Mrus008415.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Machimus rusticus
Gene Symbol
nfxl1
Assembly
GCA_951509405.1
Location
OX608050.1:6148503-6155332[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1.5 3.2e+04 -3.7 1.1 15 19 169 173 168 173 0.83
2 20 0.09 1.9e+03 0.2 0.4 4 10 204 210 203 210 0.96
3 20 2.9e-08 0.00063 20.9 16.6 1 19 218 235 218 235 0.99
4 20 1.5 3.3e+04 -3.7 0.8 5 10 260 265 260 265 0.90
5 20 7.3e-07 0.016 16.5 16.5 1 19 271 290 271 290 0.97
6 20 1.4 3e+04 -3.6 1.8 6 10 315 319 314 319 0.89
7 20 1.1e-09 2.4e-05 25.4 13.9 1 19 325 343 325 343 0.99
8 20 1.7 3.6e+04 -3.9 0.8 6 10 368 372 367 374 0.54
9 20 2e-07 0.0043 18.3 14.8 1 18 378 395 378 396 0.97
10 20 2 4.3e+04 -5.0 2.3 5 10 419 424 419 424 0.91
11 20 4.2e-07 0.0091 17.2 16.5 1 18 430 447 430 448 0.98
12 20 2.1e-08 0.00045 21.4 12.1 3 18 459 474 457 475 0.91
13 20 0.23 5e+03 -1.1 2.1 5 10 503 508 503 508 0.93
14 20 1.6 3.5e+04 -3.8 0.5 9 12 513 516 512 518 0.72
15 20 0.16 3.4e+03 -0.6 6.3 10 19 522 531 519 531 0.90
16 20 0.0025 55 5.1 5.0 3 12 544 553 534 553 0.83
17 20 0.57 1.2e+04 -2.4 0.7 6 10 614 618 613 618 0.90
18 20 1.1e-06 0.024 15.9 7.7 1 12 624 635 624 635 0.96
19 20 0.0027 58 5.1 11.0 3 18 664 679 662 680 0.94
20 20 2.3e-06 0.049 14.9 13.2 1 16 731 745 731 751 0.87

Sequence Information

Coding Sequence
ATGTCTGGCAACGCTTGGAAAATCTCAGCTGAACCGACAAAACCAAAGAATAACAAGAGTCATAAGAAAGTCGAAAATGTTAACCAGttagcaattaaaaaattcgagGAGGTCCAGAATAGAAATATTGAGAAAGCCAAAGCTTACACGGGGAATTATAGTTCGAGCTCGGACGAGGAGGAAGAATTGAACACCGGCTATATTCTAGATAAACTATTCAGAGGGTATTCCGGTGAGCGGAGTCAACTTTCTAAGACTGAAATTTTCTTAGAGAACTTCTTACAGTCTGGATCAGCTATTTGCCTAATTTGCATTGGGACTGTTAAACGAAACGAATCTATTTGGTCCTGTAAGAgctgcttttgttttttccacCTCCAGTGTATTAAACGCTGGGGCAATGACTCCATTTCACAGCAGAAGTGCAGCCTAAATGAAGAGCAAAGTTATTACAACAATTTGGGAGAGTACGTGCCTAAGAAAGTGAAGGCGATTAAGTGGCATTGCCCCAAGTGCCGGAAGGAGTACAACCCCGAGGATATTCCCAAAATATACACTTGCTTCTGCGAGAAAGAAATCAATCCCAACCCTCATCCATGGACGATTCCTCATTCGTGTGGAGAGCTATGTGAAAAGTATCTTGTGCCTGACTGTGGACATAGGTGTCTCCTTCTCTGCCATCCTggACCATGTCCGCCTTGCCCGCAGAGTGTTTTTACTTCTTGTAAATGTGGACAATCTAAGCCGAAGTCTATCAGATGTCTTCAGAAGACATGGACATGCGAGTTTAAATGCCAAAGCTTTTTAGCTTGCGGGATTCACAAATGTGGCAAAGAGTGCCATAGTCCAGGAGAGTGCCCTCCTTGCACAAAAAAGAGTAAACAGAGATGCCAATGCGGAGCTGAAATTTCTGAAAGAAGTTGTTCCGAATTATTATGGCAGTGTAAGAAgGTTTGCAATAAACCTTACGACTGTGGCGTGCAcaaatgcaaacaaatttgTCACTCTGGTGATTGTGGAAGTTGTCCATTAGGACTTCCAAGATCTTGTCCATGCGGAAAAactaaaagcATTGCACCATGCAGTGAGGTCATAGATACTTGTGGGGATACATGCCAAAAAATTTTGGCTTGTGGACTCCACCATTGTGCACAAAGATGTCACAAGGGAGAATGCAGTCCATGTCTGACCTTGATAGAAAAGAAATGCCGTTGTGGACTTCGGACAAAGGAACAACCATGCTCTCGTTTGTTTACCTGTGAAACAAAGTGTAAGCAAATGAGAGATTGTGGAAAGCATATGTGCAACAAGAAATGCTGTGACGGCCAATGTCCACCCTGCGACAAAATATGTTCGAAAACTCTTTCAtgtaaaaaacataaatgtaaGTCTGTCTGCCACGATGGTCCTTGTTATCCATGCGATTTAAAATCGCAAGTTAAATGTCGATGCAACTATACGTCGATAACAGTGCCCTGTGGAAGGGAGAAAAAGACCCGTCCTCCAAAATGTCAACAGCCTTGCAGatTTCCCTCAAAATGTCACCACCAAAATCCTCATAATTGTCACCTGTACGAGTGTCCACCATGCACTCAAATGTGTGGTCTAAAAAACGATGTATCCAACTGTAATCATCCTTGTGAAGCTAAGTGCCACGATGCAGTAAAAGTTGCTGTAAACGGCAATAATCAAAAACCAGTTAGCATTTGGGACTGGAACACGGAGAAAtttgaaataaaaaagatgccGCATCCCCGATGTGAAGTTAAAGTAAGGGTAACATGTATTGGAGGTCATGAGACAGCCCTTTGGCCCTGTTGGAACTCAAAGCCTAGCTCTTGCGAGAGGATATGCGGGCGAGTTTTGAAATGCGGTAATCATACTTGCCAGCGAATTTGTCATACTCTTCCTAATATAGAggataaaaatgAACAAGAAGGCTGCATTCCTTGTGAACAAGAATGTAATATACCGAGGGGTGGTGGATGTATTCATCCATGTCGAAAACGTTGCCATTTAGCACCGTGTGCACCTTGTTTGGTAACTATCAAGGCAAATTGCCATTGTGGCCTTGGTCAAGTCTACTACAAGTGTTCTGAATACAACCGAACGGATCTCGATCCTCACTCATTGGAAATATTTCGTAACCAACTTAGAAACTGCGGAAACAGATGCATTAAGAAtTATGCTTGTGGGCACCGGTGCACATCGACGTGTCACGCAGGTGAATGTCCCGATCCAGAAAAATGCAAGAAAaaggttaaaatttattgcaagtGTAAAAACTTGAAAGCAGAAATTTCTTGCGAAAAACATCGTAATGGATTCGTTGTTATCCCTTGTGACGATGTTTGTGCTCAAAAGATGAAGACTGAAGAACGAATTAAACGTGAGGCAGAAGAAAAACAACGAAAGTTAGAAGAGGAGAAAAATCGTTTGGAATTGGAACAATTCGAAAAGAAATTTGGAAAGAAAAAGCACCGCGAACGTAAGGTCTTGGAGGAAACTCCAAAAGAAAGAAGTTTCAAACTTCTCTGGGCAGTGGCTGGAACTGCATCAATAATATTTTCCGTAGTTTTAGCcacttactttttaaaatga
Protein Sequence
MSGNAWKISAEPTKPKNNKSHKKVENVNQLAIKKFEEVQNRNIEKAKAYTGNYSSSSDEEEELNTGYILDKLFRGYSGERSQLSKTEIFLENFLQSGSAICLICIGTVKRNESIWSCKSCFCFFHLQCIKRWGNDSISQQKCSLNEEQSYYNNLGEYVPKKVKAIKWHCPKCRKEYNPEDIPKIYTCFCEKEINPNPHPWTIPHSCGELCEKYLVPDCGHRCLLLCHPGPCPPCPQSVFTSCKCGQSKPKSIRCLQKTWTCEFKCQSFLACGIHKCGKECHSPGECPPCTKKSKQRCQCGAEISERSCSELLWQCKKVCNKPYDCGVHKCKQICHSGDCGSCPLGLPRSCPCGKTKSIAPCSEVIDTCGDTCQKILACGLHHCAQRCHKGECSPCLTLIEKKCRCGLRTKEQPCSRLFTCETKCKQMRDCGKHMCNKKCCDGQCPPCDKICSKTLSCKKHKCKSVCHDGPCYPCDLKSQVKCRCNYTSITVPCGREKKTRPPKCQQPCRFPSKCHHQNPHNCHLYECPPCTQMCGLKNDVSNCNHPCEAKCHDAVKVAVNGNNQKPVSIWDWNTEKFEIKKMPHPRCEVKVRVTCIGGHETALWPCWNSKPSSCERICGRVLKCGNHTCQRICHTLPNIEDKNEQEGCIPCEQECNIPRGGGCIHPCRKRCHLAPCAPCLVTIKANCHCGLGQVYYKCSEYNRTDLDPHSLEIFRNQLRNCGNRCIKNYACGHRCTSTCHAGECPDPEKCKKKVKIYCKCKNLKAEISCEKHRNGFVVIPCDDVCAQKMKTEERIKREAEEKQRKLEEEKNRLELEQFEKKFGKKKHRERKVLEETPKERSFKLLWAVAGTASIIFSVVLATYFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01461579; iTF_01256782; iTF_00936943; iTF_01184210; iTF_01050067;
90% Identity
iTF_01461579;
80% Identity
-