Rmai007468.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- CAMTA2
- Assembly
- GCA_003676215.3
- Location
- NC:47310160-47430339[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.6e-48 4.2e-44 148.4 2.9 3 116 69 180 67 180 0.98 2 3 0.64 7.4e+03 -3.9 0.0 24 44 670 690 659 697 0.76 3 3 0.097 1.1e+03 -1.3 0.0 34 63 1053 1084 1040 1096 0.62
Sequence Information
- Coding Sequence
- atgtccagtCGTCATGAGTCGTTCACTGCAGAATATTGTACGGGTGAAACAGTCACACTGTACAGTCAACAACACCACACGAGAATACATCTACAAACTCACGCCCACGCAAACAATCACATTCCATTAAatcaaaaAGGAGAACCAATTAAATTGCCAGATAACTTGGAGAGTTTGCCACGTGCTGAGCATTTTCCTGTTCAAAGACATCGCTGGAACACTAACGAGgaaATAGCagcaatattaatcaattttgaaAGACACAGTGAATGGCAGTCAAAAGAAGTAAAAATAAGGCCCAAAAGTGGttcaatgttattatacagCAGGAAGAAAGTGCGGTACAGACGTGATGGATATTGttggaaaaaaagaaaagacgGCAAGACTACTCGCGAAGACCATATGAAGCTGAAAGTCCAAGGAACTGAGtgcaTTTATGGGTGCTATGTACATTCAGCGATACTTCCGACATTTCACAGAAGATGTTATTGGTTATTACAAAATCCTGATATGGTATTGGTGCACTATTTGAATGTACCGTATCCGGACGACAACAAATTGTCGGTGATTTCGCCGAGCCTCGCACTGTGGGCTGATCGTAAAGAGTGGACGAAAGATGAATTACTATCTCAGTTGAAACCCATGTtttatgAGGAAGACCCTGACCTTAACAACGAAATGGAAGTATCGACGGCCGAGTGCGTAGCCGCCATGGTCACACAGCTGATGGAGTGGCAGAAGAACGCCAGGGCGACGCTACTTAGCCGAACGCTTGAATGCGGATGTCCGGACTCGACGTGTGCGGATGGACAATCGTGCTCGCGCCCGATCAGACGGATTTCGCCGTCGGATAGCAATCAGGTGTCATCGACGACTGGTAATCGATCGCGTCCCGGTACAATGTTACTCACCAACCATCACGTTAACTCGTCCAGGACCACGATGAACACATTACTGATCGCTAATCACGCCAATCATAAGcaGGCACAAAGTGGGCCAACCTCCTTGAACACTACAATGAACAACAACTTGTTGTCGAATTCCACAAGGGATTTTCGCAATCAACCACAACAGCAGCAaccacaacaacaacaaataattCTCAAGCACGATTgcagagataacaatcaaatattaagCAACAGACAACCGCCAATCAACGTGACGGACAATAATCATATACCTACTACAATGATTTCATATAAACCACAAGGTTCAGATGATGTAATTCACGTATATACCGAAAAACAAACGTATCATACTTCACAGAATCAAGACGAGCACGCTGTACATCTGTTTCACGGACAAGATCACCTAAAACAACAGTCGGATCACGTGAAATCGGAATTCTATGATGTCACGTTAGATTTGTCTCACGACGATATACAACAGACGCTTTCAGCCAACATGCCCGCTTCGTGTGCCAATGCTGATCAATTGTTACGattggATGACGaccatagtaataaaaatctagACGGTACCGGAGACGATGTATTTGTAAGTCTCGATGCGTTTGATATGCTTACTGACTTCCAAGAACTTGATATCCTAGAACATGCTACGCAACATGCTTCAAATCTGGTTACAGAAATAGGTACAAATGCAACGGATATGCAGCCACACGAGCAAACTCCATTAGACAATATGGACGTACTACAAATAACTGATTACTGTCCAGAATGGGCATTTCCAGAGggAGGTGTTAAGGTATTAATTACAGGTCCTTGGTTTTCTTCCTCGTCGTACACTGTTATGTTTGATACGATCACAGTTCCGAGCACTTTGATTCAAGGAGGTGTTTTACGATGCTATTGTCcagCTCATGATATAGGCACCGTCACATTGCAAGTAGTCATTGATGGCAGGCCAGTATCAACCACCGCCATATTTGAATACCGTCAACACGAATTCCCGCTAACCATATCCTCATTATCTATGTCACATACGCCTTCTCTACTCAAGTTTCATTTACTACAAAAACTCGACTCTATCGAAGATTACTTACAGTCAAATAATCAACTAACAGATCAACcattgaaggaTAGTATCGTTATGTTTAGCAAACCCAACTTTGAAGATCAGCTTGTAAATTACTGTGAAAAAATGAAACAGTTCTCGTGGAAATCTGAATCTGAATACAACGTTAAGCAATTAGAAACTGAAACCACTATTTTACATATGGCAGCATTTTTGGGATATTCTAAACTTGTGTGCATACTACTTCAATGGAAATTAGAAAATGTATCACTGTTTTTGGAAATGGAAGTCAATGTTTCAAAGCAAGATCGTGAAGGATATACGCCTCTGATGTGGGCTTGTAAAAAAGGACACAAAGATACAGCGGTGTTACTGTGTCAGTGGTATCAAACTGTTCAAAattcgaataataattttaatcaagatTACTCTCAACCCGATATATTAGAATCCGTTCATCagtATTTTAACGATTTCAATCAAAATCAGTATTGCAACAGTGAAATTTTAAGTAAcgatgtatttttaaggcctGATGCAATCAATAGTGACAAAAACTTGAAAGAAATCAATCAAACAGCCAACGAATCAAATAATCTAATAGCGCCGCCAAATAAATCTGTTGCCATGTTatGTGCAAAAGGAGAAACCAACAAATcggataaaaatgaaataaaaccaCAAGAAACTCAAGGTTCAAAAAGACCATTAcctaatagtttttttcaGGCAGATGACTATTATGATCAATTCTGTAAACCATCGCTCTACTTCCCATCTATTCAAAAATTTCAAAAGAGTTTGTTTCTTCCACTACAATCCCCTACATCGGATAGCGGAAATTCGTCGGAAAAATCACCAGTATTATCAAAgtctgattttattatttGCATGGTAACCGCGCTGGCCGATGGACCGGCGGACGGAGCCGTGGGTAGTGAGAACGATGGCAATGGTAACACGCGATCCGATGAACGTCAGAACGATGAACGAATCGAAGACGCTGTTCAAACACCCAAAGATCCCGCTGAACACGggGAGCATGATGTCCGTGTCTTGACATTAGCTGAACAATTCATAGCAGCTATGCCTGAACATATTAAGAATGAAAACGGATCACATGGTAAAATTGTAGAATCATCAATTATTACAATGGAAGTGCTTGACGATCCTCCGTCATCTGTGTCGTCGTGTTGTTTTGATACCAGCTCAGAAATTAATACAGAATTCAACGAACACGTTTATCATTATCGGCAAAAAGATCGAGAAATAGAAACACCCACGTCCAGTACCAGCTTAACCTTAAGTCCAGTGTCGAGTGCATCACAATGTTCACCTGCTTCACCGCCGCCGACTGCTGCAGATCTATGTGAATTTCTCCATGCTTCATCAAATAACCAATACTTTGAAAAGAATTTTTCAAACCTTACACTGTCCGATTATGAACAACGCGAGTTATATGAAGCAGCCAAAACTATTCAAAAGGCGTACAGGACGTACAAAAAAAGAGAAGAAGACAAAGAAATTTCAGCTGCTTCGattattcaaaactattatCGCCGTTACAAACAGTATGCATATTACAAGCAGATGACAAAAGCTGCGattctaattcaaaataagTATCGTGTATACAGAAGACATAAGCGGTTTAAAAAAGAAGTTCCTCATTACATTAATAACACGTTCACTGTCATTAAaaaaaatcaaaatcaaaaacgcCAAAATCAAGCAGCTCGGaaaattcaacaatttatGAGACAGTCCAAGAATGGtACGTCTCCTCCTGCCACAATCAATGAACGAACTTTTGGATCTCGTAAGCGGGAAGCTAACGGCAATCACAATATGAAATATCCACCGACAAAAGTGGCACAGTACTCGACACTCAACCACCATTGA
- Protein Sequence
- MSSRHESFTAEYCTGETVTLYSQQHHTRIHLQTHAHANNHIPLNQKGEPIKLPDNLESLPRAEHFPVQRHRWNTNEEIAAILINFERHSEWQSKEVKIRPKSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDMVLVHYLNVPYPDDNKLSVISPSLALWADRKEWTKDELLSQLKPMFYEEDPDLNNEMEVSTAECVAAMVTQLMEWQKNARATLLSRTLECGCPDSTCADGQSCSRPIRRISPSDSNQVSSTTGNRSRPGTMLLTNHHVNSSRTTMNTLLIANHANHKQAQSGPTSLNTTMNNNLLSNSTRDFRNQPQQQQPQQQQIILKHDCRDNNQILSNRQPPINVTDNNHIPTTMISYKPQGSDDVIHVYTEKQTYHTSQNQDEHAVHLFHGQDHLKQQSDHVKSEFYDVTLDLSHDDIQQTLSANMPASCANADQLLRLDDDHSNKNLDGTGDDVFVSLDAFDMLTDFQELDILEHATQHASNLVTEIGTNATDMQPHEQTPLDNMDVLQITDYCPEWAFPEGGVKVLITGPWFSSSSYTVMFDTITVPSTLIQGGVLRCYCPAHDIGTVTLQVVIDGRPVSTTAIFEYRQHEFPLTISSLSMSHTPSLLKFHLLQKLDSIEDYLQSNNQLTDQPLKDSIVMFSKPNFEDQLVNYCEKMKQFSWKSESEYNVKQLETETTILHMAAFLGYSKLVCILLQWKLENVSLFLEMEVNVSKQDREGYTPLMWACKKGHKDTAVLLCQWYQTVQNSNNNFNQDYSQPDILESVHQYFNDFNQNQYCNSEILSNDVFLRPDAINSDKNLKEINQTANESNNLIAPPNKSVAMLCAKGETNKSDKNEIKPQETQGSKRPLPNSFFQADDYYDQFCKPSLYFPSIQKFQKSLFLPLQSPTSDSGNSSEKSPVLSKSDFIICMVTALADGPADGAVGSENDGNGNTRSDERQNDERIEDAVQTPKDPAEHGEHDVRVLTLAEQFIAAMPEHIKNENGSHGKIVESSIITMEVLDDPPSSVSSCCFDTSSEINTEFNEHVYHYRQKDREIETPTSSTSLTLSPVSSASQCSPASPPPTAADLCEFLHASSNNQYFEKNFSNLTLSDYEQRELYEAAKTIQKAYRTYKKREEDKEISAASIIQNYYRRYKQYAYYKQMTKAAILIQNKYRVYRRHKRFKKEVPHYINNTFTVIKKNQNQKRQNQAARKIQQFMRQSKNGTSPPATINERTFGSRKREANGNHNMKYPPTKVAQYSTLNHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167601;
- 90% Identity
- iTF_00940487;
- 80% Identity
- -