Rpad022313.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Rhopalosiphum padi
Gene Symbol
CAMTA2
Assembly
None
Location
scf7180000008212.689069:F:2457:1084142:F:537:1197486:F:884380-915131[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.9e-35 1e-30 106.4 1.6 40 116 2 76 1 76 0.97
2 3 0.4 1.1e+04 -3.3 0.0 24 44 566 586 554 603 0.75
3 3 0.053 1.4e+03 -0.5 0.0 34 63 949 980 935 993 0.63

Sequence Information

Coding Sequence
ATGTTATTATACAGCAGGAAGAAAGTGCGGTACAGACGTGATGGATATTGTTGGAAAAAAAGAAAAGACGGCAAGACTACTCGCGAAGACCATATGAAGCTGAAAGTCCAAGGAACTGAGTGCATTTATGGGTGCTATGTACATTCAGCGATACTTCCGACATTTCACAGAAGATGCTATTGGTTATTACAAAATCCTGATATGGTATTGGTGCACTATTTGAATGTACCGTATCCGGACGACAACAAATTGTCGGTGATTTCGCCGAGCCTCGCGCTGTGGGCTGATCGTAAAGAGTGGACGAAAGACGAATTACTATCTCAGTTGAAACCCATGTTTTACGAGGAAGACCCTGACCTTAGCAACGAAATGGAAGTATCGACGGCCGAGTGCGTAGCCGCCATGGTCACACAGCTGATGGAGTGGCAGAAGAACGCCAGGGCGACGCTACTTAGCCGAACGCTTGAATGCGGATGTCCGGACTCGACGTGTGCGGATGGACAATCGTGTTCGCGCCCGATCAGACGGATTTCGCCGTCGGATAGCAATCAGGTGTCATCGACAACTGGGAATCGATCACGTCCCGGTACAATGTTACTCACCAACCATCACGTTAACTCGTCTAGGACCACGATGAACACATTAATGATCGCTAATCACGCCAATCATAAGCAGGCACAAAGTGGGCCAACCTCCTTGAACACCACAATGAACAACAACTTGTTGTCGAATTCCACAAGGGATTTTCGCAATCAACCACAACAGCAGCAACCACAACAACAACAAATAATTCTCAAGCACGATTGCAGAGATAACAATCAAATATTAAGCAACAGACAACCGCCAATCAACGTGACGGACAATAATCATATACCTACTACAATGATTTCATATAAACCACAAGGTTCAGACGAAGTAATTCACGTATATACCGAAAAGCAAACGTATCACACTTCACAGAATCAAGACGAGCACGCTGTACATCTGTTCCACGGACAAGATCACCTAAAACAACAGTCGGACCACGTGAAATCGGAATTCTATGATGTCACGTTAGATTTGTCGCACGACGACATACAACAGACGCTTTCAGCCAACATGCCCGCTTCGTGTGCCAATGCTGATCAATTGTTACGGTTGGATGATGACCATAGTAATAAAAATCTAGACGGTACCGGAGACGATGTATTTGTAAGTCTCGATGCGTTTGATATGCTTACTGACTTCCAAGAACTTGATATCCTAGAACATGCTACGCAACATGCTTCAAATCTGGTTACAGAAATAGGTACAAATGCAGCGGATATGCAGCCACACGAGCAAACTCAATTAGACAATATGGACGTACTACAAATAACTGATTACTGTCCAGAATGGGCATTTCCAGAGGGAGGTGTTAAGGTATTAATTACAGGTCCTTGGTTTTCTTCTTCGTCGTACACTGTTATGTTTGATACGATCACAGTTCCGAGCACTTTGATTCAAGGAGGTGTTTTACGATGCTATTGTCCAGCTCATGATATAGGCACCGTCACATTGCAAGTAGTCATTGATGGCAGGCCAGTATCAACCACCGCCATATTTGAATACCGTCAACACGAATTCCCGCTAACTATATCCTCATTATCTATGTCACATACCCCTTCTCTACTCAAGTTTCATTTGCTACAAAAACTCGACTCCATTGAAGATTACTTACAGTCAAACAATCAACAAACAGATCAACCATTGAAGGATAGTATCGTTATGTTTAGCAAACCCAACTTTGAAGATCAGCTTGTAAATTACTGTGAAAAAATGAAACAGTTCTCATGGAAATCTGAATCTGAATACAACATTAAGCAATTAGAAACTGAAACCACTATTTTGCATATGGCAGCATTTTTGGGATATTCTAAACTTGTGTGTATACTACTTCAATGGAAATTAGAAAATGTATCACTGTTTTTGGAAATGGAAGTCAATGTTTCAAAGCAAGATCGTGAAGGATATACGCCTCTGATGTGGGCTTGTAAAAAAGGACACAAAGATACAGCGGTGTTACTGTGTCAGTGGTATCAAACTGTTCAAAATTCTAATAATAATTTTAATCAAGATTACTCTCAACCCAATATATTAGAATCCGTTCATCAGTATTTTAACGATTTCAATCAAAATCAGTATTGCAACAGTGAAAATTTAAGTAACGATGTATTTTTAAGGCCTGATGGAATCAATAGTGACAAAAACTTGAAAGAAATCAATCAAACAACCAACGAATCAAATAATCTAATAGCACCGCCAAATAAATCTGTTACCATGTTATGTGCAAAAGGAGAAACCAACAAATCGGATAAAAATGAAATAAAACCACAAGAAACTCAAGGTTCAAAAAGACCATTACCTAATAGTTTTTTTCAGGCAGATGACTATTATGATCAATTCTGTAAACCATCGCTCTACTTCCCGTCTATTCAAAAATTTCAAAAGAGTTTGTTTCTTCCACTACAATCCCCTACATCGGATAGCGGAAATTCGTCGGAAAAATCACCAGTATTATCAAAGTCTGATTTTATTATTTGCATGGTAACCGCGCTGGCCGATGGACCGGCGGACGGAGCCGTGGGTAGTGAGAACGATGGCAATGGTAACACGCGATCCGATGAACGTCAGAACGATGAACGAATCGAAGACGCTGTTCAAACACCCAAAGATCCCGCTGAACACGGGGAGCATGATGTCCGTGTCTTAACATTAGCTGAACAATTCATAGCAGCTATGCCTGAACATATTAAGAATGAAAACGGATCACACGGTAAAATTGTAGAATCATCAATTATTACAATGGAAGTGCTTGACGATCCTCCGTCATCTGTGTCGTCGTGTTGTTTTGATACCAACTCAGAAATTAATACAGAATTCAACGAACACGTTTATCATTATCGGCAAAAAGATCGAGAAATAGAAACACCCACGTCCAGTACCAGCTTAACCTTAAGTCCAGTGTCGAGTGCATCACAATGCTCACCTGCTTCACCGCCACCGACTGCTGCAGATCTATGTGAATTTCTCCATGCTTCATCAAATAACCAATACTTTGAAAAGAATTTTTCGAACCTTACACTGTCCGATTATGAACAACGCGAGTTATATGAGGCAGCCAAAACTATTCAAAAGGCGTACAGGACGTATAAAAAAAGAGAAGAAGACAAGGAAATTTCAGCTGCTTCGATTATTCAAAACTATTATCGCCGTTACAAACAGTATGCATATTACAAGCAGATGACAAAAGCTGCGATTCTAATTCAAAATAAGTATCGTGTATACAGAAGACATAAGCGGTTTAAAAAAGAAGTTCCTCATTACATTAATAACACGTTCACTGTCATTAAAAAAAATCAAAATCAAAAACGCCAAAATCAAGCAGCTCGAAAAATTCAACAATTTATGAGACAGTCCAAGAATGGTACGTCTCCTCCTGCCACAATCAACGAACGAACTTTTGGATCTCGTAAGCGGGAAGCTAACGGCAATCACAATATGAAATATCCACCGACAAAAGTGGCACAGTACTCGACACTCAACCACCATTGA
Protein Sequence
MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDMVLVHYLNVPYPDDNKLSVISPSLALWADRKEWTKDELLSQLKPMFYEEDPDLSNEMEVSTAECVAAMVTQLMEWQKNARATLLSRTLECGCPDSTCADGQSCSRPIRRISPSDSNQVSSTTGNRSRPGTMLLTNHHVNSSRTTMNTLMIANHANHKQAQSGPTSLNTTMNNNLLSNSTRDFRNQPQQQQPQQQQIILKHDCRDNNQILSNRQPPINVTDNNHIPTTMISYKPQGSDEVIHVYTEKQTYHTSQNQDEHAVHLFHGQDHLKQQSDHVKSEFYDVTLDLSHDDIQQTLSANMPASCANADQLLRLDDDHSNKNLDGTGDDVFVSLDAFDMLTDFQELDILEHATQHASNLVTEIGTNAADMQPHEQTQLDNMDVLQITDYCPEWAFPEGGVKVLITGPWFSSSSYTVMFDTITVPSTLIQGGVLRCYCPAHDIGTVTLQVVIDGRPVSTTAIFEYRQHEFPLTISSLSMSHTPSLLKFHLLQKLDSIEDYLQSNNQQTDQPLKDSIVMFSKPNFEDQLVNYCEKMKQFSWKSESEYNIKQLETETTILHMAAFLGYSKLVCILLQWKLENVSLFLEMEVNVSKQDREGYTPLMWACKKGHKDTAVLLCQWYQTVQNSNNNFNQDYSQPNILESVHQYFNDFNQNQYCNSENLSNDVFLRPDGINSDKNLKEINQTTNESNNLIAPPNKSVTMLCAKGETNKSDKNEIKPQETQGSKRPLPNSFFQADDYYDQFCKPSLYFPSIQKFQKSLFLPLQSPTSDSGNSSEKSPVLSKSDFIICMVTALADGPADGAVGSENDGNGNTRSDERQNDERIEDAVQTPKDPAEHGEHDVRVLTLAEQFIAAMPEHIKNENGSHGKIVESSIITMEVLDDPPSSVSSCCFDTNSEINTEFNEHVYHYRQKDREIETPTSSTSLTLSPVSSASQCSPASPPPTAADLCEFLHASSNNQYFEKNFSNLTLSDYEQRELYEAAKTIQKAYRTYKKREEDKEISAASIIQNYYRRYKQYAYYKQMTKAAILIQNKYRVYRRHKRFKKEVPHYINNTFTVIKKNQNQKRQNQAARKIQQFMRQSKNGTSPPATINERTFGSRKREANGNHNMKYPPTKVAQYSTLNHH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01167601;
90% Identity
iTF_00940487;
80% Identity
-