Msac006377.1
Basic Information
- Insect
- Melanaphis sacchari
- Gene Symbol
- CAMTA2
- Assembly
- GCA_002803265.2
- Location
- NW:116191-225093[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.6e-48 4.2e-44 148.4 2.9 3 116 70 181 68 181 0.98 2 3 0.083 9.7e+02 -1.1 0.0 38 62 1059 1083 1040 1095 0.61 3 3 0.45 5.2e+03 -3.5 1.3 67 79 1206 1218 1156 1245 0.52
Sequence Information
- Coding Sequence
- atgtctagtCGTCATGAGTCGTTCACTGCAGAATATTGTACGGGTGAAACAGTCACACTGTACAGTCAACAACACCATACAAGAATACATCTACAAACTCACGCCCAAGCAACACACAATCACATTCCATTAAatcaaaaAGGGGAACCAATTAAATTGCCAGATAACTTGGAGAGTTTGCCACGTGCTGAGCATTTTCCTGTTCAAAGACATCGCTGGAACACTAACGAGgaaatAGCAGCAATACTTATCAATTTTGAAAGACATAGCGAATGGCAGTCaaaagaagtaaaaataaggcCCAAGAGTGgttcaatgttattatatagcaGGAAAAAAGTGCGGTACAGGCGTGATGGATATTGTTGGAAAAAAAGGAAAGACGGCAAGACTACTCGCGAAGACCACATGAAGTTGAAAGTCCAAGGAACTGagtgtatttaCGGGTGCTATGTACATTCAGCGATACTTCCGACATTTCACAGAAGATGTTATTGGTTATTGCAAAATCCTGATATGGTGTTGGTACACTATTTAAATGTACCGTATCCGgatgacaataaattatcgGTAATTTCACCAAGCCTCGCATTGTGGGCTGATCGTAAAGAGTGGACGAAAGACGAATTACTATCTCAGTTAAAACCCATGTtttacgaGGAAGACCCTGACCTTAGCAACGAAATGGAAGTATCGACGGCTGAGTGCGTAGCCGCTATGGTCACACAGCTGATGGAGTGGCAGAAGAACGCCAGGGCTACGTTACTTAGTCGAACGCTTGAATGCGGATGTCCGGACTCAACGTGTGCGGATGGACAATCGTGCTCGCGCCCGATCAGACGGATTTCTCCATCAGATAGCAATCAGGTGTCATCAACGACTGGGAATCGATCGCGTCCCGGTACAATGTTGCTCACCAACCACCACGTTAATTCGTCCAGGACCACGATGAACACATTAATGATCGCTAATCACGCCAATCATAAGcaaGCACAAAGTGGACCAACCTCCTTGAACACTACAATGAATAACAACTTGTTGTCGAATTCCACAAGGGATTTTCGCAATCAACCACAACAACAGCAAccgcaacaacaacaaataatactcAAGCACGATTGCagagATAACAATCAAATGTTGAACAACAGACAACCACCAATCAATGTGACAGACAATAATCATATACCTACAACAATGATTTCATATAAACCACAAGGTTCAGACGAAGTGATTCACGTGTATACCGAAAAACAAACGTATCACACTTCACAAAATCAGGACGATAACACTGTACATCTGTTCCATGGACAAGATCACTTAAAACAACAGTCGGATCACGTTAAATCAGAATTCTATGATGTCACGTTAGATTTGTCCCACGACGACATACAACAGACGCTTTCAGCCAACATGCCAGTTTCGTGTGCCAATGCTGATCAGTTATTACGGTTGGATGACGaccatagtaataaaaatttagatggTACTGGAGACGATGTATTTGTAAGTCTTGATGCATTTGATATGCTTACTGACTTCCAAGAACTTGATATCCTAGAACATGCTACGCAACATGCTTCAAaTTTGGTTACGGAAATAGGAACAAACGCCGCGGATATGCAGCCACATGAGCAAACGCAATTAGACAATATGGATGTTCTACAAATAACCGATTACTGTCCTGAATGGGCATTTCCAGAGggagGTGTAAAGGTATTGATCACGGGTCCTTGGTTTTCTTCCTCATCATACACTGTTATGTTTGATACGATCACAGTTCCAAGCACTTTAATTCAAGGAGGTGTTTTAAGATGCTACTGTCCagCTCATGATATAGGCACCGTCACATTGCAAGTAGTCATTGATGGCAGGCCAGTATCAACTACCGCCATATTTGAATACCGTCAACACGAATTTCCGTTAACCATATCTTCGTTATCGATGGCACATACACCTTCTCTACTCAAGTTTCATTTGCTACAAAAACTTGACTCCGTCGAAGATTACTTACAGTCAAACAATCAACAAACAGACCAAccattaaaagataatattgtaatgttcaGCAAACCCAATTTTGAAGATCaacttgtaaattattgtgaaaaaatgaaacaattctCGTGGAAATCTGAATccgaatataatgttaaacaatTAGAAACTGAAACTACTATTTTACATATGGCAGCATTTTTGGGATATTCTAAACTCGTGTGCATACTACTTCAATGGAAATTAGAAAATGTATCAATGTTTTTGGAAATGGAAGTCAATGTTTCAAAGCAAGATCGTGAAGGATATACGCCTTTGatgtGGGCTTGTAAAAAAGGACACAAAGATACAGCGGTGTTACTGTGTCAATGGTATCAAActgttcaaaattcaaataacaattttaatcaagATTACTCTCAACCCGATATATTAGAATCCGTTAATCAGTATTTTAACGATTTCAATCAAAATCAGTATTGCAACAGTGAAAATTTAAGTAACGATGTATTTTTAAGGCCTGATGGaatcaataatgatgttaaaaaagaaatcaatCAAACAACCAACGAATCAAATAATCTAGTAACGTCACCTAATAAATCTGTTCCCATGTTATGTTCAAAAGAAGAAATAACCAAAtcagataaaaatgaaataaaaccaCAAGAAACTCAAGGTTCCAAAAGACCACTACCTAATAGTTTTTTCCAGACAGACGACTATTATGATCAATTCTGCAAACCATCGCTCTATTTCCCATCtattcaaaaGTTCCAAAAGAGTTTATTTCTTCCACTACAATCTCCTACATCAGACAGCGGAAATTCGTCAGAGAAATCACCAGTATTATCAAAgtctgattttataatttGCATGGTAACCGCGCTGGCCGATGGACCGGCGGACGGAGCCGTGGGTAGTGAAAACGATGGCAATGGTAACACGCGACCCAATGAACGTCAGAACGATGAACGAATCGAAGACGCAGTTCAAACACCTAAAGATTATGCTGAACACGgggAACATGATATTCGTGTTTTAACATTAGCTGAACAGTTCATAGCGGCTATGCCTGATCATATTAAGAATGAAAACGGGTCACATGGTAAAATTGTAGAATCATCAATCATTAGAATGGAAGTGCTTGACGATCCTCCGTCATCTGTGTCGTCGTGTTGTTTTGATACAAACTCTGAAATTAACACGGAATTCAACGAACACATTTATCATTATCGGCAAAAAGATCGAGAAATAGAAACACCTACGTCAAGTACCAGTTTAACCTTAAGTCCAGTATCCAGTGCATCACAATGTTCACCTGCTTCACCGCCACCGACTGCCGCAGATCTATGTGAATTTCTCCACGCCTCATCAAACAACCAATACTTTGAAAagaatttttcaaatcttaCACTGTCTGATTACGAACAACGTGAGTTATACGAGGCAGCTAAAACTATTCAGAAAGCATACAGGACGTACAAAAAAAGAGAAGAAGACAAAGAAATTTCAGCTGCTTCCATCATTCAAAACTATTATCGCCGTTACAAACAATATGCATATTACAAGCAGATGACAAAAGCTGCGAttctaattcaaaataagtatCGTGTATACAGAAGACATAAGCGGTTTAAAAATGACACTTCTCATTACATTAATAACACTTTCACTGTCATTAAaaaaaatcaaaatcaaaaacgtCAAAATCAAGCAGCTCgaaaaattcaacaatttatGAGACAGTCCAAGAATGGtacATCTCCTCCTGTCACTATCAACGAACGGACTTTTGGATCTCGTAAACGGGAAGCTAACGGCAATCACAACATGAAATATCCACCGACAAAAGTGGCCCAATACTCGACATTCAACCACCATTGA
- Protein Sequence
- MSSRHESFTAEYCTGETVTLYSQQHHTRIHLQTHAQATHNHIPLNQKGEPIKLPDNLESLPRAEHFPVQRHRWNTNEEIAAILINFERHSEWQSKEVKIRPKSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDMVLVHYLNVPYPDDNKLSVISPSLALWADRKEWTKDELLSQLKPMFYEEDPDLSNEMEVSTAECVAAMVTQLMEWQKNARATLLSRTLECGCPDSTCADGQSCSRPIRRISPSDSNQVSSTTGNRSRPGTMLLTNHHVNSSRTTMNTLMIANHANHKQAQSGPTSLNTTMNNNLLSNSTRDFRNQPQQQQPQQQQIILKHDCRDNNQMLNNRQPPINVTDNNHIPTTMISYKPQGSDEVIHVYTEKQTYHTSQNQDDNTVHLFHGQDHLKQQSDHVKSEFYDVTLDLSHDDIQQTLSANMPVSCANADQLLRLDDDHSNKNLDGTGDDVFVSLDAFDMLTDFQELDILEHATQHASNLVTEIGTNAADMQPHEQTQLDNMDVLQITDYCPEWAFPEGGVKVLITGPWFSSSSYTVMFDTITVPSTLIQGGVLRCYCPAHDIGTVTLQVVIDGRPVSTTAIFEYRQHEFPLTISSLSMAHTPSLLKFHLLQKLDSVEDYLQSNNQQTDQPLKDNIVMFSKPNFEDQLVNYCEKMKQFSWKSESEYNVKQLETETTILHMAAFLGYSKLVCILLQWKLENVSMFLEMEVNVSKQDREGYTPLMWACKKGHKDTAVLLCQWYQTVQNSNNNFNQDYSQPDILESVNQYFNDFNQNQYCNSENLSNDVFLRPDGINNDVKKEINQTTNESNNLVTSPNKSVPMLCSKEEITKSDKNEIKPQETQGSKRPLPNSFFQTDDYYDQFCKPSLYFPSIQKFQKSLFLPLQSPTSDSGNSSEKSPVLSKSDFIICMVTALADGPADGAVGSENDGNGNTRPNERQNDERIEDAVQTPKDYAEHGEHDIRVLTLAEQFIAAMPDHIKNENGSHGKIVESSIIRMEVLDDPPSSVSSCCFDTNSEINTEFNEHIYHYRQKDREIETPTSSTSLTLSPVSSASQCSPASPPPTAADLCEFLHASSNNQYFEKNFSNLTLSDYEQRELYEAAKTIQKAYRTYKKREEDKEISAASIIQNYYRRYKQYAYYKQMTKAAILIQNKYRVYRRHKRFKNDTSHYINNTFTVIKKNQNQKRQNQAARKIQQFMRQSKNGTSPPVTINERTFGSRKREANGNHNMKYPPTKVAQYSTFNHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167601;
- 90% Identity
- iTF_00940487;
- 80% Identity
- -