Basic Information

Gene Symbol
CAMTA2
Assembly
GCA_949089665.1
Location
CARXXK010000002.1:68128863-68159325[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.9e-35 2.7e-30 106.4 1.6 40 116 2 76 1 76 0.97
2 3 0.22 1.6e+04 -2.5 0.0 17 44 558 585 551 608 0.78
3 3 0.052 3.7e+03 -0.4 0.0 34 63 946 977 932 990 0.64

Sequence Information

Coding Sequence
ATGTTATTGTACAGCAGGAAGAAAGTGCGATACAGACGTGATGGATATTGttggaaaaaaagaaaagacGGCAAGACTACTCGTGAAGACCACATGAAGTTGAAAGTCCAAGGAACCGAGtgcatttacGGGTGCTATGTACATTCAGCGATACTTCCAACATTTCACAGAAGGTGTTACTGGTTATTGCAAAACCCTGATATGGTGTTGGTGCACTATTTGAATGTACCGTATCCAGACGACAACAAATTATCGGTAATTTCGCCGAGCCTCGCACTGTGGGCTGATCGTAAAGAGTGGACGAAAGATGAATTACTATCTCAGTTGAAACCCATGTtttacGAGGAAGACCCTGACCTTAGCAACGAAATGGAAGTATCGACGGCCGAATGCGTAGCCGCCATGGTCACACAGCTGATGGAGTGGCAGAAGAACGCCAGGGCGACTCTACTTAGCCGAACGCTGGAATGCGGATGTCCGGACTCCACGTGCGCGGACGGACAATCGTGCTCGCGCCCGATCAGACGGATTTCGCCGTCAGACAGCAATCAGGTGTCGTCGACAACTGGAAATCGATCGCGCCCCGGTACAATGTTACTCACCAACCACCACGTTAACTCGTCCAGGACCACGATGAACACGTTAATGATCGCTAATCACGTCAATCATAAGGCACAAAGTGGGCCAACCTCCTTGAACACCACATTGAACAACAACTTGTTGTCAAATTCCACGAGGGATTTTCGCAATCAACCACAACAACAGCAACcgcaacaacaacaaataattcTCAAGCACGATTGCagagataacaatcaaatattaaacaacAGACAACCACCGATCAACGTGACGGACAATAATCACATTCCCACTACAATGATATCGTATAAGCCACAAGGTTCAGACGAAGTGATCCACGTGTATACCGAAAAACAAACGTATCACACTTCGCAAAATCAAGACGAGCACGCTGTACACTTGTTCCACGGACAAGATCATCTAAAACAACAGTCAGACCACGTAAAATCGGAATTCTATGATGTCACATTAGATTTGTCCCACGATGACATACAACAGACGCTTTCAGCCAATATGCCTGTCTCGTGTGCCAATGCTGATCAATTGCTACgaTTGGATGACGATCATAGTAATAAAAATCTAGACGGGCATGGAGACGATGTATTTGTGAGTCTCGATGCGTTTGATATGCTTACTGACTTCCAAGAACTTGATATCCTAGAACATGCAACGCAACATGCTTCAAATTTGGTTACGGAAATAGGAACAAATGCAGCGGATATGCAGCCACACGGGCAACCACAATTAGACATGGACGTACTACAAATAACTGATTACTGTCCTGAATGGGCATTTCCTGAGggaGGCGTTAAGGTACTAATCACGGGACCTTGGTTTTCTTCCTCTTCATACACTGTTATGTTTGATACGATCACAGTTCCAAGCACTTTGATTCAAGGAGGTGTCTTACGATGTTACTGTCCAgCTCATGATATAGGCACCGTTACATTGCAAGTAGTCATTGATGGCAGGCCAGTATCTACCACCGCGATATTTGAATACCGTCAACATGAATTCCCACTAACTATTTCCTCATTATCAATGTCACATACACCATCCCTACTCAAGTTTCATTTGTTACAAAAACTTGACTCCATCGAAGATTACTTACAGCAGCCGAGCAATCAACAAACAGACCAACCATTaaaagATAGTATCGTTATGTTTAGCAAGCCCAACTTTGAAGATCAGCTTgtaaattattgtgaaaaaatgAAACAGTTTTCGTGGAAATCTGAATCTGAATGTAACGTTAAGCAATTAGAAACCGAAACCACTATTTTACATATGGCTGCTTTTTTGGGATATTCTAAACTTGTGTGCATACTACTTCAATGGAAATTAGAAAACGTGTCACAGTTTTTGGAAATGGAAGTCAATGTTTCAAAACAAGATCGTGAAGgatatacgccactgATGTGGGCTTGTAAAAAAGGACACAAAGATACAGCAGTTTTACTGTGTCAGTGGTATCAAActgttcaaaattcaaataacaattttaatcagGATTACTCTCAACCCGATATATTAGAATCCGTTCATCAGTATTTCAACGATTTCAATCAAAATCAGTACTGCACCAATGACAATTCAAGTAACGATGTATTTTTAAGGCCCGATGGaatcaatagTGACGTTAAGAAAGAAATTAATCAAACCACCGATGAGCCAAATAATCCAATACCACCGCCTAATAAATCTGTtaccatattatGTTCAAAAGGGGAAACCAAACCagataaaaacgaaataaaaccACAAGAAACTCAAGGTTCCAAAAGACCATTACCCAATAGCTTCTTCCAAACGGATGACTATTACGATCAATTTTGCAAACCATCACTCTATTTCCCATCtattcaaaaGTTCCAAAAGAGTTTGTTTCTTCCACTACAATCTCCTACATCGGATAGCGGAAATTCGTCCGAAAAATCACCAGTATTAACAAAGtctgattttataatttGCATGGTAACCGCGCTGGCCGATGGACCGGCGGACGGAGCCGTGGGTAGTGAGAACGATGGCAATGGTAACACGCGATCCGACGAACGTCAGAACGATGAACGAATCGAAGACGCTGTTCAAACGCCCAAAGATCCCGCTGAACACGGGGAACACGATGTTCGTGTTTTAACATTAGCCGAACAATTCATAGCGGCTATGCCTGATCATattaagAATGAAAACGGATCACATGGTAAAATTGTAGAATCATCAATTATTACAATGGAAGTGCTCGACGATCCTCCGTCATCTGTGTCGTCATGTTGTTTTGATACCAACTCTGAAATGAACACGGAATTCAATGAACATGTTTATCATTATCGGCAAAAAGATCGAGAAATAGAAACACCCACCTCCAGCACCAGTTTAACCTTAAGTCCAGTGTCGAGTGCATCACAATGTTCGCCCGCATCACCACCACCGACTGCTGCAGATCTATGTGAATTTCTCCATGCTTCGTCAAAcaatcaatattttgaaaagaattTTTCGAACCTTACACTGTCCGATTACGAACAACGGGAATTATATGAGGCGGCCAAGACTATTCAGAAGGCGTACAGAACGTACAAAAAAAGAGAAGAGGATAAAGAAATTTCAGCTGCTTCGgtcattcaaaattattatcgcCGTTACAAACAGTATGCATATTACAAGCAGATGACAAAAGCTGCTATTCTAATTCAAAATCAGTACCGTATATACAGAAGACATAAGCGGTTTAAAAAAGAAACTCCTTGTTACACTAATAACACGTTCACTGTTATTAAaaaaaatcaaaatcaaaaacgtCAAAACCAAGCAGCTcgaaaaattcaacaatttatgCGACAGTCCAAGCATGGtacGTCTCCTCCTGCCACTATCAACGAACGCACTTTTGGATCTCGTAAGCGAGAAGCTAATGGTAATCACAATATGAAATATCCTCCGACAAAAGTGGCCCAATACTCGACACTCAACCACAACTGA
Protein Sequence
MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDMVLVHYLNVPYPDDNKLSVISPSLALWADRKEWTKDELLSQLKPMFYEEDPDLSNEMEVSTAECVAAMVTQLMEWQKNARATLLSRTLECGCPDSTCADGQSCSRPIRRISPSDSNQVSSTTGNRSRPGTMLLTNHHVNSSRTTMNTLMIANHVNHKAQSGPTSLNTTLNNNLLSNSTRDFRNQPQQQQPQQQQIILKHDCRDNNQILNNRQPPINVTDNNHIPTTMISYKPQGSDEVIHVYTEKQTYHTSQNQDEHAVHLFHGQDHLKQQSDHVKSEFYDVTLDLSHDDIQQTLSANMPVSCANADQLLRLDDDHSNKNLDGHGDDVFVSLDAFDMLTDFQELDILEHATQHASNLVTEIGTNAADMQPHGQPQLDMDVLQITDYCPEWAFPEGGVKVLITGPWFSSSSYTVMFDTITVPSTLIQGGVLRCYCPAHDIGTVTLQVVIDGRPVSTTAIFEYRQHEFPLTISSLSMSHTPSLLKFHLLQKLDSIEDYLQQPSNQQTDQPLKDSIVMFSKPNFEDQLVNYCEKMKQFSWKSESECNVKQLETETTILHMAAFLGYSKLVCILLQWKLENVSQFLEMEVNVSKQDREGYTPLMWACKKGHKDTAVLLCQWYQTVQNSNNNFNQDYSQPDILESVHQYFNDFNQNQYCTNDNSSNDVFLRPDGINSDVKKEINQTTDEPNNPIPPPNKSVTILCSKGETKPDKNEIKPQETQGSKRPLPNSFFQTDDYYDQFCKPSLYFPSIQKFQKSLFLPLQSPTSDSGNSSEKSPVLTKSDFIICMVTALADGPADGAVGSENDGNGNTRSDERQNDERIEDAVQTPKDPAEHGEHDVRVLTLAEQFIAAMPDHIKNENGSHGKIVESSIITMEVLDDPPSSVSSCCFDTNSEMNTEFNEHVYHYRQKDREIETPTSSTSLTLSPVSSASQCSPASPPPTAADLCEFLHASSNNQYFEKNFSNLTLSDYEQRELYEAAKTIQKAYRTYKKREEDKEISAASVIQNYYRRYKQYAYYKQMTKAAILIQNQYRIYRRHKRFKKETPCYTNNTFTVIKKNQNQKRQNQAARKIQQFMRQSKHGTSPPATINERTFGSRKREANGNHNMKYPPTKVAQYSTLNHN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2