Mcon005260.1
Basic Information
- Insect
- Mamestra configurata
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_002192655.2
- Location
- NDFZ01004996.1:2-4664[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-16 1.5e-12 48.0 5.7 203 295 1 85 1 87 0.81 2 2 1.1 1.5e+04 -4.5 18.3 1 50 86 134 86 159 0.72
Sequence Information
- Coding Sequence
- GCGCTGGTGACGCACCAGGCGCACCAGCTGCTCAATGATGCGGGGGAGGGCACGCTCGACGTACGGTTGCAAAAGCTGCTGAGTTCGAAGCAGGCGCTAGAATCCGAAGTCCGCAAGCTGAAGCTACAGCTGAACGAAGAACGCGCCGCAAGACAGAACGGAGTGACCAACCATCACGACCAAGAGTACGAGAATGAATTGGAGACAGTCCGCAAGGCGGTGTCGGAGGCGAAGGGGCGCGCCGCCCGGGCGGAGGCCGAGGCGGCGCTGCAGGCCGCGCACGTGGCGCGCCTCGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGCTCGGGAAGCTCTCAACCGGGTTGAAGAGTTGGAGACGGAGAACAGCCATCTCACGAAACGACTCGACAAGCTCAAGAACGCCAAGTCTGCGCTCCTCAAAGACCTGTGA
- Protein Sequence
- ALVTHQAHQLLNDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELETVRKAVSEAKGRAARAEAEAALQAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01334918; iTF_00172981; iTF_00172977; iTF_00172978; iTF_00172979; iTF_00172980;
- 90% Identity
- iTF_00172977;
- 80% Identity
- -