTTGCACCGCAAATTATTGGCAAACCTATCAAACAGTTCACTGCCGTACAACCTGGTTTCATGGCATTCAAACCCAACTTGAATGTTCCGAACGCTCCGTATTGTTGTGATATTTGTGGTAAAGGATTTAtgcataagaaaaatatttggaaACATAAGAAAGTACTGCATGCTGACCTTCTCAATGACAGGAATGACAGCGAGGAAAACACGATGCAAGCGTCGACTGAAGACGATGAATATAACGCCGATGAGAATGGAGCTATCCTTTCGACCCCTCAgttcaatagttttaatttcacgaaCTTCGCTAATAACATGCAACAACAAACGCCCCAAGCAGATCCGTTGCCGTTCTCTTGCGAACTTTGTTGTAAACGTTTCCCACTTCGAACCAGTTTATGGAAACACAAAAGGGCAAAACATGGAATATCCGGCTCGGATAACCAGACACCGGACGAAGCCCGGAGTTCAGCAGGCAGCAGGTCGAGCTGCACGAtttgtaaaattacattttctgacaaaaaatcTTACTACCGTCATAGAAAGAATGTCCACAAATCATCATCTCAGATGTGTAAGATTTGCGGCAAGCCATTGAACTCGACTTTGGAGTTATATGAACATCTCAAAGCTGCTCACGCTCGGGAATTGTTGGGCTATAACGCGAACCAAGGTAACAATAGCAAAATGCAAGACAACGAACCAGAATTGGACCCAGACTACGAGAATGACCAAGACTCGGCAGATCCGAGTGTAGAATATCAGGCGAGGTATCCTTGCGATACATGCGGCAAGCAGTTCGTCGGTTTGCTTGCGTTACAAAACCATCAATGTATCAACCAGGTTTCATCGCAACCTCAAACTTTCGATTGCGAAATCTGTCATAAGAGCTACACATCGATTGCCGCGTTGAAAAGCCACCGGGGCTGGCATTTACGTTCGCCTGATGGTAAAGCGGCCGCTAACAATACTGGTCTATGGATGCCCCAGCACAAAGTGACCAGTAAGGTCAGTAAACATGAGGTCGTCGACCCCGTTCAGCTTGCCCGCGTGCAGCATTCGGCTCCTGCCGCGAGTGTAGTCAAGAGAAGATTACCACCGGAGGTAGAGGTGACAGTCGTAAACCCGAATAAAAAGATGCGATCGGGCGACTCTGTAGATATGGACCAAAGCTCAGCCGTTGAGGATAGGTACTGCACGATATGCGACAAAGAGTTCACGAAGCGAGCCGCATACCTGCGGCACATGGACGAGGTGCACCAACCTAATTCAGTGTTCTGCCCCGTGTGCGACAAGAGTTTCACGCGGAAGTCGACTCTTTTAGTTCATATGAAGAAGCATTATGAAAGTGGCGAGGGGAGTTCGTCCGGGATGGCTCAAGAGGAGGAGGACTATGCGTGCGACTTATGTGGGGCGCAGTACGACACCGAGAAGGCGTTGAAGGCCCACAAAGCGAGACATCACGGCGAGGAATCCGGAGAGTCTGAGGATGATGGGAGCGTGGCTGTTTCCCAACCGGGGGAGTTTACCTGTGGTCAGTGCGGCGACGGTGTGGCGACCCCGCGTGATCTGATAGCCCACCGCACCATGCACGCGACCCCGACAAAATTCTTCTGCAATATATGTAAAGTGTACTTTGCCCGCGCCCTCGATTTGTCCTCGCACACGCGCGCGAGGCATGCAGACAACGAGAAGGTATTTTTCCCCTGTGCCATGTGTGATCGTTTCTATATGAACAAGAAGAGTTTGCAGCGACACATTGAGATGGCTCATTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSDPPVLASKIKDCVSVQISENDDLPTNVCRKCVDNVNNWHIFKSVCERTQNKLELLIKKDGSQLEGIKIKSEPLSDEAYDDGVVIDGSYPDNENGAGSSKVQPEGPPILASLGLTPRSDKKNVDPRMDWQRVHAILDMVQDDDVIDSLQSLEECDIVEQSDHNSESEAELQIDIDDQFIDCKTGYMCRNQKVLFKNPKLSTAAINLKIKEASKLRKNKQRTQKLCGRPRQAWQLLFTDDLLDLIVASTNDSILKTGNDITTSTNVGEIKTLIGILYLNGIMRPTHQSTRDLWNKDCGIPCVRSAMKYERFKFLIQNMSFDKDNDGSLIQFDIMKRMRKVFEIFAMNCRTAYDVDNMVVIDEVIVPVYGPCPFRYNIDKKPLKRGLKMVLLVDPSSFYINNLDIITDHYFGPEEIVSKMVQHLAGSGRTVMMDSWYTSLELIEKLKSEYQLFSIASAHPGADIIPPLFMSQYRKCKTFLTGFLDSDVAMTSYMNSEKKSLNVLTNDPKFYKRGHKNHSTVTALYRKNQSAVEVVDVLMHYYSTMQHTNDWTLSLFFTLLNIAAINAQVIWSCQNLNEGVESEKDDEDEEDEEEMREPVKKYPTKVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKVSHKKQPSHMQPKLRPNPFNPKARLMPNPISHKMKLLSKPMSSKMIPHKVIAPPKPLLVKTSKAGAQHNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIVNSGPESPETLISEPEIASFQVETILSEPDAYDQQQGEEEMDGDMTNNQSQNYDTVDMESDNEIEIAREQEQDNEGDEEEHNGNDENNHIDEDINDYEGQSDNEKDHAEGNDVEENDEHIGIDESDIKAAEENQVRDDAFDEVDNEEPEMNHDENQEEEDEELPPMELAPVVEINEDMQTNSNNSEVNEEEEEELEETAELNDTAEEEGIKELDPDKLYVTKTQRDFIQKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTNLWKIIYNENGITDDVVVEDPKDNKVLYKDILNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPLHCVHCRARFKDRSLIKKHIRNGECTVIISCDMCSEKFGNIQDFNDHALAVHAGTFDQSDNQSKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEEKPHYCQHCDSKFEQTADLNQHIYMEHSDRSLGVQSTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCTNSYSTPQKLSDHVQQAHPGAGAFASTESEFYCDICIRSFKSRQAYSNHMRIHSKVPTTNRKPGEPKSFAPQIIGKPIKQFTAVQPGFMAFKPNLNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMQASTEDDEYNADENGAILSTPQFNSFNFTNFANNMQQQTPQADPLPFSCELCCKRFPLRTSLWKHKRAKHGISGSDNQTPDEARSSAGSRSSCTICKITFSDKKSYYRHRKNVHKSSSQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGNNSKMQDNEPELDPDYENDQDSADPSVEYQARYPCDTCGKQFVGLLALQNHQCINQVSSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVVDPVQLARVQHSAPAASVVKRRLPPEVEVTVVNPNKKMRSGDSVDMDQSSAVEDRYCTICDKEFTKRAAYLRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYESGEGSSSGMAQEEEDYACDLCGAQYDTEKALKAHKARHHGEESGESEDDGSVAVSQPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961156;
90% Identity: -
80% Identity: -