Matr019327.1
Basic Information
- Insect
- Machimus atricapillus
- Gene Symbol
- nfxl1
- Assembly
- GCA_933228755.1
- Location
- CAKOFS010000107.1:38642-48056[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.5 2.7e+04 -3.7 1.1 15 19 169 173 168 173 0.83 2 18 0.089 1.6e+03 0.2 0.4 4 10 204 210 203 210 0.96 3 18 2.9e-08 0.00053 20.9 16.6 1 19 218 235 218 235 0.99 4 18 4.2e-06 0.077 14.0 17.2 1 19 271 290 271 290 0.97 5 18 1.4 2.5e+04 -3.6 1.8 6 10 315 319 314 319 0.89 6 18 1.1e-09 2.1e-05 25.4 13.9 1 19 325 343 325 343 0.99 7 18 0.91 1.7e+04 -3.0 0.5 1 7 368 373 367 375 0.49 8 18 3.3e-07 0.006 17.6 15.9 1 19 378 396 378 396 0.98 9 18 7.8e-06 0.14 13.2 14.5 1 18 430 447 430 448 0.96 10 18 2.1e-08 0.00038 21.4 12.1 3 18 459 474 457 475 0.91 11 18 0.23 4.2e+03 -1.1 2.1 5 10 503 508 503 508 0.93 12 18 1.6 2.9e+04 -3.8 0.5 9 12 513 516 512 518 0.72 13 18 0.095 1.7e+03 0.1 6.3 10 19 522 531 519 531 0.91 14 18 0.17 3.1e+03 -0.7 4.3 3 12 544 553 534 553 0.85 15 18 0.57 1e+04 -2.4 0.7 6 10 614 618 613 618 0.90 16 18 5.7e-07 0.01 16.8 6.6 1 11 624 634 624 635 0.96 17 18 0.017 3.1e+02 2.5 12.7 3 18 664 679 663 680 0.94 18 18 1.6e-06 0.029 15.4 13.8 1 16 731 745 731 751 0.87
Sequence Information
- Coding Sequence
- ATGTCTGGAAATGCTTGGAACATCCCAGCGGAATCGAAAAAACCAAAGAATAGTAAGAGTCATAAGAAGCTTGAAAATGCTAACCCGTTGGCAATTAAGAAATTCGAGGAGGTCCAAAAGAAAAATATTGAAAAAGCCAAAGCTTACACGGGAAATTATAGTTCGAGCTCAGATGAGGAGGAAGAATTGAACACCGGCTATATTCTAGGTGAGCTGTTCAAAGGGTATTCCGGTGAGCGGAGTCAACTCAATAAGACTGAAACTTTCTTGGAGAACTTCTTGCAATCTGGATCAGCTATTTGCCTAATTTGCATTGGGACTGTCAAGCGAAACGAGTCTATTTGGTCCTGTAAGAGCTGCTTTTGTTTTTTCCATCTTCAGTGTATAAAACGCTGGGGCAATGATTCCATTTCTCAGCAGAAGTGCAGTCAGAATGAAGAGCAAAGCTATTACAACAATTTGGGAGAATATGTGCCTAAGAAATTGAAGGTGATTAGGTGGCATTGCCCCAAGTGCCGGAAGGAGTACAACCCCGAGGATATTCCCAAAATATACACTTGCTTCTGCGAGAAGGAAGTCAATCCCAACCCTCATCCATGGACAATTCCTCATTCGTGTGGAGAGCTGTGTGAAAAATATCTTGTGCCTGACTGTGGACACAGGTGTCTCCTTCTCTGCCACCCTGGACCATGTCCGCCTTGCCCGCAGAGTGTTTCCACTTCTTGCAAATGTGGACAATCTAAGCCAAAGTCTATCAGATGTTTCAACAAGACATGGACGTGCGCCTTCAAATGCCAAAGCTTCTTAGCTTGCGGAATTCACAGATGTGGTAAAGGATGCCACAGTCCAGGAGAGTGCCCTCCTTGCACAAAAAAGAGTAAGCAGAGATGCCAATGCGGAGCGGAAATTTCTGAAAGAAGTTGTTCCGAATTATTATGGCAGTGTAAGAAGGTCTGTAATAAACCTTACGGCTGTGGTGTACACAAATGCAAACAAATTTGTCACTCTGGTGATTGTGGAAGTTGTCCATTAGGACTGCCAAGATCTTGTCCATGCGGAAAAACTAAAAGCATTGCACCATGCAGTGAGGTCATAGATACTTGTGGGGATACATGTCAAAAACTTTTGGCTTGTGGACTCCACCACTGTGCACAAAGATGTCACAAGGGAGAATGCAGTCCATGTCGGATCTTGATAGAAAAGAAATGCCGTTGTGGACTTCGGACAAAGCAACAGCCGTGTTCTCGTTTGTTTGTCTGTGAAACAAAATGTAAGCAAATGAGAGATTGTGCAAAGCATATGTGCAACAAAAAATGCTGTGACGGCCAATGTCCACCCTGCGATAAAATATGTTCGAAAACTCTTTCATGTAAGAAACATAAATGTAAATCTGTCTGCCACGATGGTCCTTGTTATCCATGCGATTTAAAATCGCAAGTTAAATGTCGATGCAGCTATACTTCAATAACAGTGCCTTGTGGAAGAGAGAAAAAGACTCGTCCTCCAAAATGTCAACAGCCATGCAGATTTCCTTCAAAATGTCACCACCAAAATCCACATAATTGTCATCTGTACGATTGTCCACCATGCACGCAAAGGTGTGGCCTAAAGAACGATGTATCCAACTGTGAACATCCTTGTGGAGCTAGGTGCCACGATGCAGTAAAAGTTGCAAAAAACGCTAACACTCAAAAACCAGTTAGCATTTGGGACTGGAACATGGAAAAATTTGAAATAAAGAAGATGCCACATCCGCGATGTGAAGTTAAAGTAATGATAACATGCATTGGAGGTCATGAGACAGCCCTTTGGCCCTGTTGGAACTCAAAGCCCAGCTCTTGTGAGAGGATATGCGGCCGAGTTTTGAAATGCGGGAATCATACTTGCCAGCGGATTTGCCATGCTGTTTCTAATATAGAGGATAAAAATGAACAAGAAGGCTGCTTTTCTTGTGAGCGAGAATGTAATATACCAAGAGCTGATGGATGCATTCATCCATGTCGAAAACGTTGCCATTTACCACCGTGCGCGCCTTGTCTGGTTACTATCAAGACGAATTGCCATTGTGGCCTTGGTCAAGTCTACTACAAGTGTTCTGAATACAACAGAACGGATCTCGATCCTCATTCATTGGAAGTATTTCGCCACCAACTTAAAAACTGTGGAAACAGATGCATTAAGAATTACGCTTGTGGGCACCGATGCACATCGACATGTCATGAAGGTGAATGTCCCGACCCAGAAAAATGCAAGAAAAAGGTTAAAATTTATTGTGAGTGTAAAAACTTGAAAGCAGAAATTACTTGCGAAAAGCATCGTAATGGATTCATTATTCCTTGTGACGATGTTTGTGCTCAAAAGATGAAGATTGAAGAACGAATTAAGCGAGAGGCAGAGGAAAAACAACGAAAATTAGAAGAGGAGAAAAATCGTTTGGAATTGGAACAATTCGAAAAGAAATTTGGAAAGAAAAAACACCGCGAACGCAAGGTCTTGGAGGAAATTCCAAAAGAAAAAAATTTCAAACTTCTCTGGGTAGTGTTTGGAACTGCATCAGTAATATTTTCCATAGTTTTAGCCACTTATTTTTTTAAGTGA
- Protein Sequence
- MSGNAWNIPAESKKPKNSKSHKKLENANPLAIKKFEEVQKKNIEKAKAYTGNYSSSSDEEEELNTGYILGELFKGYSGERSQLNKTETFLENFLQSGSAICLICIGTVKRNESIWSCKSCFCFFHLQCIKRWGNDSISQQKCSQNEEQSYYNNLGEYVPKKLKVIRWHCPKCRKEYNPEDIPKIYTCFCEKEVNPNPHPWTIPHSCGELCEKYLVPDCGHRCLLLCHPGPCPPCPQSVSTSCKCGQSKPKSIRCFNKTWTCAFKCQSFLACGIHRCGKGCHSPGECPPCTKKSKQRCQCGAEISERSCSELLWQCKKVCNKPYGCGVHKCKQICHSGDCGSCPLGLPRSCPCGKTKSIAPCSEVIDTCGDTCQKLLACGLHHCAQRCHKGECSPCRILIEKKCRCGLRTKQQPCSRLFVCETKCKQMRDCAKHMCNKKCCDGQCPPCDKICSKTLSCKKHKCKSVCHDGPCYPCDLKSQVKCRCSYTSITVPCGREKKTRPPKCQQPCRFPSKCHHQNPHNCHLYDCPPCTQRCGLKNDVSNCEHPCGARCHDAVKVAKNANTQKPVSIWDWNMEKFEIKKMPHPRCEVKVMITCIGGHETALWPCWNSKPSSCERICGRVLKCGNHTCQRICHAVSNIEDKNEQEGCFSCERECNIPRADGCIHPCRKRCHLPPCAPCLVTIKTNCHCGLGQVYYKCSEYNRTDLDPHSLEVFRHQLKNCGNRCIKNYACGHRCTSTCHEGECPDPEKCKKKVKIYCECKNLKAEITCEKHRNGFIIPCDDVCAQKMKIEERIKREAEEKQRKLEEEKNRLELEQFEKKFGKKKHRERKVLEEIPKEKNFKLLWVVFGTASVIFSIVLATYFFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00937704;
- 90% Identity
- -
- 80% Identity
- -