Mgen032744.1
Basic Information
- Insect
- Malaya genurostris
- Gene Symbol
- -
- Assembly
- GCA_030247185.2
- Location
- CM058073.1:159246479-159252104[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3 5.9e+03 -1.7 0.0 14 26 409 421 403 422 0.89 2 5 1e-10 2e-07 31.8 0.0 2 39 463 501 462 505 0.90 3 5 6e-12 1.2e-08 35.8 0.1 2 39 517 554 516 557 0.94 4 5 9.1e-18 1.8e-14 54.4 0.0 3 45 573 616 571 616 0.97 5 5 5e-17 9.7e-14 52.0 0.0 1 43 623 666 623 668 0.96
Sequence Information
- Coding Sequence
- ATGCTGGGATTTCCACTCAGTACGTTAAACTGTGAGGTTAATCTAAATAACTTCTCCGAAGATCCGTATCTGATGAGCCTTTTGAGAACTGCAGAGCAACTAAAGATTAAAGGGTTGTGTGAAGTAAGTGAACCACAATACGAACAGGATTTCTCGCCATCAATCAAGCGTTACAAGCCCTACCGTTCACGATCCCCAGACAATCGTCATCCACCTCCTCCGGGATCATTATCAACAAACGCACGAAGCAACAATTCTGCATCCTCGCAAAGCAACAATAACCAAAGTGGACAGGATTCCAAAAGTGGCCATAAGTCATCCTCCGGTAGAAGCCATAGCAGTAATTCAGAATCGGCTCCGGCAGATAATGGATCTTCGCCTGTAGTCGTGCTAGAATCACGTGATTTAACATCGACTCCAGGCAAGGAAGGAAAAGGAAAAATGACCAGTCTTGGAATGGGAGTTGGAATAAACGGCTCCGTTATGGGTGTCTCGATGGGATACTTGGATTTCGCTCCGGAACCACCAGCACCAACGGCAACACCGGTGACAGAACATGTTGATATCAATTGTGCTCCTAGCCATGACACACGTGATCTGTCCAGTAAGTattcaatctcaaacaatggTGATATTCGAGTGAAATTCGAAACGCTCCGGTCACTTGATCCACAAGATGCAATACAGTTGGACAACCAAGTTGCACACCAGATGCATTCGCAAGCCCAGCAACAGTTACAACACCAGCAAATGTTgcaccaacaacagcaacagcatatattacaacaacaacatcaacaacagcatcaacaacagcagcagcaccagcagcaacaacagcaacaaacgCACCGGCAGACACCTCAGCCTCAACAAGTGGATCAGCGAATGTCGCCTCACCAGCCTTCGCCTCAGCAACCTcctcaacatcaacaacacGTTCTCCTAATCGATCAACAATCGCAACACTCACACCTCTCCACCCATAGTCCAGCGTCCAACGCTTCGAGTTCGTCTAGCCAACATCATCCGGAAAATTTGGTTACAGTCGCGTCTACTACGGCCGACAATAGTACGCAAATGGAAATGAAAACGCGAATTACACTTAAACaggaaattatgactgaagtaGAAcaccagcaacaacaacagcaacaccaGCAACAGATGGAAGTGGAACAGGACCAATCGTCTATGCACGGAATGGTCGTAACACCAGAGATCTCAGGAATGATGACTCAGAGCCAAATGAGTGATATCTATCAATCAGATGCCAGTGAAGATTCAAAAGTTGGTATTCTTGACGGTTCCGCGATGCAGTACACAAATCTGACAAGTCCAAATGCTAGTGATCCCAAGACACCTAGTGGTCCAAAGACTTGGACGGCAGAGGACATGGAATCAGCATTGGatgcactgcgcacccataacaTGAGTTTAACAAAGGCTTCCGCTAcgtatggcataccttcaacaACACTGTGGCAGAGAGCACATCGACTAGGTATCGATACACCGAAGAAGGAAGGACCATCTAAAACGTGGAACGAAGACTCATTGAACAGTGCCCTGGAAGCATTGCGCACCGGAACGATATCGGCCAACAAGGCATCGAAGGCTTTTGGTATTCCCTCTTCAACTCTTTACAAAATTGCCCGACGCGAGGGTATTCGACTGGCGGCACCGTTCAATGCAGCGCCCACTACATGGTCTGCGGAGGATTTGGACCGTGCCTTGGAAGCGATCCGTGCTGGTCAAACTTCCGTTCAAAAGGCAAGTACGGAATTTGGTATTCCAACTGGTACACTTTACGGGCGATGCAAGCGAGAAGGAATCGAGCTATCGCGATCAAACCCTACACCCTGGTCTGAGGATGCAATGATGGAAGCCTTAGAATCTGTGAAACAAGGACACATGTCGATAAACCAAGCTGCCATCCATTACAATTTGCCTTACAGTTCACTGTATGGCAGGTTTAAGCGTGGTAAATATGACACACCAAACAGCGCTAATTCTTCACACTCTAATCACGGCGGTGGAGGCGCGGGCGGAGGCGGTAACGTCGGCGGCATCGGTGGAATCGGAAGTAATGTGGTGACAACTGCGGCAACGATGGCCGGCGTTACCAGCAGTCCGCAAATGGAATTTAAAATAGAACCTCAACATAATGAGCATAGTCCAGAGAATACGCAACATTATAATCCTGCGCTAACAACATCACTAACAACGTCGTCCGCGCCGCCATCAACACAAACCCACCACGTTGTACCGTCACCATCGCCAGTCAACATTCACATCATTAACGCcaatcatcaccatcatcagcTGCAACCGACACCGCCGCCACATCAAACTATAGCGACGACGCATCACACACTGCAAGGAGCGCAACCGCAGCTGATCCAACATCACATCATTCCGCAGCAGCACCACATCATCTATCAGCAGCCGCTGCAACAACTTCAACAACAACCGCAGTATCATCCGATGTATCACATCATCAAACAAGAAAACGATAGAAGTTGA
- Protein Sequence
- MLGFPLSTLNCEVNLNNFSEDPYLMSLLRTAEQLKIKGLCEVSEPQYEQDFSPSIKRYKPYRSRSPDNRHPPPPGSLSTNARSNNSASSQSNNNQSGQDSKSGHKSSSGRSHSSNSESAPADNGSSPVVVLESRDLTSTPGKEGKGKMTSLGMGVGINGSVMGVSMGYLDFAPEPPAPTATPVTEHVDINCAPSHDTRDLSSKYSISNNGDIRVKFETLRSLDPQDAIQLDNQVAHQMHSQAQQQLQHQQMLHQQQQQHILQQQHQQQHQQQQQHQQQQQQQTHRQTPQPQQVDQRMSPHQPSPQQPPQHQQHVLLIDQQSQHSHLSTHSPASNASSSSSQHHPENLVTVASTTADNSTQMEMKTRITLKQEIMTEVEHQQQQQQHQQQMEVEQDQSSMHGMVVTPEISGMMTQSQMSDIYQSDASEDSKVGILDGSAMQYTNLTSPNASDPKTPSGPKTWTAEDMESALDALRTHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTPNSANSSHSNHGGGGAGGGGNVGGIGGIGSNVVTTAATMAGVTSSPQMEFKIEPQHNEHSPENTQHYNPALTTSLTTSSAPPSTQTHHVVPSPSPVNIHIINANHHHHQLQPTPPPHQTIATTHHTLQGAQPQLIQHHIIPQQHHIIYQQPLQQLQQQPQYHPMYHIIKQENDRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00400481; iTF_01471273; iTF_01461802; iTF_00401619; iTF_00401857; iTF_01524606;
- 90% Identity
- iTF_01461802; iTF_01524606;
- 80% Identity
- -